mRNA_Ecto-sp13_S_contig6599.17441.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6599.17441.1
Unique NamemRNA_Ecto-sp13_S_contig6599.17441.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: D8LGA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA2_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 1.780e-189
Identity = 267/280 (95.36%), Postives = 271/280 (96.79%), Query Frame = 1 
Query:    1 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFAFDETAGSR-SVLSLTA 837
            DKDNLFLSKVYAPVDEETTRACEVVG LPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDL  ALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKL+AFGYQFTD TKPYVTYYVLDK+GKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQ+PF FDETAGSR  +L L A
Sbjct:   20 DKDNLFLSKVYAPVDEETTRACEVVGVLPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLIDALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLYAFGYQFTDSTKPYVTYYVLDKNGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQIPFVFDETAGSRMGILRLDA 299
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A0A6H5KG96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG96_9PHAE)

HSP 1 Score: 519 bits (1336), Expect = 1.320e-184
Identity = 264/312 (84.62%), Postives = 265/312 (84.94%), Query Frame = 1 
Query:    1 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQ----------------------------------------FTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFAFDETAGSR 816
            DKDN FLSKVYAPVDEETTRACEVVG LPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAV +KLGDMASLVGIPKMLLYSLKVKLGIIPDL  ALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQ                                        FTD TKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPF FDETAGSR
Sbjct:   19 DKDNPFLSKVYAPVDEETTRACEVVGVLPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVVIKLGDMASLVGIPKMLLYSLKVKLGIIPDLIDALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQVPAIDPMFDANTMCLFVDELENLCLYWSVCSPCLLFSPRQFTDATKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFVFDETAGSR 330
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: D8LGA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA3_ECTSI)

HSP 1 Score: 514 bits (1324), Expect = 1.530e-179
Identity = 253/280 (90.36%), Postives = 264/280 (94.29%), Query Frame = 1 
Query:    1 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFAFDETAGSR-SVLSLTA 837
            DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGT+ARNGPNPKFKPKAGYHW+DGDGMVHSV+IKAGKATYSNRYVRTEKLR EEEAGE VA+  GDMAS+V IPKMLL SLKVKLGI+PDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIG+ATFDGQMKAPFTAHPKKDPDTGKLHAFGYQF D TKPYVTYYVLD +GKLERQFPIV +KRPIMMHDFAITKNYAVFLDFPLLFKPEL+L G+VP AFDETAGSR  VL L A
Sbjct:   20 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTLARNGPNPKFKPKAGYHWYDGDGMVHSVQIKAGKATYSNRYVRTEKLRAEEEAGEPVAMNFGDMASMVVIPKMLLSSLKVKLGIVPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGQATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFKDNTKPYVTYYVLDTNGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDFPLLFKPELILAGKVPIAFDETAGSRMGVLRLDA 299
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A0A6H5KSQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ0_9PHAE)

HSP 1 Score: 511 bits (1317), Expect = 1.140e-178
Identity = 252/280 (90.00%), Postives = 261/280 (93.21%), Query Frame = 1 
Query:    1 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFAFDETAGSR-SVLSLTA 837
            DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGT+ARNGPNPKFKPKAGYHW+DGDGMVHSVRIK GKATYSNRYVRTEKLRTEEEAGE VA+  GDMAS+V IPKMLL SLKVKLGI+PDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIG+ TFDGQMKAPFTAHPKKDPDTGKLHAFGYQF D  KPYVTYYVLDK GKLERQFPIV +KRPIMMHDFAITKNYAVFLD PLLFKPEL+L G+VP AFDETAGSR  VL L A
Sbjct:   32 DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTLARNGPNPKFKPKAGYHWYDGDGMVHSVRIKDGKATYSNRYVRTEKLRTEEEAGEPVAMNFGDMASMVVIPKMLLSSLKVKLGIVPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGQTTFDGQMKAPFTAHPKKDPDTGKLHAFGYQFKDSNKPYVTYYVLDKDGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDLPLLFKPELILAGKVPIAFDETAGSRMGVLLLDA 311
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: D8LPR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR0_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 6.110e-115
Identity = 174/282 (61.70%), Postives = 216/282 (76.60%), Query Frame = 1 
Query:    1 DKDNLFLSKVYAPVDEETT-RACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIK-AGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQVPFAFDETAGSR-SVLSLTA 837
            DKDN FL+ V+APV EE T   CEVVG LPE + G   RNGPNP+F PK GYHWFDG GMVH VRIK +G A Y+NR++RT++L+ EEEAGEA+ V +GD++S + +PK+LL +LK KLG++PD  A  ET ANTSL+FHAGRL AL E G+PYALRVMCDGVIET+G+ +F+G+++ PFTAHPKKDP TGKL+ FGYQ      P++T YVLD  GK+ERQFP VDV R   MHDFAI++NY VFLD PL+FK E +L G+ P  +D+T G+R  VL L A
Sbjct:   21 DKDNKFLNGVFAPVHEENTAEECEVVGTLPEVVCGEFVRNGPNPRFMPKGGYHWFDGLGMVHGVRIKPSGAAFYTNRFIRTKRLQAEEEAGEALGVTMGDLSSKLSVPKLLLSTLKEKLGVLPDFRALRETNANTSLEFHAGRLMALQEAGVPYALRVMCDGVIETLGRTSFEGKLETPFTAHPKKDPATGKLYGFGYQMQG--NPFLTMYVLDADGKIERQFP-VDVGRATAMHDFAISENYCVFLDVPLVFKGENLLKGKFPLVYDDTLGARMGVLRLDA 299
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A0A2P6S7P6_ROSCH (Putative carotenoid oxygenase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S7P6_ROSCH)

HSP 1 Score: 255 bits (651), Expect = 1.570e-78
Identity = 134/270 (49.63%), Postives = 180/270 (66.67%), Query Frame = 1 
Query:   16 FLSKVYAPVDEET--TRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKP-ELMLTGQVPFAFDETAGSR 816
            +L+  +APV EET  T+   V+G LP+ LNG   R GPNPKF P AGYHWFDGDGM+H +RIK GKATY +RYV+T +L+ EE  G A  +K+GD+  L G+  + +  L+ KL I+ D+      T NT+L +H G+L AL EG  PY L+V+ DG ++T+G   +D ++K  FTAHPK DP TG++  FGY       PYVTY V+ K G +    PI  V  PIMMHDFAIT+NYA+F+D PL F+P E++  G++ F+FDET  +R
Sbjct:   19 YLAGNFAPVIEETPPTKDLNVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGMRIKDGKATYVSRYVKTSRLKQEEYFGGAKFMKIGDLKGLFGLLMVYMQQLRAKLKIL-DISYG-HGTGNTALIYHHGKLLALSEGDKPYVLKVLEDGDLQTVGLLDYDKRLKHSFTAHPKVDPFTGEMFTFGYLHDP---PYVTYRVISKDGFMHDPIPIT-VPAPIMMHDFAITENYAIFMDLPLYFRPKEMVKEGKLIFSFDETKKAR 282
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A0A5J4XKX1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKX1_9CHLO)

HSP 1 Score: 256 bits (653), Expect = 3.740e-78
Identity = 129/273 (47.25%), Postives = 182/273 (66.67%), Query Frame = 1 
Query:    4 KDNLFLSKVYAPVDEETT-RACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQ-VPFAFDETAGSR 816
            KDN+FL  VY PVDEE   +  +V+G +P +LNG   R GPNP FKP   YH FDGDGM+ + RIK G   +SN YV T +LR E+ AG  + +K+GD+  L G+ ++  + L++KLG+    D     TANT+L +HA +L  L EG LPYA+R +C+GVIET+G+  ++G++K PFTAHPK DP TG+L  FGY       P+VTY V D  G ++   PI  +   +MMHDFAIT+++A+FLD PL+FKP+ M+  + +PF +D++  +R
Sbjct:   58 KDNIFLKGVYKPVDEEVNVQGLKVIGQVPLSLNGVFCRVGPNPYFKPIGDYHIFDGDGMIFACRIKNGTVNFSNSYVDTNRLRQEKAAGHPLGLKIGDLRGLGGLLELAWHQLEIKLGVYDVKDGF--QTANTALIYHANKLLVLHEGDLPYAVRALCNGVIETMGRVNYEGKIKHPFTAHPKIDPQTGELFFFGYNVNK--HPHVTYKVADPEGHIQSSVPIT-IPHGVMMHDFAITQDHAIFLDCPLVFKPDEMVKKRTLPFVYDDSLPTR 325
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A9Z0V7_ROSDA (Carotenoid cleavage dioxygenase 1 n=6 Tax=Rosoideae TaxID=171638 RepID=A9Z0V7_ROSDA)

HSP 1 Score: 254 bits (648), Expect = 1.880e-77
Identity = 132/270 (48.89%), Postives = 179/270 (66.30%), Query Frame = 1 
Query:   16 FLSKVYAPVDEET--TRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKP-ELMLTGQVPFAFDETAGSR 816
            +L+  +APV EET  T+   V+G LP+ LNG   R GPNPKF P AGYHWFDGDGM+H +RIK GKATY +RYV+T +L+ EE  G A  +K+GD+  L G+  + +  L+ KL ++ DL      T NT+  +H G+L AL EG  PY L+V+ DG ++T+G   +D ++K  FTAHPK DP TG++  FGY       PYVTY V+ K G +    PI  V  P+MMHDFAIT+NYA+F+D PL F+P E++  G++ F+FDET  +R
Sbjct:   58 YLAGNFAPVIEETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGMRIKDGKATYVSRYVKTSRLKQEEYFGGAKFMKVGDLKGLFGLLMVYMQQLRAKLKVL-DLSYG-HGTGNTAFVYHHGKLLALSEGDKPYVLKVLEDGDLQTVGLLDYDKRLKHSFTAHPKVDPFTGEMFTFGYSHDP---PYVTYRVISKDGFMHDPIPIT-VPAPVMMHDFAITENYAIFMDLPLYFRPKEMVKEGKLIFSFDETKKAR 321
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BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: A0A059BIQ1_EUCGR (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059BIQ1_EUCGR)

HSP 1 Score: 250 bits (638), Expect = 2.500e-77
Identity = 134/271 (49.45%), Postives = 177/271 (65.31%), Query Frame = 1 
Query:   16 FLSKVYAPVDEETTRACE--VVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALET-TANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKP-ELMLTGQVPFAFDETAGSR 816
            +L+  +APV +ET    +  VVG LP+ LNG   R GPNPKF P AGYHWFDGDGMVH +RIK GKATY +RYVRT KL+ EE  G A  +K+GD+  L G+  + +  L+ KL I   LD +  T T NT+L +H G+L AL E   PY L+V+ DG ++T+G   +D ++   FTAHPK DP TG++  FGY  T    PY+TY V+ K G +    PI  +  PIMMHDFAIT+NYA+F+D PL F+P E++   ++ F FD+T  SR
Sbjct:   59 YLAGNFAPVADETPPVTDLPVVGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMVHGMRIKNGKATYVSRYVRTSKLKQEEYYGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKI---LDVSYGTGTGNTALVYHHGKLLALSEADKPYVLKVLEDGDLQTLGMLDYDKRLSHSFTAHPKVDPFTGEMFTFGYSHTP---PYITYRVISKDGFMHDPVPIT-ISDPIMMHDFAITENYAIFMDLPLYFRPKEMVKDNKLIFTFDKTKKSR 322
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Match: V4TG75_CITCL (Uncharacterized protein n=1 Tax=Citrus clementina TaxID=85681 RepID=V4TG75_CITCL)

HSP 1 Score: 249 bits (636), Expect = 2.850e-77
Identity = 131/271 (48.34%), Postives = 180/271 (66.42%), Query Frame = 1 
Query:   16 FLSKVYAPVDEET--TRACEVVGALPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLDAALET-TANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTDMTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKP-ELMLTGQVPFAFDETAGSR 816
            +LS  +APV +ET  T+   V+G LP+ LNG   R GPNPKF P AGYHWFDGDGM+H +RIK GKATY +R+VRT +L+ EE  G A  +K+GD+  L G+  + +  L+ KL +   LD +    TANT+L +H G+L AL E   PYA++V+ DG ++T+G   +D +++  FTAHPK DP TG++  FGY  T    PY+TY V+ K G +    PI  V  PIMMHDFAIT+NYA+F+D PL F+P E++   ++ F FD+T  +R
Sbjct:   95 YLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKV---LDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTP---PYITYRVISKDGFMHDPVPIT-VSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKAR 358
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6599.17441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGA2_ECTSI1.780e-18995.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG96_9PHAE1.320e-18484.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGA3_ECTSI1.530e-17990.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSQ0_9PHAE1.140e-17890.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPR0_ECTSI6.110e-11561.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P6S7P6_ROSCH1.570e-7849.63Putative carotenoid oxygenase n=1 Tax=Rosa chinens... [more]
A0A5J4XKX1_9CHLO3.740e-7847.25Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A9Z0V7_ROSDA1.880e-7748.89Carotenoid cleavage dioxygenase 1 n=6 Tax=Rosoidea... [more]
A0A059BIQ1_EUCGR2.500e-7749.45Uncharacterized protein n=1 Tax=Eucalyptus grandis... [more]
V4TG75_CITCL2.850e-7748.34Uncharacterized protein n=1 Tax=Citrus clementina ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6599contigEcto-sp13_S_contig6599:700..7839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score543.1
Seed ortholog evalue7.5e-152
Seed eggNOG ortholog2880.D8LGA2
Preferred nameCCD1
Model size837
KEGG koko:K00465,ko:K11159
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008300,GO:0009056,GO:0009506,GO:0009987,GO:0010436,GO:0012505,GO:0016020,GO:0016042,GO:0016108,GO:0016110,GO:0016115,GO:0016116,GO:0016118,GO:0016119,GO:0016121,GO:0016122,GO:0016124,GO:0016491,GO:0016701,GO:0016702,GO:0030054,GO:0031090,GO:0042214,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045549,GO:0046247,GO:0051213,GO:0055044,GO:0055114,GO:0071704,GO:0071944,GO:0098588,GO:0098805,GO:1901575
Exons6
EggNOG free text desc.oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
EggNOG OGsCOG3670@1,KOG1285@2759
Cds size837
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6599.17441.1prot_Ecto-sp13_S_contig6599.17441.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6599 700..7839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463909.0274315-CDS-Ecto-sp13_S_contig6599:699..8761681463909.0274315-CDS-Ecto-sp13_S_contig6599:699..876Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 700..876 -
1681463909.0388916-CDS-Ecto-sp13_S_contig6599:2187..22561681463909.0388916-CDS-Ecto-sp13_S_contig6599:2187..2256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 2188..2256 -
1681463909.0481677-CDS-Ecto-sp13_S_contig6599:3395..35681681463909.0481677-CDS-Ecto-sp13_S_contig6599:3395..3568Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 3396..3568 -
1681463909.0573575-CDS-Ecto-sp13_S_contig6599:4489..46231681463909.0573575-CDS-Ecto-sp13_S_contig6599:4489..4623Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 4490..4623 -
1681463909.0664787-CDS-Ecto-sp13_S_contig6599:5205..53121681463909.0664787-CDS-Ecto-sp13_S_contig6599:5205..5312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 5206..5312 -
1681463909.0756729-CDS-Ecto-sp13_S_contig6599:7662..78391681463909.0756729-CDS-Ecto-sp13_S_contig6599:7662..7839Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6599 7663..7839 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6599.17441.1

>prot_Ecto-sp13_S_contig6599.17441.1 ID=prot_Ecto-sp13_S_contig6599.17441.1|Name=mRNA_Ecto-sp13_S_contig6599.17441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp
DKDNLFLSKVYAPVDEETTRACEVVGALPEALNGTVARNGPNPKFKPKAG
YHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMA
SLVGIPKMLLYSLKVKLGIIPDLDAALETTANTSLDFHAGRLFALCEGGL
PYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFTD
MTKPYVTYYVLDKSGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLL
FKPELMLTGQVPFAFDETAGSRSVLSLTA
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mRNA from alignment at Ecto-sp13_S_contig6599:700..7839-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6599.17441.1 ID=mRNA_Ecto-sp13_S_contig6599.17441.1|Name=mRNA_Ecto-sp13_S_contig6599.17441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6599:700..7839- (Ectocarpus species13 EcNAP12_S_4_19m)
GACAAGGATAACCTCTTCTTATCCAAGGTCTACGCCCCGGTAGACGAAGA
GACGACCCGAGCGTGCGAGGTCGTGGGAGCACTTCCAGAGGCTCTCAACG
GGACTGTGGCTCGGAACGGGCCAAATCCCAAATTTAAACCAAAGGCCGGC
TATCACTGGTTCGACGGAGATGGAATGGTGAGCCGTAGCTTGAAGAGGAT
TGCCACGAACGACGAGAGGACTCAATGAGCAAAGTGTTGGTATCACTGCG
TTTGGGGTTCTACATTTGTTGACCTATGGCTGCGGAAAAATGACTCCTGG
TCCCGCTATGTGATACAGTTTGAGTAGTTGCGACTTCCCTTTGTACCACT
AGTGAGTTCTGCTAGCGCGACGTTCATCCAGTAACGTGCCGGTACTTCCA
CTTTTTTGTACGGGTGTTCCGTGGTATGCCGCCGGCATTGGGCTCTGCGG
ATTCGTGACCCTGTCCGATGTCTTATGCCACAGACACACGGTCGTGACGC
CATCTACCTCTGTGTGGGTGTACCTTATGATGGCAGTTGCTTTGAAGTTT
GAAGACGAGTTTGTCTGTGCTCTGTCGTGCCCGCCCACTCTCAGGCCAAC
ATCTTCTCAGACGTGTGGGCGACGCGTGTATTTCTCGTCTTCACTCCCGC
TCTCTCTTTCTCCTGAATATTGATTATTCCGTTTTTTCGATGGCCGCAAA
CTTGCAACGAAGGTGCTTTGATGTTGAGATACGGGATCTACTGTAGGCGG
GACCAGCACCGAATATGTGTACTTTTTTGGCTGCCTGCCGTGTTTGGTTC
TCTGCGACCTTTTGTACTGTCAAATGGAGGAACTGTGCTGCGTGGAGTTG
CATGGTCAGCACGACTGTATTGGTGTGAACAAATCAAGTACGCACACACC
GCAGCTGCACGCCACGCTCCTTTGTAAGCGCACGTCTCCGATGCTCAGTC
GGACAATGTTTCAGGAATTTCCCCGATACAAGAGAGACGCACTCTATGTT
GTGTTTTTAAAAATAAGCAAATATATGTTAGAACCAAGCATCGCAACGCG
TGAGGTGAACCAATCAATCATCGCAACGCGGGGGGGGGTCCGGGGGGGGG
GTTTACCCCCCCGGCACCCTTGGGTGGACCAAGCAAACCACGCGTGAGGT
GAACCAAGCATCGCAACGCGGGGGGGGCAGAGGAGACTCCATCTACAGCA
ACAGCAGTAGAATGTACAGCAGTATGTGTCTTGTACCTGGGTAGCACTGC
TGTATAGGTGTGCGTGCATACAATAGACTGACTGCGGTGACCTACACCTG
TCTGGCGAACAACGGGCTCCATCGCAAAGCACTTGAGGATGTTCTATCAA
GTGTGTTACTGCTGGTGCTGCTGGTGCACACCTTTGTACGCACTGCAGCT
GTGTGTGTGAACCTCTCGCTGTGTGTACCATGGCGGCACTGCTGTGATGG
TACATACAGGTATGCTCCATGCATATTGTATGCTGACGACGTATGTTGGC
TGGATACATCTTGTAGCTTGTAGCAGCAGCGGTCACACCGCACATGGGAC
GGAGCCCCCGCATACCCCTCAGAAAACAATTTTCAATCGCAGGGGGGGGG
GGGGAGGGGCAACACCTACGGACATATATGTCGCTTCTTTGTGACCTGGG
CTGCAGGAGGTGCGTCCCTGGGAACCAAAACGCCTATGCAACGACACATC
ATCAGCAGCAGCAGACAACCCAAGCTAGCAATACAGCAGCCATCATACAT
ACACAATACCCGCCAGCCTCCTGCCAGGCTGCTCTGCTGCAGGCTACCAC
TCACTGCTGTAACACAGACGGTTGCTACTGCCATGAGCTAGCACGGAACG
GATTGTTGTGATTCCACGATGGTGTACCCGTGTTTCGTTCTCTAGTGTTG
CTCATCGCTCTAATTTTAGTCAGCGAGCGCATGCCTACGGTTGTACCAGT
ATTACGTGGAACCGAGACTGTTTCTTTTCCTTCCATACTTCCCGGTTGCA
CACGGCTGTTTAATGAAAGTTCCAGTTTTTAGTTTTTTCTATGTTTGCCT
AGGGCCAAGGATACTGCACTACCATCAACGATTTCTCGAATGGTGCTGGC
ACCGAAAATATTGGAGATTTCTCAAAACCCTGAATAATGCCGGCTGGACA
ACAATCTGGACCACTCTATTCAATGCCGGGGTCTCGGTAAAGTGCTGGTC
AAACTGGCCTGGCACGACCGACGTTTTTGCGGGACGCTCGTGCGAACGGT
GAATCCCCTGCACCACGGAGCGAGCCCGCCCAATGATCAACTATTGCCTC
TTTCGCGTGCTCGGAGAGAGAGAATGAGTTGAAACCCTCAGCTGTTGGTT
CGAGGTAGCAGTTTCGACGTTCGGAAACATTGTCATGCTTGTCGTTACTG
ACTGTGTTCCCTCGGTGCTTATTCCACGGCCAGCAACAAAGGCCATAGTG
AAGGATCTGCCTGTACGCTCCCGTGACGGATATCAAGTACGAACTCAGCA
CACCCAAATAATACCACCAAACGCCAGGTGCATAGCGTCCGGATCAAGGC
GGGCAAGGCAACATACTCCAACCGGTACGTGAGGACGGAGAAGCTAAGGA
CCGAAGAAGAGGCGGGCGAGGCCGTGGCCGTCAAGTAAGAGGGGAGCAAA
TGAAATACGAGGATGCGGTCTTTGATGACGATTGGCAGAGCCCAAACATT
TTGTCGTACTTAAGTTCGGGCCATCCGTTTGAGACCCCTCCGATACTGGT
CCGCTGTTGTCAGTTGTTTGACATACATACTTCGTCGCAGCGTTGATTAG
AGTGCGGAAAGCACCACTACTTAAGAACTTCACAATTATTGCGAGAGTAC
GTGGCTCTCCTCTGTGGGTAACCGATGACGACTACATTGCCAATTGCCCG
AGCTCGAAGCCAAGCGAAATACTTGGAGGCCCCAGTTGTCCTGTTTGAAG
CTTTTTGTTAGACTTTGATGTTTTCATTTTTAGATCTTTTCGTGGTGGCG
AGTTCTTTAGTCGCAGCATGTATATGGAGCAAGGACTGCGCCCCTGGATG
AAATTCCTATCGGCAGTTTCGGCTGCTTGTTGTCGCGTGGTCTCCCATCC
CACGTAGCGACGCTACCCCTTTAGCACCAACACTTAGATCTTGTACGACG
AAGCATGCAAACGTACTTTGAGGCTGACGATATGTCGTGGCATGTCGCTG
TTTTATTTTTCTTCAGGTTAGGTGACATGGCATCTCTGGTGGGCATTCCG
AAGATGCTACTTTACTCCCTTAAAGTGAAGCTCGGGATAATCCCTGACTT
GGATGCCGCTCTGGAAACGACCGCAAACACCAGCCTCGACTTCCACGCAG
GTGCGCGTGTTGCTGATGGAGTTGCGGTTGTCACTGCTGCTCCTCCTGTT
GGTGTTGGTGTTGTGGTTGTTGGACTGCTGCTGTATTCGTAGGTTGTTTA
CGCCGGTCGGACCTCATAGACGGCATATTTACAAACCGGTTTTCGGATCC
TTCAACCGGTATGAGGCGGCTTCGGTGCCGAATCGACGGTTTCATGTGCG
ACACGAAACCCTCACCTCAAGCTCCGATGAACACTGGCTTGCCACAAACG
TGTGCCATGATGATCTCACACACCCCCACAACCGCGCCGGGGACCCCGAC
GTGATGGAGAGAAAGCTCGTGTTTCCGAGTCCACCTGAGAGTTGTTTTTT
CCCTTCGTCAGTGTGTAGTTTTGTCGAATTCGTGGATTGCAGGAATAGCA
AATTGCGCGGCGGTACGGCGACGTGCAATGACAGGACGGGGGAGAGCTGT
CCGGATTTGTTTTTGATCTTATCTCGATTGAACGTTACCAATGACTGAGT
TCCGTACTCGGTTAATGCCGAGCTCTCTGAAGGACGGGGGGTGGATACAA
CAACAGCCCGGGCGCGAAACTGACTTACGTTTTTTGCTTCGTTCCCACTA
TAAGAAGGTGGCGAGATAAAGGAACTGTCCTTTCTGCATATTGCCCGAAT
GAGCATACGGAAGACCGGCACATATGTGACCTTTTGAGAGCTTTCCTCTT
GTTGTCAATCTTTAGCCTCCCGTGCCCACCCCTCCCCTCGCATCTTACGA
CACAACGCTAGCTCGTTTGGCTAGCACATTCCTCACACTCTCGCTGACGC
CCACCATGTTTGTAACGCGCCGTATTATTTTATCTTCTCATACCGTGCTT
TCGGTACTCAGTAGGCTTTTGGCATCCTTCCACTTTACACCACGTTTGCA
ACCCGCATTTGTTTTTTTCAGGCCGTCTCTTTGCTCTCTGTGAGGGAGGT
CTTCCATACGCCCTCCGCGTCATGTGTGACGGGGTGATCGAGACGATCGG
CAAGGCTACTTTCGACGGCCAGATGAAGGCGCCGTTCACGGCTCACCCCA
AGAAAGACCCAGATACCGGCAAGCTGCACGCGTTCGGCTATCAGGTACCA
GGTTGTTGAATCGAAGAACGGCATCCTCAATGACGAAGACATTCGGCCCC
GCATGGTACCAAACATTCTGTCATCTCCTATTGTTCGCCTTACACGCAAG
GATTTCCGTCTCCATCTCGACATCGATAAGCGCGTACGATGACTTTGTCA
GGAGCCACCTCTACTATCCATGTTATGGTCGATGGAAAATGGTAGCCGGC
ACATTTACTTTCAGAGAGAGCTGACCTCCCGACCAGGTGCACCGCCAAAC
GGTACGCCTTCATTTAGTGATGTGCATGTAGCTAGCAATTTGTTGTTTTC
GGGTTGCATCCTTTATTGTGCCTTGGATGGCCGTGTCCGACCAAAATGTG
GGCTTGGTTGCGAATATGTGGGGTATTGACCTACGTTCTGATGCCCGCGA
TGGTATGGCGCTGGACACCATGTTCGTGATAGCCGTCGCTGTTGTGCATA
GGGAAATGCCACCCAACCGTGTAAGTCGACCAGCCCGTACAGTATATGTA
CAGACTACATATTTGTGGAAAACAAGCACCCTGAGGAGCCCGGGCAGTTT
GTTCGTGATGGGCATCCACTCGAGCCTCCTTCAAGCTGAGGGCTTCGTTC
TACGGCCACGATGATCGGTCGGGAGTATTGTTTTAGAGAAATAGTGTCAG
GACAGTGGGTGTTCTACACTGACCTCGGGTATGTCCTCGGTTAATGCAGC
TGTGCATGGCCTCGACAGGCCGAGCAGTGTCCTACATGATTCCTCCGTGC
TCAAAGATATGCACTCCAAATGGTACCGAGACTACCACCGTGACCTATCG
TGGGATATGTGAATCTCTGGCAGTTTATTTCTGATCGTGGCACCACCTGA
GCGACCAGATTGCGCAAAAATAGTTACGTGTAGTTTTGTGGAGGGATCGC
TTGTTCGAAGACCTATCGAGCGGTGTTTTTTGTCCTGGTCTCTTGCGATT
CTTCCGTCACCTAATGCAAGCTGGTTTGAAGCGAGTTTGGACAATCGTAC
TATTTTCCTCTGCATCGAAGCCGTCGACCCCATGGTTGATGCGAACACGA
GGTGTCTATTCGTAGACTAGTTGAAGAACCTCTGCTTGCATTGGTCTGTG
TGTTCATCGTGTCTATCTTTATCTCCACGCCAGTTCACGGACATGACCAA
GCCGTACGTGACCTACTACGTGCTGGACAAGAGCGGAAAACTGGAGCGTC
AGGTACGGCCTGAACGAAACTTAAAGTCAGCGAATGTAGTGTACAAGATT
CAGCCGCACGTGGGAATACGACGGAAAATATTTTCATCGGGTCTGAGTCG
TGTACTGCTTGCAGCGCCCACTGTCTTGCTTCGTTTCACTAACAATTGGC
AGGTGAACAAGTATAACTCTTTGGACGTCGAACTGAAGTACTTCCCTGGT
GCAATATTTGACTTCGTCATCAGCTTGCACGTTTTCGAACCCCAAGGTTC
TACACTTCATCACCTGCCACTTCGGTCGTTGAGAAAGAGTGTGTACGTCA
TGCGTGTATCGCTGGTGAACTTGATCAACAAGAACTTCTAATTGTACCTA
GAATGGAACGTTGAGGGTCTAAAACATCGCCTTGGCCAAGAAAAAAGAGA
TTTGTAGTCGAACAAAGACCCAGTGTCTTCCACATAATTGCAGCCTGTGT
CGTTGGGCAACGCTCCTTTGCCGGGGTTTCTGGCGCAGCCTTCAGTGGCT
ACACCTCAAGACAAACCTTTATGTCTACAAAGGCAAAACATACAATAGAA
GGTGGTCGCCGCCAACGCAGCAGAATGGGAGCGATTGGCTCGCATAACGT
GGCCTGGTGGCACGACGGCATTTGCTCCGATAAACAGACACTACCCGCAT
TCTTCCAAGGCGTCATGGACGGGAGTAGCCCTCCCATCTGACAAGACTAC
GGTGATGCCGGCTCGCATGCAAGCGCGCGACGCTATCAAGCAGTACTTTC
CGGGTCCGACAAAAGGTCAAAAAATCACTTCTTCGTCGCATCGCCATGCA
GGGGTCCGACAAGGAATGAAGTTGACGGGACAAATAACTACATAACTATT
CCGAGGACGGTGCCTACAGAAATGAAAACGATTCGTGATTGTTTCGTAAA
TATCTACCACGCAACACCAGAAAGAACCAAAAGAGTCAACAAACCTGTGC
TTTGGACTGCGTTCAGGGTCACACAAGGTTGCCACAAATGAGTGAAATAT
GATCGATCGGCTTGGCTTCACTATAGTTGCCTGACGGAGTACGAGCAATG
GCGGGGCCGGGTGATGGAAGTTATGAACAAATACTTACTGTGGAGTTGAG
TCCTCAACAGCAATGGTCCGTATAGTCGTCAGTGGTCGTCATTTTCAGGC
CGTTGAATCAGCCATTTCCCGTCATGACTCCCATTGTCGCGGACGACTCC
GCTGTAACAACTCTTCGCCAGCTTCGATCACCCAACATTTTGACTCGTGT
TTGTTTGTCTGTTCGATTTTTCGTGCGATGTGACCTCGTCCCTCCGGAAC
CGGACGCCTCAAGTTTCCAATCGTGGACGTCAAGAGGCCGATCATGATGC
ATGACTTTGCAATCACCAAGAACTACGCAGTTTTCTTGGACTTTCCCCTG
CTCTTCAAGCCGGAGCTGATGTTGACTGGGCAAGTCCCCTTCGCTTTCGA
CGAGACGGCGGGGTCCAGGTCAGTCTTGTCTTTAACCGCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6599:700..7839-

>mRNA_Ecto-sp13_S_contig6599.17441.1 ID=mRNA_Ecto-sp13_S_contig6599.17441.1|Name=mRNA_Ecto-sp13_S_contig6599.17441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6599:700..7839- (Ectocarpus species13 EcNAP12_S_4_19m)
GACAAGGATAACCTCTTCTTATCCAAGGTCTACGCCCCGGTAGACGAAGA
GACGACCCGAGCGTGCGAGGTCGTGGGAGCACTTCCAGAGGCTCTCAACG
GGACTGTGGCTCGGAACGGGCCAAATCCCAAATTTAAACCAAAGGCCGGC
TATCACTGGTTCGACGGAGATGGAATGGTGCATAGCGTCCGGATCAAGGC
GGGCAAGGCAACATACTCCAACCGGTACGTGAGGACGGAGAAGCTAAGGA
CCGAAGAAGAGGCGGGCGAGGCCGTGGCCGTCAAGTTAGGTGACATGGCA
TCTCTGGTGGGCATTCCGAAGATGCTACTTTACTCCCTTAAAGTGAAGCT
CGGGATAATCCCTGACTTGGATGCCGCTCTGGAAACGACCGCAAACACCA
GCCTCGACTTCCACGCAGGCCGTCTCTTTGCTCTCTGTGAGGGAGGTCTT
CCATACGCCCTCCGCGTCATGTGTGACGGGGTGATCGAGACGATCGGCAA
GGCTACTTTCGACGGCCAGATGAAGGCGCCGTTCACGGCTCACCCCAAGA
AAGACCCAGATACCGGCAAGCTGCACGCGTTCGGCTATCAGTTCACGGAC
ATGACCAAGCCGTACGTGACCTACTACGTGCTGGACAAGAGCGGAAAACT
GGAGCGTCAGTTTCCAATCGTGGACGTCAAGAGGCCGATCATGATGCATG
ACTTTGCAATCACCAAGAACTACGCAGTTTTCTTGGACTTTCCCCTGCTC
TTCAAGCCGGAGCTGATGTTGACTGGGCAAGTCCCCTTCGCTTTCGACGA
GACGGCGGGGTCCAGGTCAGTCTTGTCTTTAACCGCA
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