prot_Ecto-sp13_S_contig12040.1743.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12040.1743.1
Unique Nameprot_Ecto-sp13_S_contig12040.1743.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length566
Homology
BLAST of mRNA_Ecto-sp13_S_contig12040.1743.1 vs. uniprot
Match: D7FJS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS0_ECTSI)

HSP 1 Score: 591 bits (1523), Expect = 2.090e-186
Identity = 433/567 (76.37%), Postives = 444/567 (78.31%), Query Frame = 0
Query:    1 ANALEEARAASSLTRTSTNGKGTSGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSSRGRXTXFSGXPPAWAPQHQQGGDSPSAEQLKARADESXXXXXXXXXXXXXXXXXTDKKVAAGSEGSSRRRXXXXXXXXXXXXXXAAPGGSSTSRSRGQEEDERPVPEPEQATPAMPDWLTAATGEGSALKDTRGDGEDTIDTDDGGGGLDWLAQAASGGTPSKSQDRTSSQDADGTELYDEARTERAAAGESSRNTDAACNDVSSEHSGGGEGLDWLSAAAVVRRPQMKSRTHGLQSTATSTNVVAPKSRAQXXXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVSDRTNNGGDTGKEDTATQTDDVVIVETNKTVSEQTTSKNSTKSKLPPWAKXXXXXAAPA-VADPDSTSPSSADNRQAPSSGEDKATYXXXXXXXXXXXGLDWISAAVNNGTASLSHGPSASTTDTGGVPARATSGSSDQEKGEEGGSLSWLAKAAAGSSDRPADTARKSTTSIVATHGTATTDDYWLATAASGAARAYPSPSRRPSTDTKA 566
            ANALEEARAASSLTRTSTNGKGT GAAATDVRRPSLEQGLPPWAPK  TTALASSSSSRGRX X   X      QHQQGG SPSAEQLKARADES XXXXXXXXXXXXXXXX DKKVAAGS+GSSRRRXXXXXXXXXXXXXXAAPGGS TSRSRGQEEDE PVPE EQATPA+PDWLTAA G GSA KDTRGDGE TIDTDD GGGL WL Q     T SKSQDR  SQ+A  T L DEARTER AAG    +TDAACNDVSSEHSGGGEGL WLSAA VVRRPQMKSRTH LQ TATSTNVVA KSRAQ  XXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLV D TNNGGDTGKEDTATQTDDVVIVE  K+VSEQTTSKN TK KLPP   XXXXX     VADPDS+SPSS DNRQAP+ GEDKA             GLDWISAAV+NGT++LSHG SASTTDTGGVPARATS SSDQEKGEE                                       D WLATAASGAAR YPSPSRRPS +TKA
Sbjct: 1804 ANALEEARAASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKLATTALASSSSSRGRXXXXXXXXXXXXXQHQQGGGSPSAEQLKARADESPXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPESEQATPALPDWLTAAAGGGSAPKDTRGDGESTIDTDDDGGGLGWLTQXXXXXTTSKSQDRKGSQEAADTALDDEARTERTAAG----STDAACNDVSSEHSGGGEGLGWLSAA-VVRRPQMKSRTHELQPTATSTNVVASKSRAQQRXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVGDGTNNGGDTGKEDTATQTDDVVIVEAKKSVSEQTTSKNPTKPKLPPXXXXXXXXXXXXXVADPDSSSPSSVDNRQAPNVGEDKA-INAGGASSGGGGGLDWISAAVDNGTSNLSHGLSASTTDTGGVPARATSDSSDQEKGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDWLATAASGAARPYPSPSRRPSAETKA 2364          
BLAST of mRNA_Ecto-sp13_S_contig12040.1743.1 vs. uniprot
Match: A0A6H5KJD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD7_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 8.880e-161
Identity = 333/451 (73.84%), Postives = 344/451 (76.27%), Query Frame = 0
Query:   15 RTSTNGKGTSGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSSRGRXTXFSGXPPAWAPQHQQGGDSPSAEQLKARADESXXXXXXXXXXXXXXXXXTDKKVAAGSEGSSRRRXXXXXXXXXXXXXXAAPGGSSTSRSRGQEEDERPVPEPEQATPAMPDWLTAATGEGSALKDTRGDGEDTIDTDDGGGGLDWLAQAASGGTPSKSQDRTSSQDADGTELYDEARTERAAAGESSRNTDAACNDVSSEHSGGGEGLDWLSAAAVVRRPQMKSRTHGLQSTATSTNVVAPKSRAQXXXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVSDRTNNGGDTGKEDTATQTDDVVIVETNKTVSEQTTSKNSTKSKLPPWAKXXXXXAAPAVADPDSTSPSSADNRQAPSSGEDKATYXXXXXXXXXXXGLDWISAAVNNG 465
            RTSTNGKGT GAAATDVRRPSLEQGLPPWAPKSTTTALASSSSSRGR T FSG PPAWAPQHQQGGDSP AEQLKARADESXXXXXXXXXXXXXXXXX DKKVAAGS+GSSRRRXXXXXXXXXXXXXXA PGGS T RSR QEEDE PVPEPEQATPA+PDWLTAA G GSA K+                                         ADGT L DEARTE  AA ESS NTDAACN+VSS HSGG EGLDWLSAAAVVRRPQMKSRT      A STN+VA +SRAQ                  TAPG WLALS+ASGNLGGLSDDGESHL  DRTNNGGDTGKEDTATQTDDVVIVE + TVSEQTTSKNSTKSKLPPWAK     +APAVA PDSTSPSS DNRQAP+ GEDKAT     XXXXXXXGLDWISAAV+NG
Sbjct:    5 RTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSSRGRRTSFSGGPPAWAPQHQQGGDSPLAEQLKARADESXXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAGPGGSPT-RSRRQEEDELPVPEPEQATPALPDWLTAAAGGGSAQKE-----------------------------------------ADGTALDDEARTEWTAACESSGNTDAACNNVSSGHSGGSEGLDWLSAAAVVRRPQMKSRT------AISTNLVASESRAQQRNSASSVPSSLSKITSSTAPGSWLALSIASGNLGGLSDDGESHLAGDRTNNGGDTGKEDTATQTDDVVIVEASTTVSEQTTSKNSTKSKLPPWAKPWSKPSAPAVAGPDSTSPSSIDNRQAPNVGEDKAT-DAGGXXXXXXXGLDWISAAVDNG 406          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12040.1743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJS0_ECTSI2.090e-18676.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD7_9PHAE8.880e-16173.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12040contigEcto-sp13_S_contig12040:480..5175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12040.1743.1mRNA_Ecto-sp13_S_contig12040.1743.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12040 478..5175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12040.1743.1 ID=prot_Ecto-sp13_S_contig12040.1743.1|Name=mRNA_Ecto-sp13_S_contig12040.1743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=566bp
ANALEEARAASSLTRTSTNGKGTSGAAATDVRRPSLEQGLPPWAPKSTTT
ALASSSSSRGRRTSFSGGPPAWAPQHQQGGDSPSAEQLKARADESPEGRR
PGLAGGMPSWAPTDKKVAAGSEGSSRRRRRSSLDRGMPAWAPAAPGGSST
SRSRGQEEDERPVPEPEQATPAMPDWLTAATGEGSALKDTRGDGEDTIDT
DDGGGGLDWLAQAASGGTPSKSQDRTSSQDADGTELYDEARTERAAAGES
SRNTDAACNDVSSEHSGGGEGLDWLSAAAVVRRPQMKSRTHGLQSTATST
NVVAPKSRAQQQSSASAGPSSSSKTTSSTAPGGWLALSVASGNLGGLSDD
GESHLVSDRTNNGGDTGKEDTATQTDDVVIVETNKTVSEQTTSKNSTKSK
LPPWAKPWSKPAAPAVADPDSTSPSSADNRQAPSSGEDKATYYAGGSSSG
GGGGLDWISAAVNNGTASLSHGPSASTTDTGGVPARATSGSSDQEKGEEG
GSLSWLAKAAAGSSDRPADTARKSTTSIVATHGTATTDDYWLATAASGAA
RAYPSPSRRPSTDTKA
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