prot_Ecto-sp13_S_contig6590.17427.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6590.17427.1
Unique Nameprot_Ecto-sp13_S_contig6590.17427.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length999
Homology
BLAST of mRNA_Ecto-sp13_S_contig6590.17427.1 vs. uniprot
Match: A0A6H5JPD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD5_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 5.100e-194
Identity = 784/1098 (71.40%), Postives = 799/1098 (72.77%), Query Frame = 0
Query:   42 MPRPPLKGVETDEKQQPPDQDTPV------------SGAAPDRDGXXXXXXXXXX-KSPPKTKTGPSKLSIKRSNSFSIFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXK------------PKPKLHRKLSRPVFASSLPTSPTSSSSPTAASKGVVGFGWGKRSLRRGSSKDQRSKDKGPRGGE--TAGGGEEQEQED----PMTFTKSMAHAMAFAPDHDDIDSEVNRRSHRGRGGRRRDDRNTPPPREAGLIDFDDQSIGTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDGARSDVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RADSFLSEDDGSTCFEAVDANGS----SGHGLEQRNIGEEAVSPGLSDATEARTAAAIEALAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP------------STPXXXXXXXXXXX--------------------------------------------------------------------------------------------GEQGGQEPSPRLTFAEMRSKYQEAASRAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSLSSPGGVSAGSDTTAADNKKLYEAFLAPNRSRSSSPREAFSDGAPPTAXXXXXXXXXVPQGGGDGAPGVADDRPGVTIPGTASQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPAEPSNVSIHEVLWERIRLLEQQVEQHKEAERHREAAAGGQAVQAAELERENATLNEKLLAAESQLGAKTEAAKAAEALLNRRILELRKSQKENMTAAGEEFASLTRR 999
            MPRPP KGVETDEKQQP DQDT V            +GAAPDR GXXXXXXXXX  KSPPKTKTGPSKLSI RS+S SI T+ XXXXXXXXXXXXXXXXXXXXXXXXXX             PKPKLHRKLSRPVFASSLPTSPTSSSSPTAASKGVVGFGWGKRSLRR SSK QRSKDKGP GG   T  GGE+QEQED    PMTFTKSMAHAMAFAPDHDD+DSEVNRRS+RG+GGRRRDDRNTPPPREAGLIDFDDQS+GTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDG RSDVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RADSFLSEDDG T FEAV ANGS    SGH LE+R+IG+EAVSPGLSDATE RTAAAIE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              TP                                                                                                       GEQGGQE SPRLTFAEMR KYQE        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   DNKKLYEAFLAPNRSRSSSPR AFSDGAP TA  XXXXXXXVPQ GGDGAPGVAD  PGVTIPGTASQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         D+GASVG                 XXXXXXXXXXXXXXXXXXXXX                       XXXXXXXXXXXXXXXXX XXXXXXX                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EDPAEP+NVSIHEVLWERIRLLEQQVEQH EAERHREAAAGGQAV+AAELERENA LNEKLLAAE+QL AK EAAKAAEALLN RILELRKSQKENMTAAGEEFASLTRR
Sbjct:    1 MPRPPRKGVETDEKQQPTDQDTRVXXXXXXXXXXXXNGAAPDRGGXXXXXXXXXKDKSPPKTKTGPSKLSIARSDSLSISTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKPKLHRKLSRPVFASSLPTSPTSSSSPTAASKGVVGFGWGKRSLRRASSKVQRSKDKGPHGGRGGTVRGGEKQEQEDEEEHPMTFTKSMAHAMAFAPDHDDVDSEVNRRSYRGKGGRRRDDRNTPPPREAGLIDFDDQSVGTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDGTRSDVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADSFLSEDDGPTYFEAVVANGSTGLESGHDLERRSIGKEAVSPGLSDATETRTAAAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTPPEAVGPADGPSPLSNPGDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGRGEQGGQERSPRLTFAEMRRKYQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNKKLYEAFLAPNRSRSSSPR-AFSDGAPSTAAQXXXXXXXVPQDGGDGAPGVADHTPGVTIPGTASQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAVVGGESDKGASVGGDARPRLPEPTAAGSPKXXXXXXXXXXXXXXXXXXXXXLATGEPSQQHRSRDQERGMKDEAXXXXXXXXXXXXXXXXXRXXXXXXXSLSPAADVLHQGLVTTPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGG----EDPAEPANVSIHEVLWERIRLLEQQVEQHNEAERHREAAAGGQAVKAAELERENAALNEKLLAAENQLRAKAEAAKAAEALLNTRILELRKSQKENMTAAGEEFASLTRR 1093          
BLAST of mRNA_Ecto-sp13_S_contig6590.17427.1 vs. uniprot
Match: D8LM55_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM55_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 1.390e-142
Identity = 607/784 (77.42%), Postives = 620/784 (79.08%), Query Frame = 0
Query:  226 MAFAPDHDDIDSEVNRRSHRGRGGRRRDDRNTPPPREAGLIDFDDQSIGTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDGARSDVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADSFLSEDDGSTCFEAVDANGS----SGHGLEQRNIGEEAVSPGLSDATEARTAAAIEALAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTPXXXXXXXXXXXGEQGGQEPSPRLTFAEMRSKYQEAASRAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSLSSPGGVSAG-SDTTAADNKKLYEAFLA-PNRSRSSSPREAFSDGAPPTAXXXXXXXXXVPQGGG---DGAPGVADDR-PGVTIPGTASQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPAEPSNVSIHEVLWERIRLLEQQVEQHKEAERHREAAAGGQAVQAAELERENATLNEKLLAAESQLGAKTEAAKAAEALLNRRILELRKSQKENMTAAGEEFASLTRR 999
            MAFAPD DD+DSEVNRRSHRG+GGRRRDDR+TPPPREAGLIDFDDQS+GTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDG RS+VMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADSFLSEDDG TCFEAV ANGS    SGHGLE+RNIG EAVSPGLSDATEART AA+EALAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  STP           GEQGGQE  PRLTFAEMR KYQEAASRAGSA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              SDT AADNK L EAFLA PNRSRSSSPR AFSDGAP TAXXXXXXXXX         DG+PG AD   PGVTIPG+                                                 DE   V                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPAEP+NVSIHEVLWERIRLLEQQVEQ+KEAERHREAAAGGQA +AAELERENA LNEKLLAAE+QL AKTEAAKA EALLNRRILELRKSQKENMTAAGEEFASLTRR
Sbjct:    1 MAFAPDPDDVDSEVNRRSHRGKGGRRRDDRSTPPPREAGLIDFDDQSVGTTGDGDGGDSCYSYVSCNSVVSSSRYSIVYSSDGTRSEVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADSFLSEDDGPTCFEAVVANGSTGLESGHGLERRNIGVEAVSPGLSDATEARTVAAVEALAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSTPRQHQQQR----GEQGGQE--PRLTFAEMRRKYQEAASRAGSASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTAAADNKNLDEAFLAAPNRSRSSSPRAAFSDGAPSTAXXXXXXXXXXXXXXXXXXDGSPGAADHHTPGVTIPGSTLATGEPSQQHRSG-----------------------------------DEERGV--------------------------------------------KEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPAEPANVSIHEVLWERIRLLEQQVEQNKEAERHREAAAGGQAAKAAELERENAALNEKLLAAENQLEAKTEAAKAGEALLNRRILELRKSQKENMTAAGEEFASLTRR 699          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6590.17427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPD5_9PHAE5.100e-19471.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM55_ECTSI1.390e-14277.42Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 441..478
NoneNo IPR availableCOILSCoilCoilcoord: 936..956

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6590contigEcto-sp13_S_contig6590:212..7895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6590.17427.1mRNA_Ecto-sp13_S_contig6590.17427.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6590 212..7895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6590.17427.1 ID=prot_Ecto-sp13_S_contig6590.17427.1|Name=mRNA_Ecto-sp13_S_contig6590.17427.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=999bp
NPKQQASSSSSAGAADAAAAAAAAGGGRGVSKPGAHPRAYSMPRPPLKGV
ETDEKQQPPDQDTPVSGAAPDRDGGGGGSSRKKDKSPPKTKTGPSKLSIK
RSNSFSIFTTGGGGGGGGTSGTPPAAAPADGSSNNNNKPKPKLHRKLSRP
VFASSLPTSPTSSSSPTAASKGVVGFGWGKRSLRRGSSKDQRSKDKGPRG
GETAGGGEEQEQEDPMTFTKSMAHAMAFAPDHDDIDSEVNRRSHRGRGGR
RRDDRNTPPPREAGLIDFDDQSIGTTGDGDGGDSCYSYVSCNSVVSSSRY
SIVYSSDGARSDVMVEEMAVGGKRLMLEGHGITSLEAEEHMYGVNAASAA
AAAAAAAVAREESAAGGGSSAGGGSSSRADSFLSEDDGSTCFEAVDANGS
SGHGLEQRNIGEEAVSPGLSDATEARTAAAIEALAMAAASRAAAVAKAEA
AREAVARAEAAEAAHAEAQAAAQAAAAALGASAAAAADPSTPRQQQQEQQ
QQRGEQGGQEPSPRLTFAEMRSKYQEAASRAGSASSSSRSAAGRGRGRGS
GGRGAAAAGGAGWGGKSSSASAGSSLSSPGGVSAGSDTTAADNKKLYEAF
LAPNRSRSSSPREAFSDGAPPTAAQQQEPQQQVPQGGGDGAPGVADDRPG
VTIPGTASQAAAAAAAIAAASEAGSPGEAPATAAAAAAAAAAAAAAGEAA
AAGEGDEGASVGGDPPPRLPEATAAGSSLKKSSSSSSSPSPSSSSSASSS
SNAGGSTLATGEPSQQHRSRDEERGMQEEAEEERSRNEPLPPASSSSSSS
FSPAADMLHQGLVTTPAGDGGGGGHDKGKEEEEEGGQGAAVATATAAAVA
VAAAVVDDRGGGGVSGGGGGAGELEERQKQQQQQPQGGGEDPAEPSNVSI
HEVLWERIRLLEQQVEQHKEAERHREAAAGGQAVQAAELERENATLNEKL
LAAESQLGAKTEAAKAAEALLNRRILELRKSQKENMTAAGEEFASLTRR
back to top