mRNA_Ecto-sp13_S_contig6587.17422.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: D8LAW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW0_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 8.040e-174 Identity = 254/273 (93.04%), Postives = 261/273 (95.60%), Query Frame = 1
Query: 769 MITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTDDKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRFIYWNQEDSIVNPAGKERTVDDKAADRGKGVPAVVPAIVENCEQFALSEGVDLFKAKCDLTNAR 1587
MITPLEISRERLEPA+LRKYHPSSARWIMIQRFLDVKGPEYERVL+VD GQIFFQANPFDIIGDPGVYTFTDDKLIG SQQHSTKIQDCLGASVLA+LADKPAIHSGVSLGTS+LVV+YARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGP+TDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRR+IYWNQEDSIVNPAGKER VDDKAA VVPA VENCEQFALSEGVDLFKAKCDLTNAR
Sbjct: 1 MITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAA--------VVPATVENCEQFALSEGVDLFKAKCDLTNAR 265
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A7S2RBK6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK6_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.900e-59 Identity = 126/379 (33.25%), Postives = 192/379 (50.66%), Query Frame = 1
Query: 619 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTF--TDDKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRFIYWNQEDSIVNPAGKERTVDDKAADRGKGVPAVVPAIVENCEQFALSEGVDLFKAKCDLTNARVGSLGDCCAACGGRAGCQAFSFDESFGLCYMKNCDRPNTPGPSATAQSITSGIR 1749
DL +G+ GISP L F S R +PSA L ++ ++P E I++ + +T LE S +EPA LRKYHPS+ RW +I R+L Y RV++ DV FQA+PF+ D G + F + + IG + +QDC G +VL ++ + I SGVS+G++ V+ Y +M + + F CE+ GVD G+H+ L+++ + + F QS+G V ++ A + + G +V N + V +V++Y L + F F++W R D E C + + EGVDLFK +CDLT G+CCA C GC+AFS S C++KNC+ T P + SG +
Sbjct: 32 DLVVGLGTGISPENLAVFCGSLRAVSPSAALVLYLDSPLPELHRRIVERYDVTALEFSVSLIEPAFLRKYHPSNYRWPLIHRYLKDHANAYRRVVLADVRDTMFQADPFERF-DRGFFAFHGVESRTIGQCGWNGGWVQDCFGRTVLQQVQSEAIICSGVSMGSTDEVLAYLGEMQRTMETKEFATCERNGVDQGVHNVLVHTKRIPNLKVFSQSNGWVANLQAQRARIHGGQVFNRQDELVAVVHQYDRRRDLQSAYFDTFVFW------------PRKTDG-----------------ELCAGYTVEEGVDLFKGRCDLTVTGSQGTGECCAKCTATPGCKAFSIAGS--QCFLKNCNTVTTRSPMP---GVASGFK 375
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: L1IE52_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IE52_GUITC) HSP 1 Score: 140 bits (353), Expect = 8.520e-35 Identity = 75/212 (35.38%), Postives = 123/212 (58.02%), Query Frame = 1
Query: 772 ITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTDDKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDVPAGKFDMSGSR--VTNLEGREVPIVYRYVENAILTAEVFRRFI 1401
+T L ++R L+PA+L KYHPS+ RW+++Q FL G + +VL+ DV FQ++PF I+ + G++TF++ I ++ I+ C G + LA K I SG+SLGT+ V Y M++ ++ F ACE+ GVD G+H+ L++ G + G+ DQ +GPV + + K MS + V N IV++Y + + + FR+F+
Sbjct: 1 VTVLPVNRVSLDPATLGKYHPSTTRWVLMQSFLKRVGHNFNKVLLADVRDTGFQSDPFSIVSEAGLWTFSESVNIMGDDWNTGWIRSCFGQGKVDELASKEIICSGISLGTTMHVQSYLDAMAKEINGPNFAACERNGVDQGIHNVLVHQGSLPGLHVLDQYNGPVAHLQS-KVGMSFNNDVVINSRNERAVIVHQYDRDVFVMRKFFRQFV 211
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A7S4P7D4_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7D4_GUITH) HSP 1 Score: 142 bits (359), Expect = 2.370e-33 Identity = 105/385 (27.27%), Postives = 177/385 (45.97%), Query Frame = 1
Query: 610 GAGDLCLGMAVGISPAQLVTFAASFREFAPSADLFMF---FEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPG----VYTFTDDKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRFI--YWNQEDSIVNPAGKERTVDDKAADRGKGVPAVVPAIVENCEQFALSEGVDLFKAKCDLTN-ARVGSLGDCCAACGGRAGCQAFSFDES-FGLCYMKNCDRPNT---PGPSAT 1722
G+ D+ +G+A I QL F S R ++ D+ +F E + + F+I + S +E RK+HPS+ RW +I +F + +Y+RVLM DV FQ +PF+I+ D +T D+ IG + ++DC G + +RL+ KP I SG+S+GT V Y + MSE + F ACE+ GVD G+H+ L+++ + + Q G V ++ A +V N+ +V++Y + L + ++ W++E +G+GV CE + + + +LFK D+ + DCC C A C++F+ G C+ K+ +P++ P P T
Sbjct: 89 GSTDIAIGIAHKIHAVQLAVFVKSLRAYS-KCDIVLFVDELEKEVEKIGREAGVNFII--FKTSESMVERT--RKFHPSTIRWPLIHQFFSLHPDKYKRVLMADVRDTAFQGDPFEILKDSSSSFLAFTGVQDRTIGQCGWNGGWVRDCFGPEMFSRLSSKPIICSGISMGTMDAVKSYLQAMSEHIMKQEFAACERNGVDQGVHNVLVHTDKIPHLRVNRQDDGLVANMQAHVMKFRSGKVYNVNNELARVVHQYDRDLELQRSLLDSYVDFEWHKES------------------KGEGV----------CEGYTIRDNYELFKGLGDIKEEGNYPTFQDCCRQCNKLANCKSFTHKAGGTGTCFFKSASQPSSDPIPAPFLT 440
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: L1IEM2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IEM2_GUITC) HSP 1 Score: 144 bits (362), Expect = 3.470e-33 Identity = 103/387 (26.61%), Postives = 178/387 (45.99%), Query Frame = 1
Query: 619 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTDDKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAG-FQACEKAGVDAGLHDYLLYS-GGVQGVLRFDQSSGPVTDVP---AGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRFIYWNQEDSIVNPAGKERTVDDKAADRGKGVPAVVPAIVENCEQFALSEGVDLFKAKCDLTNA---RVGSLGDCCAACGGRAGCQAFS-FDESFGLCYMKNCDRPNTPGPSATAQSITSGIRL 1752
DL LG+ + F S R F+PS+D+ +F A T R + ++ + ++ + E + A++R + + RW++ +RFLD+ G Y RVL+ DV Q+ FQ+NPFD++ PG+Y F++ + + S I+ C +SVL L DK ++ G +G+ V+ Y + M+ + S C GVD G+H+ + Y+ ++ +Q++G V ++ A ++ V N G +V RY + +F ++ W+ + +G G C ++ L V+LFK D ++ RV S CC C C F+ FD++ C+MK+ R P TSG ++
Sbjct: 179 DLALGLVDKLHEEYTSIFVLSLRRFSPSSDIVLFLRASTP-RLDALLKNHGVISVKYAEEDISQAAMRNHSSLTYRWLVFERFLDLHGKNYRRVLLADVVQVAFQSNPFDVMKKPGLYAFSESISLSQDEWTSNWIRACFESSVLTPLPDKETLNVGYVMGSIDRVLPYVKVMAATIRSVTRADGCRGEGVDQGVHNVVAYTDASFSDLVVQNQNNGAVGELQSPFAMTYNAGVKAVINGMGVAAAVVLRYYHVPEVMKLLFNSYVVWDVHN----------------VSKGTG----------GCWRYMLMTHVELFKGHGDFADSSVERVASPLGCCEICDRNQQCNGFTHFDQT---CWMKSISRSPKPEEGFPVPESTSGWKI 535
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A7S3HHB0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHB0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.720e-14 Identity = 69/247 (27.94%), Postives = 106/247 (42.91%), Query Frame = 1
Query: 1024 IQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLS-----SAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDVPAGK----FDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRFIYWNQEDSIVNPAGKERTVDDKAADRGKGVPAVVPAIVENCEQFALSEGVDLFKAKCDLTNARVGSLGDCCAACGGRAG----------------CQAFSFDESFGLCYMKNC 1689
I+DC G V + P I SGVS+GT V DY +MS VL S+ F ACE+ GVD G+H+ L+++G + V + PV ++ A S +T+ G + +V++Y + L + +++ W KE T C F +S DLF+ KC+L + RV S CC C + C +F++ E G+CY+K+C
Sbjct: 30 IKDCFGEKVFESVKANPIICSGVSMGTIDGVKDYVAKMSSVLLGQDSLSSSFPACERNGVDQGVHNVLVHTGALSNVTVRYEYDFPVVNLQAYPQLQVTPADPSVLTSEAGVKYALVHQYDRLSPLQTALAGQYVDWVNLQDPQAEWEKEPT----------------------CAMFTVSYEKDLFRGKCELGSHRVMSAASCCQVCQSKKKPLSGSVNTGDYPPETVCSSFTYLE--GVCYLKSC 252
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A7W1CQ63_9BACT (Uncharacterized protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1CQ63_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 3.430e-11 Identity = 54/197 (27.41%), Postives = 92/197 (46.70%), Query Frame = 1
Query: 787 ISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTDDKL--IGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTD---VPAGK--FDMSGSRVTNLEGREVPIVYRY 1356
+ R E + + +H R ++ FL +Y+RVL+ D +FFQA+PF PG++ F +D+ +GT H I G L + D+ +G G ++DY QM + + +++ D G+H+YL+Y+G V D PV VP K FD + + + +G VP++++Y
Sbjct: 96 LPRASKELLAHKVFHLFYRRHLLYLAFLREYAADYDRVLLTDCRDVFFQADPFGWEQSPGLHLFLEDESNKLGTCGHHIRWIMSAFGPETLQKWKDETVSCAGTVFGDVQAILDYLEQMFS--QTMRVKTLKESDGDQGIHNYLIYAGAFPEVTIHDNRRKPVMTLGLVPPDKLQFDQN-DYLLDEDGAIVPVLHQY 289
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A2P6C0G0_9BACT (Uncharacterized protein n=2 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6C0G0_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 8.680e-10 Identity = 57/185 (30.81%), Postives = 88/185 (47.57%), Query Frame = 1
Query: 826 YHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTD--DKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSE--VLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDV---PAGKFDMSG-SRVTNLEGREVPIVYRY 1356
+H SAR+I +L + P Y+ VL+ DV + FQ NPF D ++ F + L+G ++ I + GA L LA P I GV+LG++S +V+Y R M V +G+ G D G+H+YL+ +Q V +G V P +RV +G PI+++Y
Sbjct: 144 WHCQSARFIYFFSYLK-RHPGYDTVLLTDVRDVVFQDNPFSASVDDALHVFEEYGGTLLGNQINNAKWIDNLYGADALEELAAFPIICCGVTLGSTSAMVEYLRLMCHDIVTRYSGW------GTDQGIHNYLVRKERLQNVTVHPFGNGAAMHVGIAPRSAIATDAEARVLTEDGTVCPIIHQY 321
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A8J3GDY8_9BACT (Uncharacterized protein n=1 Tax=Cerasicoccus arenae TaxID=424488 RepID=A0A8J3GDY8_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 5.220e-9 Identity = 47/187 (25.13%), Postives = 91/187 (48.66%), Query Frame = 1
Query: 835 SSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTD--DKLIGTSQQHSTKIQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDV---PAGKF--DMSGSRVTNLEGREVPIVYRYVENAIL 1374
+SAR++ ++ + VL+ DV +FFQA+PF + + F + + IG+ +S + G L R +++ SG ++GT+ ++DY R M++ L++ + G D H+ ++ + V ++ SGP+ + P F D G V N +G +PI+++Y + +L
Sbjct: 115 TSARYLYYYLYIAANKDRFSNVLLTDVRDVFFQADPFSYPTNSELNFFLEHPNARIGSCPVNSFWFRGLYGEEDLKRHSERRVSCSGTTIGTTEGILDYLRSMTDELTATNARMTNVDGTDQAAHNGMIVNEKVSNYRIWENGSGPILTLGYEPVDNFLPDEEGL-VRNFDGSIIPIIHQYDRHQVL 300
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Match: A0A0A2VBV4_9BACI (Uncharacterized protein n=1 Tax=Pontibacillus chungwhensis BH030062 TaxID=1385513 RepID=A0A0A2VBV4_9BACI) HSP 1 Score: 67.0 bits (162), Expect = 1.310e-8 Identity = 62/222 (27.93%), Postives = 96/222 (43.24%), Query Frame = 1
Query: 619 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRK-YHPSSARWIMIQRFLDVKGPEYERVLMVDVGQIFFQANPFDIIGDPGVYTFTDDKLIGTSQQHSTK-IQDCLGASVLARLADKPAIHSGVSLGTSSLVVDYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPVTDV 1278
+L +G+ S + F S + S ++ MFFE E N T + IS E L K + R + FL G Y +VL+ DV +FFQ NPFD G T ++L + +TK I G + +L ++ I +G + G + L++ Y +M L + + D +H+YL++SG VQ V D GP+ V
Sbjct: 8 NLIMGLISHYSWEDIKPFFLSLEKVNYSGEVVMFFEHINEETQN----TLKNLNVNISLIPYERIGLEKTFDIIDYRHYLYLNFLRAHGHRYNKVLLTDVRDVFFQLNPFDAGWSDGSITVAKEELKIKDEYWNTKWILTKFGNHIYQQLENETIICAGTTYGPTELILAYLEEMVYHLFQLHY--FPQIINDQAVHNYLIHSGKVQPVAYSDNEKGPIMTV 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6587.17422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6587.17422.1 >prot_Ecto-sp13_S_contig6587.17422.1 ID=prot_Ecto-sp13_S_contig6587.17422.1|Name=mRNA_Ecto-sp13_S_contig6587.17422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=525bp MAVLKAHRVHKTHNLLGRAGSGLGRRRGSGLDQYSRSDSLKHGEYNRACRback to top mRNA from alignment at Ecto-sp13_S_contig6587:548..5812- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6587.17422.1 ID=mRNA_Ecto-sp13_S_contig6587.17422.1|Name=mRNA_Ecto-sp13_S_contig6587.17422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5265bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6587:548..5812- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6587:548..5812- >mRNA_Ecto-sp13_S_contig6587.17422.1 ID=mRNA_Ecto-sp13_S_contig6587.17422.1|Name=mRNA_Ecto-sp13_S_contig6587.17422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1575bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6587:548..5812- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |