prot_Ecto-sp13_S_contig65828.17415.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65828.17415.1
Unique Nameprot_Ecto-sp13_S_contig65828.17415.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: D7FXG1_ECTSI (ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG1_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 3.000e-40
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGC DTGAPIMVPVGQETLGRIMNVIGEPVDERGPI+SK
Sbjct:   63 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCTDTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSK 138          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A836CJ45_9STRA (ATP synthase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ45_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.220e-35
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            V+VA G  RLVLEVAQHLGENTVRTIAMEATEGLTRGQ C+DTG+PIMVPVG ETLGRIMNVIGEPVDERGPI+SK
Sbjct:   62 VDVAKGEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQKCLDTGSPIMVPVGAETLGRIMNVIGEPVDERGPIESK 137          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A0H5RHB2_9EUKA (ATP-synt_ab_N domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RHB2_9EUKA)

HSP 1 Score: 119 bits (297), Expect = 5.400e-33
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    9 RLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            R+VLEVAQHLGENTVRTIAME T+GL RGQ C+DTG PIMVPVG ETLGRIMNVIGEPVDERGPI++K
Sbjct:   25 RIVLEVAQHLGENTVRTIAMEGTDGLVRGQECVDTGNPIMVPVGPETLGRIMNVIGEPVDERGPINAK 92          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A3Q2Z6M8_HIPCM (ATP-synt_ab_N domain-containing protein n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2Z6M8_HIPCM)

HSP 1 Score: 118 bits (295), Expect = 1.550e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   36 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 111          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A3Q2XQ03_HIPCM (ATP-synt_ab_N domain-containing protein n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2XQ03_HIPCM)

HSP 1 Score: 118 bits (295), Expect = 3.350e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   36 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 111          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A671UU56_SPAAU (ATP synthase subunit beta, mitochondrial n=5 Tax=Clupeocephala TaxID=186625 RepID=A0A671UU56_SPAAU)

HSP 1 Score: 118 bits (296), Expect = 5.110e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   75 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 150          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A8C5BY90_GADMO (ATP synthase subunit beta, mitochondrial-like n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BY90_GADMO)

HSP 1 Score: 118 bits (296), Expect = 5.110e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   75 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLVRGQRVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 150          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A4W6FLR8_LATCA (ATP synthase F1 subunit beta n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6FLR8_LATCA)

HSP 1 Score: 118 bits (296), Expect = 6.000e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   67 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLVRGQQVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 142          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A669B7E8_ORENI (ATP synthase F1 subunit beta n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669B7E8_ORENI)

HSP 1 Score: 118 bits (296), Expect = 7.400e-32
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   75 LEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPISTK 150          
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Match: A0A7N5ZS80_ANATE (ATP synthase subunit beta, mitochondrial-like n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N5ZS80_ANATE)

HSP 1 Score: 117 bits (294), Expect = 1.030e-31
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIDSK 76
            + VA   SRLVLEVAQHLGENTVRTIAM+ TEGL RGQ  +DTGAPI +PVG ETLGRIMNVIGEP+DERGPI +K
Sbjct:   76 LEVAGRDSRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTK 151          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65828.17415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG1_ECTSI3.000e-4097.37ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ45_9STRA3.220e-3588.16ATP synthase subunit beta n=1 Tax=Tribonema minus ... [more]
A0A0H5RHB2_9EUKA5.400e-3385.29ATP-synt_ab_N domain-containing protein (Fragment)... [more]
A0A3Q2Z6M8_HIPCM1.550e-3277.63ATP-synt_ab_N domain-containing protein n=2 Tax=Hi... [more]
A0A3Q2XQ03_HIPCM3.350e-3277.63ATP-synt_ab_N domain-containing protein n=1 Tax=Hi... [more]
A0A671UU56_SPAAU5.110e-3277.63ATP synthase subunit beta, mitochondrial n=5 Tax=C... [more]
A0A8C5BY90_GADMO5.110e-3277.63ATP synthase subunit beta, mitochondrial-like n=1 ... [more]
A0A4W6FLR8_LATCA6.000e-3277.63ATP synthase F1 subunit beta n=1 Tax=Lates calcari... [more]
A0A669B7E8_ORENI7.400e-3277.63ATP synthase F1 subunit beta n=1 Tax=Oreochromis n... [more]
A0A7N5ZS80_ANATE1.030e-3177.63ATP synthase subunit beta, mitochondrial-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 47..76
e-value: 1.9E-6
score: 29.2
NoneNo IPR availableGENE3D2.40.10.170coord: 1..46
e-value: 3.7E-17
score: 63.9
NoneNo IPR availablePANTHERPTHR15184:SF44ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIALcoord: 3..75
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 3..75
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 7..44
e-value: 4.0E-12
score: 46.5
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilySUPERFAMILY50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 5..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65828contigEcto-sp13_S_contig65828:7..730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65828.17415.1mRNA_Ecto-sp13_S_contig65828.17415.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65828 7..730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65828.17415.1 ID=prot_Ecto-sp13_S_contig65828.17415.1|Name=mRNA_Ecto-sp13_S_contig65828.17415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
VNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCMDTGAPIMVP
VGQETLGRIMNVIGEPVDERGPIDSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004100ATPase_F1/V1/A1_a/bsu_N
IPR036121ATPase_F1/V1/A1_a/bsu_N_sf