mRNA_Ecto-sp13_S_contig6581.17414.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: D7FXG0_ECTSI (ATP-synt_DE_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG0_ECTSI) HSP 1 Score: 257 bits (657), Expect = 1.350e-85 Identity = 146/169 (86.39%), Postives = 152/169 (89.94%), Query Frame = 1
Query: 1 MLGVAARRVAGAARPALRTARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRA---AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLAS 498
MLGVAARRVAGAARPALRTARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQV P S G+ G+TAG P +++ V+ AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLAS
Sbjct: 1 MLGVAARRVAGAARPALRTARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGVVQVVHEAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLAS 169
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A836CK87_9STRA (ATP-synt_DE_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK87_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.760e-31 Identity = 81/171 (47.37%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 1 MLGVAARRVAGAARPALRTARCFSTAEA--PAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRA---AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLAS 498
M+G A RR A A R +LR STAEA P + LNFCLPH+ IY DK VD V P G G+T G S++ V+ AG EPEN+FVSAGFALTHP SVTDITA+EAV+V+++D AVK +++ AK ++ AA++ +E AQ+ + T + M A+G+ L++
Sbjct: 1 MIGHALRRSAPALRASLRH---MSTAEAAKPTGLTLNFCLPHKPIYVDKAVDTVIIPGVAGVYGVTQGHSAVISEMQPGLVKIYHEAGGEPENWFVSAGFALTHPNSVTDITAVEAVKVDDMDPEAVKDTFNQAKSDLAAASD-EKERVAAQIQMSTAQVMGQALGLNLSA 167
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A1Z5JNE2_FISSO (F-type H+-transporting ATPase subunit delta n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNE2_FISSO) HSP 1 Score: 118 bits (295), Expect = 1.030e-30 Identity = 70/148 (47.30%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 61 RCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRAAGQE----PENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVL 492
RC ST EA +KLNFCLP ET+YK V V P G+ GITA +P S++ V+ +E PE +FV+ G+ALTHP S TD+ EAV++++ID V YDAA+ + +AT GS E AEAQ+ +E TK M AIGV L
Sbjct: 16 RCMST-EAATAVKLNFCLPQETLYKGASVHSVILPGMGGEYGITANHVPYVSQLKPGVVKILHEEGSADPEKYFVAGGYALTHPDSTTDVICPEAVKLDDIDPSEVAKKYDAARTKFSSATAGSIEQAEAQIEMEITKEMGMAIGVSL 162
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A7S1DDA2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDA2_CYCTE) HSP 1 Score: 111 bits (278), Expect = 7.720e-28 Identity = 66/150 (44.00%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 58 ARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRAAGQ----EPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLA 495
AR S+ + +KLNF LPHETIY +V QV P S G+ G+ A +P S++ + ++ + EPE +FVS GFALTH TS+T+I+ EAV++++ID AV S+D AK +A GS AEAQ+A+E +K+M A+G++LA
Sbjct: 41 ARWMSSEASSGKIKLNFSLPHETIYSGVEVAQVIIPGSEGEYGVAANHVPYISQLKAGVLQIIHEDGAGEPEKYFVSGGFALTHETSLTEISCPEAVKLDDIDSAAVSKSFDEAKAAYASAEAGSIAQAEAQIAMEVSKSMGMAVGLMLA 190
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A7S1UY04_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY04_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.560e-26 Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 55 TARCFST-AEAPAV--MKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRA--AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIG 483
TAR FS+ A APA M LNF LP ET+Y +VDQV P G+ GITA +P S++ + ++ EPE +FVS GFALTH S TDI+ AV+++++D AV S+YDAAK +A GS AEAQ+ ++ K+M +A+G
Sbjct: 14 TARAFSSEAAAPASGKMTLNFSLPDETVYAGAEVDQVIVPGEAGEYGITANHVPIVSELKAGVLQILHGDGEPEKYFVSGGFALTHDDSSTDISCPVAVKLDDLDSSAVSSNYDAAKSAFASAEAGSIAQAEAQIEMDVNKSMGSALG 161
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A7R9U2Q0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Q0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.760e-20 Identity = 57/141 (40.43%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 79 EAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRA---AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVL 492
EA +KLN P ETIY K VD V P + G+ G+TAG P +++ + V+ + E FFVS GFAL+H TDI+A E R+E++DE A+++ + A ++ +A + + +A EAQ+ +ET KAM AA+G+ L
Sbjct: 55 EAAEGLKLNLASPSETIYSKKVVDSVIVPGADGEYGVTAGHSPIVAELKAGVVQVLHKGSADAEKFFVSGGFALSHEDDTTDISAPEIARLEDLDENAIRTGFADATTKLSSAGDETAKA-EAQIEMETFKAMGAALGIAL 194
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A0G4IRP4_PLABS (ATP-synt_DE_N domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRP4_PLABS) HSP 1 Score: 89.7 bits (221), Expect = 1.550e-19 Identity = 52/143 (36.36%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 70 STAEAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRAA---GQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVV 489
S P+ ++LN +PH+ + K+++V QV+ P +G+ G+ AG +P +++ V G++P +FVS GFA H S TDI+A+EAV ++E+D AVK++ A+ + A + +E A AQ+A++ MA A+GVV
Sbjct: 27 SAGGVPSKLRLNMVVPHQILVKNEEVRQVTIPSPNGEFGVLAGHVPVVTELQPGVVTIEFGDGKDPVKYFVSGGFAFVHGNSTTDISAVEAVPLDELDPEAVKANLKEAEGSL-AGAKDDKEKAVAQIAIDVNNKMALALGVV 168
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A7S3BYI9_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYI9_9VIRI) HSP 1 Score: 89.0 bits (219), Expect = 4.900e-19 Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 85 PAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSS--TVRAAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAA 477
PA + LNF LPH + +VD V+ P G +G+ G +P+ +++ TV + + +FVS+G+ + HPTSVTD+TA+EAV +E+ID A K + AK + +A++ +A EAQV VE AMAAA
Sbjct: 57 PAKLTLNFYLPHGVEFDAAEVDSVTVPAESGDMGVLPGHMPSVARLRPGVLTVNTTDSDVKKYFVSSGYVMVHPTSVTDVTAMEAVPLEQIDADAAKKGLEDAKAALASASDDLAKA-EAQVGVEVFTAMAAA 188
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A0H5R4T8_9EUKA (ATP-synt_DE_N domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4T8_9EUKA) HSP 1 Score: 88.2 bits (217), Expect = 5.280e-19 Identity = 49/139 (35.25%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 73 TAEAPAVMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSSTVRA---AGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAI 480
T A ++LNF +PH+ I K+++V QV+ P + G+ G+ AG +P +++ V G +P +FVS GFA H S TDI+A+EA+ ++E D A++ + AA+ ++ AAT+ +E A AQ+ ++ K + A +
Sbjct: 25 TKSATPKLRLNFNVPHQAIVKNEEVHQVTIPGTEGEFGVLAGHVPIVAELQPGVVTVDYGKGDKPSKYFVSGGFAFVHQNSTTDISAVEAIPLDEFDPSAIQDNLQAAQAQLAAATDP-KEKAIAQIMIDVNKKLQACV 162
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Match: A0A6U2ATR5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2ATR5_HEMAN) HSP 1 Score: 86.7 bits (213), Expect = 2.960e-18 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 1
Query: 1 MLGVAARRVAGAARPA---LRTARCFSTAEAPA-----VMKLNFCLPHETIYKDKDVDQVSAPRSHGKIGITAGMIPNGSKISSST--VRAAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAI 480
ML AA R +ARPA L AR + APA + LN PHE I+ ++VD V P + G G+ G +P S++ V A + + FF+S+GFA H S DI A+EAV+++++D+ AV+S A++E+ + T+ E A+AQ+AV+T AMA A+
Sbjct: 8 MLARAAARTLRSARPAATRLSGARWMAEDAAPAGGIPSKLTLNLLAPHEAIFHKQEVDMVIIPGAAGMFGVLPGHVPTISELKPGLLEVTVAPGDTQKFFISSGFAFAHANSTLDICAVEAVKLDDLDQSAVESGKAQAEKELASQTD-EVEKAKAQIAVDTYTAMAEAL 176 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6581.17414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6581.17414.1 >prot_Ecto-sp13_S_contig6581.17414.1 ID=prot_Ecto-sp13_S_contig6581.17414.1|Name=mRNA_Ecto-sp13_S_contig6581.17414.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp MLGVAARRVAGAARPALRTARCFSTAEAPAVMKLNFCLPHETIYKDKDVDback to top mRNA from alignment at Ecto-sp13_S_contig6581:4852..8017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6581.17414.1 ID=mRNA_Ecto-sp13_S_contig6581.17414.1|Name=mRNA_Ecto-sp13_S_contig6581.17414.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3166bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6581:4852..8017- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6581:4852..8017- >mRNA_Ecto-sp13_S_contig6581.17414.1 ID=mRNA_Ecto-sp13_S_contig6581.17414.1|Name=mRNA_Ecto-sp13_S_contig6581.17414.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6581:4852..8017- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |