prot_Ecto-sp13_S_contig658.17411.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig658.17411.1
Unique Nameprot_Ecto-sp13_S_contig658.17411.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length298
Homology
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BLAST of mRNA_Ecto-sp13_S_contig658.17411.1 vs. uniprot
Match: D7G4S7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S7_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.320e-34
Identity = 288/297 (96.97%), Postives = 291/297 (97.98%), Query Frame = 0 
Query:    1 MRRECAQHQCTTMPTYGTARSKKPEYCAKHKHPGMVDVLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVYAKTQGKRVGNAPDRIPPRTKKRPRQPGDVPSAQAAVKQEPDQGMPLQSESFVSRARSIGEEAKSD 297
            MRRECAQHQCTTMPTYGTARSKKPEYCAKH+HPGMVDVLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NAVYAKTQGKR  NAPDRIPPRTKKRPRQPGDVPS QA VKQEPDQGMPL+SESFV RAR+IGEEAKSD
Sbjct:    1 MRRECAQHQCTTMPTYGTARSKKPEYCAKHRHPGMVDVLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVYAKTQGKRARNAPDRIPPRTKKRPRQPGDVPSVQAPVKQEPDQGMPLESESFVPRARNIGEEAKSD 297
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BLAST of mRNA_Ecto-sp13_S_contig658.17411.1 vs. uniprot
Match: A0A6H5JHF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHF4_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.560e-20
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 
Query:    1 MRRECAQHQCTTMPTYGTARSKKPEYCAKHKHPGMVDVLNR 41
            MRRECAQHQCTTMPTYGTA+SKKPEYCAKHKHPGMVDVLNR
Sbjct:   30 MRRECAQHQCTTMPTYGTAQSKKPEYCAKHKHPGMVDVLNR 70
[Close]
BLAST of mRNA_Ecto-sp13_S_contig658.17411.1 vs. uniprot
Match: A0A6H5JEU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.230e-15
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:  229 NAVYAKTQGKRVGNAPDRIPPRTKKRPRQPGDVPSAQAAVKQEPDQGMPLQSE 281
            NAVYAKTQGKR  NAPDRI  RTKKRPRQPGDVPS QA VKQEP QGMPL+S+
Sbjct:  157 NAVYAKTQGKRARNAPDRITSRTKKRPRQPGDVPSVQAPVKQEPGQGMPLESQ 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig658.17411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4S7_ECTSI3.320e-3496.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JHF4_9PHAE2.560e-2097.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEU0_9PHAE1.230e-1583.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig658contigEcto-sp13_S_contig658:6529..7912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig658.17411.1mRNA_Ecto-sp13_S_contig658.17411.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig658 6449..10215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig658.17411.1 ID=prot_Ecto-sp13_S_contig658.17411.1|Name=mRNA_Ecto-sp13_S_contig658.17411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp
MRRECAQHQCTTMPTYGTARSKKPEYCAKHKHPGMVDVLNRRCGHPACSK
TPSYGLQGTKTAIFCVKHSKRGMVNVISRRCVNNECDKLASFGCTGTKKA
EYCTVHAKEGMSNVLDRVCSHLGCNKQPNFGVDGSKRAEFCQEHAKEGMI
NVRSRKCAHPLCTTRASFGPHGTKTPAFCSRHAKDGMINVRCRSCAHPTC
FKRPYYCAEGSTRPEFCSQHAKPGMVNVNAVYAKTQGKRVGNAPDRIPPR
TKKRPRQPGDVPSAQAAVKQEPDQGMPLQSESFVSRARSIGEEAKSD*
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