prot_Ecto-sp13_S_contig6577.17406.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6577.17406.1
Unique Nameprot_Ecto-sp13_S_contig6577.17406.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 5.470e-78
Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQMRKEDGGDDEPTA 129
            MLSRMVPFF+LPALGGVGVFV VYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERM+MNRRQRRQMRKEDGGDDEP A
Sbjct:  195 MLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMSMNRRQRRQMRKEDGGDDEPAA 323          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 6.540e-63
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQER 106
            MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQ R
Sbjct:  195 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQAR 300          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.070e-33
Identity = 69/126 (54.76%), Postives = 97/126 (76.98%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQMRKEDGGDDE 126
            ML+RM+PFF+LP L GVGVFV  +VL+ +YD +    +VA+ATQAPF ++L GITYAI+SASWD +REG+  GFDE + N G I+EGLRRSS+R ++++ L +QE+  +NR +RR  R++ GG D+
Sbjct:  144 MLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPEREGSALGFDEFRSNAGAILEGLRRSSERQELDEQLEEQEKR-VNRAERR--RQKGGGSDD 266          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 8.200e-23
Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDML 101
            ML RMVP F LP + G+  FVA Y    K    +   +VAY+TQAPFF+ L G++Y ++SASWDED EG+F G +E + N G + +G++R+++R D+ED +
Sbjct:  142 MLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDEDEEGSFLGIEEFQTNVGRLFDGVQRAAERRDLEDEI 242          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.210e-20
Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSD 93
            ML RM+P   +P  GG+ +FV  Y+ + K+D  I   +VAYAT AP+ + LAG+TY I+SASWD + EG+F G +E K N   I +GLRR+ +
Sbjct:  128 MLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEVEGSFLGTEEVKLNLSRIADGLRRAGE 220          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A0G4F121_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F121_VITBC)

HSP 1 Score: 87.4 bits (215), Expect = 2.170e-18
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 0
Query:    2 LSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMTMNRRQRRQ----MRKEDGGD 124
            +SR+VPFFL P       F+  ++L  ++DY I   I+AY TQ  F +AL G++Y I+S+SW+EDREG+F+G DE KRN   +  G+R++    +    +  +  M +  RQ +Q    +R   GGD
Sbjct:  128 ISRIVPFFLTPLAFAFSTFIGGFLLYSQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQTVKDTETRQRMETRRDMVIKYRQDQQAMDDIRGRGGGD 254          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: W7TZB0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.140e-17
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRS 91
            ML R++PF L P LGG+G+F     L+   +  +P   VA++TQ PF  AL GITY+IMS SW+ + EG+F+GF E K N  N+++ L+++
Sbjct:  181 MLKRLLPFILFPVLGGIGLFGFYLYLAKNTEIDVPPAFVAFSTQVPFLAALVGITYSIMSTSWEPEVEGSFWGFTEFKANVLNLLDSLQKT 271          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A7S1FXG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXG4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.030e-17
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 0
Query:    3 SRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVED---MLADQE----RMTMNRRQRRQMRK 119
             RM+PF  LP  GG+G+FVA +  +   D      IVA +T A   V L GITY++MSASWD+DR+G+  GFDE  +N  +I  GL RS +   + D   +L D+E    R  + RR+ ++ RK
Sbjct:  147 KRMIPFVGLPLFGGMGLFVAFWYFATYRDVEFQPAIVAASTIALLVVGLLGITYSLMSASWDDDRDGSALGFDELSKNVDSIKSGLGRSRENAKIRDRARLLTDEEIEAARAELKRREEKERRK 270          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A7S2NSH2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NSH2_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 6.640e-16
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    1 MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNF 81
            ML+R+VPF  LP  GG  VFV  Y  + + +  +P  IVAYATQ    ++ AGITY +MS SWDE++EGT  G +  KRNF
Sbjct:  153 MLNRVVPFAALPVFGGALVFVGFYYANTQLELDVPPMIVAYATQVLLLLSFAGITYGVMSTSWDEEKEGTLLGTENLKRNF 233          
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Match: A0A7R9W9T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9T7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.480e-15
Identity = 43/89 (48.31%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    3 SRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRS 91
             RM+PF  +P  G +G FVA + L+   D       VA  T A   V L GITY+++SASWD DREG+ FG DE  RN G + EGL RS
Sbjct:   38 KRMLPFVGIPLFGSMGTFVAFWYLATYKDMEFQPAAVATTTVAFLAVGLLGITYSVLSASWDPDREGSAFGADEFNRNVGELKEGLSRS 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6577.17406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB7_ECTSI5.470e-7896.90All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0S3_9PHAE6.540e-6399.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7Y5_9STRA1.070e-3354.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0UN43_9STRA8.200e-2346.53Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2STX2_9STRA5.210e-2047.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4F121_VITBC2.170e-1838.58Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7TZB0_9STRA3.140e-1745.05Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S1FXG4_9STRA4.030e-1741.94Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2NSH2_9EUKA6.640e-1650.62Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7R9W9T7_9STRA2.480e-1548.31Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021855PAM68-likePFAMPF11947DUF3464coord: 1..90
e-value: 1.4E-23
score: 83.3
IPR021855PAM68-likePANTHERPTHR34575FAMILY NOT NAMEDcoord: 1..94
NoneNo IPR availablePANTHERPTHR34575:SF1PROTEIN PAM68, CHLOROPLASTICcoord: 1..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6577contigEcto-sp13_S_contig6577:5200..7666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6577.17406.1mRNA_Ecto-sp13_S_contig6577.17406.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6577 4460..7762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6577.17406.1 ID=prot_Ecto-sp13_S_contig6577.17406.1|Name=mRNA_Ecto-sp13_S_contig6577.17406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
MLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVA
LAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDM
LADQERMTMNRRQRRQMRKEDGGDDEPTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021855PAM68-like