prot_Ecto-sp13_S_contig12039.1740.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12039.1740.1
Unique Nameprot_Ecto-sp13_S_contig12039.1740.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12039.1740.1 vs. uniprot
Match: D7FMP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP4_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 2.130e-96
Identity = 169/193 (87.56%), Postives = 176/193 (91.19%), Query Frame = 0 
Query:    1 TRANEEHRLSSRCRHHQHRKGTPRRSPERSNRRAKEGEKIPATIAAPASHRSGRGGDXTSRXARQKEPRASARSAGTAASFCSSKSGRGLPASYCESGVPSGRTTSRSLTSSAAISRTDYSTDTPRETVRTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQERILSKENNKKRGHRLTAPPRTTR 193
            T A E+ RLSSRCRHHQ  KGTPRRS ERSNRR KEGE+IPATIAAPASHRSG GGD T+R AR +EP ASARSAGTAASF SSK GRGLP++YC SGVPSGRTTSRSLTSSAAIS TDY+TDTPRETVRTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQERILSKENNKKRGHRL APPRTTR
Sbjct:    8 TTAKEQSRLSSRCRHHQQCKGTPRRSLERSNRRPKEGEEIPATIAAPASHRSGGGGDGTNRTARHEEPTASARSAGTAASFSSSKGGRGLPSAYCGSGVPSGRTTSRSLTSSAAISLTDYATDTPRETVRTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQERILSKENNKKRGHRLAAPPRTTR 200
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12039.1740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMP4_ECTSI2.130e-9687.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12039contigEcto-sp13_S_contig12039:3351..5092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12039.1740.1mRNA_Ecto-sp13_S_contig12039.1740.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12039 3351..5092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12039.1740.1 ID=prot_Ecto-sp13_S_contig12039.1740.1|Name=mRNA_Ecto-sp13_S_contig12039.1740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
TRANEEHRLSSRCRHHQHRKGTPRRSPERSNRRAKEGEKIPATIAAPASH
RSGRGGDGTSRTARQKEPRASARSAGTAASFCSSKSGRGLPASYCESGVP
SGRTTSRSLTSSAAISRTDYSTDTPRETVRTTTTMAMSTARAEATLAVLE
AERAQLEHRLKKVEDELRQERILSKENNKKRGHRLTAPPRTTR*
back to top