prot_Ecto-sp13_S_contig6576.17403.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6576.17403.1
Unique Nameprot_Ecto-sp13_S_contig6576.17403.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length849
Homology
BLAST of mRNA_Ecto-sp13_S_contig6576.17403.1 vs. uniprot
Match: D8LIC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC9_ECTSI)

HSP 1 Score: 1253 bits (3243), Expect = 0.000e+0
Identity = 775/849 (91.28%), Postives = 781/849 (91.99%), Query Frame = 0
Query:    1 QLAERYTVEVRRPIDLTTVARRVRRGTYDDSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRAARYRLCWRVQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPPVEXXXXXXXXXXXXXXXXXXXXXXGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPALTPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNLRDLETTMYMPQPAPAAGLTGFTMEPSSEEVGTTGTPASDTDTSSGESXXXXXXESNADSASPPTAECSSXXXXXXXXXXXXXXXXSCTAAVAGSASSAGGPHRDSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVGAGTTGSTASREGLNAAGGGKGRSGGLPAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPVKVEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIENLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSGSSAATASPRPSASEGSAKHPPVSPAASGTAVPASSGXXXXXXXXXXXXXXXXXXXVSSPCCSSLSRGSGDXXXXXXXXXXXSRAYGSSAFRGVNLNGNRWLARISQ 849
            +LAERYTVEVRRPIDLTTVARRVRRGTYD+SAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALR ARYRLCWR QLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPP   XXXXXXXXXXXXXXXXXXX   GEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPA  PPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNLRDLET+MYMPQP PAAGL G TMEPSSEE+  TGTPASDTDTSSGES      ESNAD ASPPTAECSS XXXXXXXXXXXX   SCTAAVAGSASS GGPHRDSLG XXXXXXXXXXXXXXXXXXXXX            +TG  +  EGLNAAGGGKGRSGGL AWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAP KVEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIENLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTS SSAATASPRPSASEGSAKHPP SPAASGTA      XXXXXXXXXX          SSP CSSLSRGSGD  XXXXXXXX SRAYGSSAFRGVNLNGNRWLARISQ
Sbjct:   26 ELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPXXXXXXXXXXXXXXXXXXXXXX---GEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNLRDLETSMYMPQPEPAAGLNGLTMEPSSEELHQTGTPASDTDTSSGESTLESDTESNADLASPPTAECSSSXXXXXXXXXXXXP--SCTAAVAGSASSVGGPHRDSLGGXXXXXXXXXXXXXXXXXXXXXLLL---------STG-VSHFEGLNAAGGGKGRSGGLSAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIENLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSDSSAATASPRPSASEGSAKHPPASPAASGTAXXXXXXXXXXXXXXXXPSSANGGDSASSPGCSSLSRGSGDRGXXXXXXXXSSRAYGSSAFRGVNLNGNRWLARISQ 859          
BLAST of mRNA_Ecto-sp13_S_contig6576.17403.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.220e-35
Identity = 137/400 (34.25%), Postives = 184/400 (46.00%), Query Frame = 0
Query:    1 QLAERYTVEVRRPIDLTTVARRVRRGTYDDSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRAARYRLCWRVQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPPVEXXXXXXXXXXXXXXXXXXXXXXGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPALTPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQ--AKGTKGNNRNG---AVVEFFGLHEFALLKPDAL--RPLSTLDKSPNKTVSKNKRWDPTMEEA 393
            ++A  Y   VRRP+DL+TVARR+RRG+Y D AG++ RDI+RIF NCERFN+ S +L++  ARHL+AL +  +AE+ L   GE+ A +  R  A RA R+   W   L  P                  A    A                       +  T+G     A  ALGL     PP  XXXX                     A   A A+W  G       A+  A  GE                   AW  +  AL+  T  +A   ARGT  SS+WARP  LVWAKQAKNTFWPAM+L  +     L  +N  R+P A    LE++  A+G   + ++     +VEF G HEF  L+ DA   RPLS    +P++   K + ++  + EA
Sbjct: 2283 EIAIAYARAVRRPMDLSTVARRLRRGSYPD-AGKVYRDISRIFRNCERFNVDS-RLYINTARHLQALIDGLFAETGLALSGETAAETAARATASRARRFAAVWHAALLPPF----------------TARVAAAXXXXXXXXXXXXXXXXXXXXXXQDGVTVGAAVLHARAALGL-----PPXXXXXXH--------------------AQAAAEAEWAVG-------ASSVARDGE-------------------AWGDVVNALAQLTPELAEAVARGTEISSIWARPCALVWAKQAKNTFWPAMMLGRAAQGEQLTPINAARMPAAIFNMLEQRGPARGAPSSAQHADSHVIVEFLGTHEFGWLRDDAASARPLSDAAAAPHQKAPKKRAYEAALGEA 2613          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6576.17403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIC9_ECTSI0.000e+091.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC34_9STRA1.220e-3534.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 684..711
NoneNo IPR availableGENE3D2.30.30.140coord: 284..408
e-value: 1.0E-9
score: 40.3
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 114..822
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 284..397
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..77
e-value: 4.9E-12
score: 47.6
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 4..74
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 6..51
e-value: 2.2E-6
score: 27.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..57
score: 11.146
IPR000313PWWP domainPFAMPF00855PWWPcoord: 288..396
e-value: 1.6E-7
score: 31.6
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 289..372
score: 9.09

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6576contigEcto-sp13_S_contig6576:133..6963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6576.17403.1mRNA_Ecto-sp13_S_contig6576.17403.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6576 133..6963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6576.17403.1 ID=prot_Ecto-sp13_S_contig6576.17403.1|Name=mRNA_Ecto-sp13_S_contig6576.17403.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=849bp
QLAERYTVEVRRPIDLTTVARRVRRGTYDDSAGRLRRDIARIFTNCERFN
MCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRAARYR
LCWRVQLRGPLREAARQAVRAASAAALAAGGPGANGVSREFSEDILPMLS
GEGEESNEEWTLGLFAERACLALGLRANQPPPVEEVCPGGGGGAAAAAAA
AAAAAAGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPALTPPPVAT
AAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKN
TFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVV
EFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNL
RDLETTMYMPQPAPAAGLTGFTMEPSSEEVGTTGTPASDTDTSSGESTLE
SDTESNADSASPPTAECSSSSCSSSSSSSSPFPAPSCTAAVAGSASSAGG
PHRDSLGGGGAPPSLTAMSPPPPPSRTSPPPAATAATVGAGTTGSTASRE
GLNAAGGGKGRSGGLPAWRLALKRPLEELTPKERALEKVCRYLDKFGDMF
SPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMG
APVKVEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIEN
LQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSGSSAATAS
PRPSASEGSAKHPPVSPAASGTAVPASSGSAAAGTTSATPSSADGGDSVS
SPCCSSLSRGSGDRGGGAAGASSSSRAYGSSAFRGVNLNGNRWLARISQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain
IPR000313PWWP_dom