prot_Ecto-sp13_S_contig6556.17381.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6556.17381.1
Unique Nameprot_Ecto-sp13_S_contig6556.17381.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length228
Homology
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A6H5K6R3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6R3_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 9.300e-142
Identity = 208/227 (91.63%), Postives = 211/227 (92.95%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELQKKQAGGKGFHTSAACFSALQPGTGEPASDPLPRTLFSASDDGELTDGIATRRPSSGASQYPSLETRPLSFWWGTGTERETHRNGEAFSTTAIGPDELGSGIALDLSRMSLTGRSAGEQQARSPLRAVLASHLSLLGPAACSVIGLRVDAEEEARDTR 227
            VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELQKKQAGGKGFHTSAACF+ALQPG GEPASD  PRTLFSASDDGEL+DGIATRRPSS  SQ P LET PLS WWGTG ERETHRNGEA STTA GPDELG GIALDLSRMSLT RSAG+QQA SPLRAVLASHLSLLGPAACSVIGL VDAEEEARDTR
Sbjct:   37 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELQKKQAGGKGFHTSAACFNALQPGAGEPASDSPPRTLFSASDDGELSDGIATRRPSSAVSQSPPLETGPLSSWWGTGAERETHRNGEAVSTTASGPDELGGGIALDLSRMSLTERSAGDQQAWSPLRAVLASHLSLLGPAACSVIGLLVDAEEEARDTR 263          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7S2KAU0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAU0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.280e-20
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWK 67
            +GTYNP+A + G+KEV  K DR +YW+SVGAQPSDRV WLLG+FGILPP  VP  R ++++P++E K
Sbjct:   49 LGTYNPIANKDGIKEVRLKSDRFKYWLSVGAQPSDRVGWLLGKFGILPPPPVP-HRPQRSIPKEERK 114          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A6U0J4Z2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0J4Z2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.720e-20
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKE 65
            VGTYNP+A  +G+KE+  K DR+RYW+SVGAQPSDRVAW+LG+FG+LPP   P    ++ VPRK+
Sbjct:   37 VGTYNPIANSAGIKEIRLKTDRLRYWLSVGAQPSDRVAWILGKFGVLPPPP-PRYSVEKMVPRKD 100          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: B8BU89_THAPS (RT16, ribosomal protein 16 mitochondrial small ribosomal subunit (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8BU89_THAPS)

HSP 1 Score: 89.7 bits (221), Expect = 9.300e-20
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 49
            VGTYNP+A  +G+KE+  K DR+RYWISVGAQPSDRVAW+LG+FGILPP
Sbjct:   37 VGTYNPIANNAGIKEIRLKADRLRYWISVGAQPSDRVAWILGKFGILPP 85          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7S1VML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VML7_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.090e-19
Identity = 36/49 (73.47%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 49
            +GTYNP+ATR+G+KE+  K DRI+YW+SVGAQPSDRV+W+LG+FGILPP
Sbjct:   37 IGTYNPIATRAGLKEIRLKTDRIKYWLSVGAQPSDRVSWILGKFGILPP 85          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7S1ZG56_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG56_TRICV)

HSP 1 Score: 90.1 bits (222), Expect = 1.090e-19
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKE 65
            VGTYNP+A  SG+KE+  K DR+RYW+SVGAQPSDRVAW+LG+FGILPP   P    ++ +P+K+
Sbjct:   37 VGTYNPIANASGIKEIRLKTDRLRYWLSVGAQPSDRVAWILGKFGILPPPP-PRYSPQRMIPKKD 100          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7S4NGP0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGP0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-19
Identity = 39/71 (54.93%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELQK 71
            +GTYNP+A + G+KE+  K DR++YW+SVGAQPSDRVAW+LG+FGILPP   P    ++ +P+K+ +E +K
Sbjct:   37 LGTYNPMANKHGIKEIRLKTDRLKYWVSVGAQPSDRVAWVLGKFGILPPPP-PRYSPQRMIPKKDREEQEK 106          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7R9W8Z9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8Z9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.920e-19
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKE 68
            VGTYNP+A + G+KE+  K DR++YW+SVGAQPSDRVAW+LG+FGILPP   P    +  +P+K+ +E
Sbjct:   35 VGTYNPIANKHGIKEIRLKTDRLKYWLSVGAQPSDRVAWILGKFGILPPPP-PRYSPQNMIPKKDREE 101          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A1Z5K548_FISSO (Small subunit ribosomal protein S16 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K548_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 4.140e-19
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 49
            VGTYNP+A R GVKE+  K DR++YW+SVGAQPSDRV+W+LG+FGILPP
Sbjct:   37 VGTYNPIANRDGVKEIRLKTDRLKYWLSVGAQPSDRVSWILGKFGILPP 85          
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Match: A0A7S3PWJ7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWJ7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.670e-19
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKE 65
            VGTYNP+AT+ G+KE+  K DR++YW+ VGAQPSDRV+W+LG+FG+LPP    V+  K  +P+K+
Sbjct:   37 VGTYNPIATKEGIKEIRLKTDRLKYWLGVGAQPSDRVSWILGKFGVLPPPPPRVSLQKM-IPKKD 100          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6556.17381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6R3_9PHAE9.300e-14291.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KAU0_9STRA5.280e-2061.19Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U0J4Z2_9STRA7.720e-2061.54Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8BU89_THAPS9.300e-2075.51RT16, ribosomal protein 16 mitochondrial small rib... [more]
A0A7S1VML7_9STRA1.090e-1973.47Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1ZG56_TRICV1.090e-1961.54Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4NGP0_9STRA1.530e-1954.93Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9W8Z9_9STRA3.920e-1957.35Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1Z5K548_FISSO4.140e-1973.47Small subunit ribosomal protein S16 n=2 Tax=Fistul... [more]
A0A7S3PWJ7_9STRA5.670e-1956.92Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 1..34
e-value: 1.7E-8
score: 34.4
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..67
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..82
e-value: 2.1E-18
score: 68.2
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 1..66
NoneNo IPR availablePANTHERPTHR12919:SF2037S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6556contigEcto-sp13_S_contig6556:481..1686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6556.17381.1mRNA_Ecto-sp13_S_contig6556.17381.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6556 481..2390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6556.17381.1 ID=prot_Ecto-sp13_S_contig6556.17381.1|Name=mRNA_Ecto-sp13_S_contig6556.17381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
VGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPK
VVPVARTKQTVPRKEWKELQKKQAGGKGFHTSAACFSALQPGTGEPASDP
LPRTLFSASDDGELTDGIATRRPSSGASQYPSLETRPLSFWWGTGTERET
HRNGEAFSTTAIGPDELGSGIALDLSRMSLTGRSAGEQQARSPLRAVLAS
HLSLLGPAACSVIGLRVDAEEEARDTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf