prot_Ecto-sp13_S_contig6553.17377.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6553.17377.1
Unique Nameprot_Ecto-sp13_S_contig6553.17377.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
BLAST of mRNA_Ecto-sp13_S_contig6553.17377.1 vs. uniprot
Match: D7G0H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H7_ECTSI)

HSP 1 Score: 721 bits (1860), Expect = 2.360e-258
Identity = 375/386 (97.15%), Postives = 378/386 (97.93%), Query Frame = 0
Query:    1 MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGTGGAPGGRRITLGRNVPLGGGAXXXXXYGTYQPLRPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAEAEYDESPQWLVFSPFWVGDGLGLLVLVRVMAKVTNIRFVTPARNRGARRGVPRSRSTGSLNDLSGPGSNSGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSSDDADGASGGLQSYPWLECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHR 386
            MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGTGGAPGGRR TLGRNVPLGGGAXXXXXYGTYQPLRPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAE EYDESPQWLVFSPFWVGDGL LLVLVRVMAKVTNIRFVTPAR+RGARRG  RSRSTGSLNDLSG GSN+GGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLV+AAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANS DDADGASGGLQSYPWLECLAPLW VDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHR
Sbjct:    1 MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGTGGAPGGRRRTLGRNVPLGGGAXXXXXYGTYQPLRPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPARSRGARRGDARSRSTGSLNDLSGHGSNAGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVVAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWLECLAPLWVVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHR 386          
BLAST of mRNA_Ecto-sp13_S_contig6553.17377.1 vs. uniprot
Match: A0A6H5L389_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L389_9PHAE)

HSP 1 Score: 699 bits (1803), Expect = 8.250e-251
Identity = 367/386 (95.08%), Postives = 372/386 (96.37%), Query Frame = 0
Query:    1 MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGTGGAPGGRRITLGRNVPLGGGAXXXXXYGTYQPLRPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAEAEYDESPQWLVFSPFWVGDGLGLLVLVRVMAKVTNIRFVTPARNRGARRGVPRSRSTGSLNDLSGPGSNSGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSSDDADGASGGLQSYPWLECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHR 386
            MALPKSRSNTRISVLTGT KKSPAKVGGGSS NESTRLYHLASAGTGGAPGGRR TLG+NVPLGGGAXXXXX GTYQPL+PLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHR TAE EYDESPQWLVFSPFWVGDGL LLVLVRVMAKVTNIRFVTP R+RGARRGV RSRSTGSLNDLSGPGS++GGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRT GWLSGLTWLLLFSLTILVALRSGANS DDADGASGGLQSYPW ECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCF LLLAAL GSTVAEMLLTGDHR
Sbjct:    1 MALPKSRSNTRISVLTGTHKKSPAKVGGGSS-NESTRLYHLASAGTGGAPGGRRRTLGQNVPLGGGAXXXXXXGTYQPLQPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRLTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPTRSRGARRGVARSRSTGSLNDLSGPGSSAGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTCGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWRECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFTLLLAALVGSTVAEMLLTGDHR 385          
BLAST of mRNA_Ecto-sp13_S_contig6553.17377.1 vs. uniprot
Match: A0A397CGU1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CGU1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.370e-6
Identity = 60/246 (24.39%), Postives = 103/246 (41.87%), Query Frame = 0
Query:  136 WLVFSPFWVGDGLGLLVLVRVMAKVTNIRFVTPARNRGARRGVPRSRSTGSLNDLSGPGSNSGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSSDDADGASGGLQSYPWLECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLL 381
            W+VF PFWV +      LV + A V +IR  T  R                  D+              ++  P+     PLL++++     +  +  +    +V  C      +D        V  AP++++E  +++R +L ++   L G++W+LLF+ T+L+A     NS   A   S      PW+   APL+ + L+  G    V     AG + +  TQ    AL   AL  +T  +++L
Sbjct:   86 WVVFLPFWVAN------LVMLGAHVLSIRAATELRQWAE-------------TDM--------------MSNEPL----LPLLRKILLLYAVSMPLCFLLFWAEVAFCAILSDSSDISVY----VAYAPIMIIEVGYVVRYLLCKSRTTLPGVSWILLFTFTLLLA----HNSDIAAKSTSANSAGLPWVAVFAPLFVLQLVLFGSLAVVLYMQAAGLYRLNSTQVRATALYSIALVAATTGQIML 286          
BLAST of mRNA_Ecto-sp13_S_contig6553.17377.1 vs. uniprot
Match: W4GMW0_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMW0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.900e-6
Identity = 61/246 (24.80%), Postives = 103/246 (41.87%), Query Frame = 0
Query:  136 WLVFSPFWVGDGLGLLVLVRVMAKVTNIRFVTPARNRGARRGVPRSRSTGSLNDLSGPGSNSGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSSDDADGASGGLQSYPWLECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLL 381
            W+VF PFWV +      LV + A V +IR  T  R                  D+              ++  P+     PLL++++     +  +  +    +V  C      +D        V  APL+++E  +++R +L ++   L G++W+LLF+ T+L+A     NS   A   S      PW+   APL+ + L+  G    V     AG + +  TQ    AL   AL  +T  +++L
Sbjct:  114 WVVFLPFWVAN------LVMLGAHVLSIRAATELRQWAE-------------TDM--------------MSNEPL----LPLLRKILLLYAVSMPLCFLLFWAEVAFCAILSDSSDISVY----VAYAPLMIIEVGYVVRYLLCKSRTTLPGVSWILLFTFTLLLA----HNSDIAAKPTSANSAGLPWVAVFAPLFVLQLVLFGSLAVVLYMQAAGLYRLNSTQVRATALYSIALVAATTGQIML 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6553.17377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0H7_ECTSI2.360e-25897.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L389_9PHAE8.250e-25195.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A397CGU1_9STRA5.370e-624.39Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4GMW0_9STRA7.900e-624.80Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 359..381
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..347
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 348..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..302
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 382..386
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..91
NoneNo IPR availableTMHMMTMhelixcoord: 326..348
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 284..306
NoneNo IPR availableTMHMMTMhelixcoord: 220..242
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6553contigEcto-sp13_S_contig6553:520..2089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6553.17377.1mRNA_Ecto-sp13_S_contig6553.17377.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6553 520..2089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6553.17377.1 ID=prot_Ecto-sp13_S_contig6553.17377.1|Name=mRNA_Ecto-sp13_S_contig6553.17377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGTGGAP
GGRRITLGRNVPLGGGAGGGGGYGTYQPLRPLSNPVEDCLRAGAAGLGWC
LLSWFTGVVLLVLEYAKRWGAHRGTAEAEYDESPQWLVFSPFWVGDGLGL
LVLVRVMAKVTNIRFVTPARNRGARRGVPRSRSTGSLNDLSGPGSNSGGG
GGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREA
DAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILV
ALRSGANSSDDADGASGGLQSYPWLECLAPLWAVDLLYAGVAGYVAANTM
AGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHR
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