mRNA_Ecto-sp13_S_contig6552.17376.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A6H5KJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR7_9PHAE) HSP 1 Score: 1315 bits (3404), Expect = 0.000e+0 Identity = 865/1085 (79.72%), Postives = 886/1085 (81.66%), Query Frame = 1
Query: 364 AEWMPPPEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQGSLSSQGIAPLPSISTLEATRHARLPLPRMGGFQSGFDVGADGVVVGGGSDKLPSASSAAAPAVSSPFAVAATASPSSVFSNTFQAPPPTAVGPGSEVSMGNNNAVWGTAADEPRAESGQQRPLPAHEAVASAPATPASEDDDFGEFAGCQEEPQQHPTPXXXXXXXXXXXXXXXAPGDAPATAVASPASLAVERGASLGTTNAPRTAEPSASGAXXXXXXXXXXXXXXXXXXXSVGSTVDSGKGAGGGIRGGNLDNLIKTNVQEAGAGPVHLSDMMTTPPLAEKAHNPIMVDRASSSRTKLSVFDEMADLDLAVGQEDWNDFADETTAPPRSPTPSXXXXXXXXXXXXXXXVVKAAGVEEPTIDDAVSNSDADIRGETRPLDQDPGVGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQAWPGFEQQGMPSVSSEGAVAASAHASIADGAAPAAAAEGTQGQDDEWGDFADATAGXXXXXXXQHLPGPEGEATAVREDNAATNDAXXXXXXXXXXXX--EWGTFADAPEAAAGEEAGLAIGDASSTGGSPEAPPEEAADPFADIAPATPXXXXXRTPTVGATLEEEKVGRLGNEEGDGSGSPPSGAAATTTVTAPGLPLSLRGLRDALAKRGRLEEAVEVQRRMELLSSPPRTIDVPYSPEDVTADDANAXXXXXXXXXXXXLERWRAAAAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEEALXXXXXXXALGVAVKRQRSARRAVCLLSMLDAAGTAGDGAAGKDLENGRDGGLTSGGGGDKEEGDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAGRGIEALAGGGAGSRSGSDRAAATPASPTRPSSPFSRPTTEREGANSRAEIDSAGVPPDADALASDGGAVRREVARSQEFESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXETAAATFPPFSGSKTARREFVWEREPKGRGG 3612
AEWMPPPEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKT GSLSSQG APLPSIS LEATRHARLPLPRMGGF SGF VGADG+V GGGSD+LPSASSAAAPAV SPFAVAA ASPSSVFSNTFQAPPPTAVGPGSEVSMG NAVWGTAADEPR ESGQQRPLPAHEAVASAPAT ASEDDDFGEFAGCQEEPQ HPT XXXXXXXXXXXXXXXAPGDAPATAVASP LA ERG ASGA XXXX K AG GI GGNLD+LIKTNVQEAGAGPVHLSDMMTTPPLAEKAHNP+MVDRASSSRTKLSVFDEMADLDLAVGQEDWNDFADETTAPPRSPTPSXXXXXXXXXX VVKAA VEEP IDDA+ NSDADIRGE RPLDQDPGVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXP AWPG EQQGMP SSEGAVAASAHASIADGAAPAAAAEG QGQDDEWGDF DATA QHL GPEGEATAVREDNAAT XXXXXXXXXXX EWGTFADAPEAAAGEEAGLAIGDASSTGGS EAPPEEA DPFADI P TPXXXXX GAT E+E+ GRLG+EE G TTVTAPGLPLSLRGLRDALAK+GRLEEAVEVQRRMEL SSPPRTIDVPYSPEDVTA+DANA LERWR AAA DLRPFPTVE+LAATMSAADAARGEKFRERFVRGRPPVEEEA XXXXXXXAL VAVKRQRSARRAVCLLSMLDAAGTAGDGAA KD+E+GRD GLTSGG +KEE DKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAG+GIEALAGGG SDRAAATPAS TRPSSPFSRPTTEREGA+ RAEIDSAG+PPDA ALASDGGAVRREVARSQEFESFCRGLREA+KVCRMLQASAED CCLQGVDGFAAMERAWAELRRSAREAXXXXXXXX P G + E+E +G GG
Sbjct: 47 AEWMPPPEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKT------------------------------GSLSSQGTAPLPSISALEATRHARLPLPRMGGFPSGFGVGADGIVGGGGSDRLPSASSAAAPAVLSPFAVAAVASPSSVFSNTFQAPPPTAVGPGSEVSMGTINAVWGTAADEPRTESGQQRPLPAHEAVASAPATSASEDDDFGEFAGCQEEPQ-HPTXXXXXXXXXXXXXXXXAPGDAPATAVASPGFLAAERGXXXXXXXXXXXXXXFASGAAAAGGDAWMMGGGRGXXXXXXXXXXXXXKXAGXGIGGGNLDDLIKTNVQEAGAGPVHLSDMMTTPPLAEKAHNPVMVDRASSSRTKLSVFDEMADLDLAVGQEDWNDFADETTAPPRSPTPSXXXXXXXXXXATEE-VVKAAVVEEPAIDDAICNSDADIRGEPRPLDQDPGVGX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXPHAWPGLEQQGMPLFSSEGAVAASAHASIADGAAPAAAAEGAQGQDDEWGDFLDATAEGEGTTGQQHLAGPEGEATAVREDNAATXXXXXXXXXXXXXXGDEEWGTFADAPEAAAGEEAGLAIGDASSTGGSREAPPEEAVDPFADIEPTTPXXXXXXXXXXGATAEDEEAGRLGSEEXXGXXXXXXXXXXXTTVTAPGLPLSLRGLRDALAKQGRLEEAVEVQRRMELPSSPPRTIDVPYSPEDVTAEDANAHADGGGEAEDADLERWRGAAAGDLRPFPTVEDLAATMSAADAARGEKFRERFVRGRPPVEEEAXXXXXXXXALDVAVKRQRSARRAVCLLSMLDAAGTAGDGAADKDVEDGRDRGLTSGGAVEKEEEDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAGKGIEALAGGGXXXXXXSDRAAATPASLTRPSSPFSRPTTEREGADCRAEIDSAGLPPDAAALASDGGAVRREVARSQEFESFCRGLREAIKVCRMLQASAEDACCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXXXXXXDLPSVFGVEDGEEGVCMEKEAQGVGG 1096
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: D8LT09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT09_ECTSI) HSP 1 Score: 670 bits (1729), Expect = 2.010e-222 Identity = 435/535 (81.31%), Postives = 441/535 (82.43%), Query Frame = 1
Query: 1903 MPSVSSEGAVAASAHASIADGAAPAAAA-EGTQGQDDEWGDFADATAGXXXXXXXQHLPGPEGEATAVREDNAATNDAXXXXXXXXXXXXEWGTFADAPEAAAGEEAGLAIGDASSTGGSPEAPPEEAADPFADIAPATPXXXXXRTPTVGATLEEEKVGRLGNEEGDGSGSPPSGAAATTTVTAPGLPLSLRGLRDALAKRGRLEEAVEVQRRMELLSSPP-RTIDVPYSPEDVTADD-ANAXXXXXXXXXXXX-LERWRAAAAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEEALXXXXXXXALGVAVKRQRSARRAVCLLSMLDAAGTAGDGAAGKDLENGRDGGLTSGGGGDKEEGDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAGRGIEALAGGGAGSRSGSDRAAATPASPTRPSSPFSRPTTEREGANSRAEIDSAGVPPDADALASDGGAVRREVARSQEFESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREA 3495
MP VSSEGAVAASAHASIADGAAPAAAA EG QGQDDEWGDF DATA XXXXXXX A NDA EWGTFADAPEAAAGEEAG AIG ASSTGGSPEAPPEEA DPFADIAPATPXXXXX TTVTAPGLPLSLRGLRDALAKRGRLEEAVEVQRRMEL S+PP R IDVPYSPEDVTADD AN XXXXXXXXXX LERWRA AAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEE XXXXXXX LGVAV+RQRSARRAVCLLSMLDAAGTAGDGAA KDLE+GRDGGLTSGGG +KEE DKLELDLGLDTRRARSPPSLADWAAMMSYVTSMA RGIEALAGGGAGSRSGSDRAAATPASPTRPSSPF+RPT EREGA+ RAEIDSAGVPPDADALASDG AVRREVARSQE ESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREA
Sbjct: 1 MPPVSSEGAVAASAHASIADGAAPAAAAAEGAQGQDDEWGDFEDATAXXXXXXXXXXXXXXXXXXXXXXXXXXA-NDALDDDDEE-----EWGTFADAPEAAAGEEAGFAIGGASSTGGSPEAPPEEAVDPFADIAPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVTAPGLPLSLRGLRDALAKRGRLEEAVEVQRRMELPSTPPPRAIDVPYSPEDVTADDDANXXXXXXXXXXXDADLERWRAVAAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEEXXXXXXXXXXLGVAVRRQRSARRAVCLLSMLDAAGTAGDGAADKDLEDGRDGGLTSGGGDEKEEQDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAARGIEALAGGGAGSRSGSDRAAATPASPTRPSSPFTRPTAEREGADCRAEIDSAGVPPDADALASDGVAVRREVARSQELESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREA 529
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A835YWY3_9STRA (EH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.340e-20 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 370 WMPPPEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQ 603
W PPP Q YD L+ A+A + PG VSG+ AV FFS SGL + +LK IWSLCDP LTG++ PGF A+RLIALAQ
Sbjct: 1 WQPPPVQAAIYDHLYSIAAANSSTPGLVSGKAAVDFFSLSGLPRPLLKHIWSLCDPQLTGALDMPGFHGALRLIALAQ 78
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: T0Q7D4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q7D4_SAPDV) HSP 1 Score: 69.3 bits (168), Expect = 4.670e-8 Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 370 WMPP-PEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQG 609
W PP P + YD LF A A GT+ GR AV FFS+SGL K VL+ IW++ D T + F+ AMRLIA+AQQG
Sbjct: 21 WTPPSPLEKAYYDTLFVLADEEKA--GTLGGRSAVSFFSKSGLDKTVLREIWTIADARQTSQLLIGDFYVAMRLIAMAQQG 99
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A1W0A8M5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8M5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.580e-8 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 370 WMPP-PEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQGSLSS----QGIAPLP-SISTLEATRHARLPLPRMGG 702
W PP P + YDALF A G++ GR AV FFS+SGL K +L+ IW++ D + F+ AMRLIA+AQQG + Q +A P +++ L+ +P P M G
Sbjct: 3 WTPPSPLEKSYYDALFTLADEERT--GSIGGRNAVLFFSKSGLDKTILREIWTIADARQASQLGVEDFYIAMRLIAMAQQGQPVTIQRFQELAQSPFTVAILQGVPPPAMPAPPMSG 117
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A024UHA3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHA3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.980e-7 Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 370 WMPP-PEQVPEYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQG 609
W PP P++ YD LF+ A G++ GR AV FF++SGL K +L+ +W++ D T ++ F+ AMRLIA+AQ G
Sbjct: 56 WTPPSPQEKQYYDMLFQVADDEHT--GSIGGRSAVMFFTKSGLDKSILREVWTIADSRQTSFLQLNDFYVAMRLIAMAQHG 134
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A0D2N1I2_9CHLO (EH domain-containing protein 4 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N1I2_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 3.950e-6 Identity = 33/70 (47.14%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 400 YDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQG 609
YD F++A G V+G AV+FF RSGLSKDVL +W + + S G + R F AM LI++AQQG
Sbjct: 22 YDRWFKAADTDS--DGRVTGADAVEFFQRSGLSKDVLARVWDMANTSRAGYLDRAAFHKAMDLISIAQQG 89
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A2V0PEN8_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PEN8_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 4.100e-6 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 400 YDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQG 609
YD F+ A A + G ++G AVQFF RSGLS+DVL +W L + S G + R F AM LI++AQQG
Sbjct: 10 YDRWFKIADAD--MDGRLTGADAVQFFQRSGLSRDVLARVWDLANSSRAGFLDRLAFHKAMDLISIAQQG 77
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: UPI00192476DA (LOW QUALITY PROTEIN: epidermal growth factor receptor substrate 15-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192476DA) HSP 1 Score: 63.2 bits (152), Expect = 4.310e-6 Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 397 EYDALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQGSLSSQGIAPLPSISTLEATRHARLPLPRM 696
+++A FR A G +SG AV FF SGLSK VL IW+ D S +GS+ +P FF A++L+ +AQ+ LS + + L A++P P++
Sbjct: 8 QFEAYFRKADLDG--DGRISGAEAVAFFQGSGLSKQVLAQIWTYADQSHSGSLSKPEFFNALKLVTVAQRRELSPDIVK-----AALYGPAAAKIPAPQI 100
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Match: A0A8K1FHS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHS2_PYTOL) HSP 1 Score: 63.2 bits (152), Expect = 4.580e-6 Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 370 WMPPPEQVPEY-DALFRSASAGCAVPGTVSGRIAVQFFSRSGLSKDVLKTIWSLCDPSLTGSIRRPGFFAAMRLIALAQQG 609
W PP Q +Y D LF A + GRIAV FFSRS + K++L+ IWS+ D + R F AMRLI++AQ+G
Sbjct: 595 WTPPSPQEQQYFDLLFSMADE--EKRNAIGGRIAVAFFSRSNVDKNILREIWSIADSHQKSELSRNEFHVAMRLISMAQRG 673 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6552.17376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6552.17376.1 >prot_Ecto-sp13_S_contig6552.17376.1 ID=prot_Ecto-sp13_S_contig6552.17376.1|Name=mRNA_Ecto-sp13_S_contig6552.17376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1218bp MMMPMAAASTAAPWGSGGGGLNAASGLFRPAASGQNPNLPAGGVATSVLPback to top mRNA from alignment at Ecto-sp13_S_contig6552:2480..8065+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6552.17376.1 ID=mRNA_Ecto-sp13_S_contig6552.17376.1|Name=mRNA_Ecto-sp13_S_contig6552.17376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5586bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6552:2480..8065+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6552:2480..8065+ >mRNA_Ecto-sp13_S_contig6552.17376.1 ID=mRNA_Ecto-sp13_S_contig6552.17376.1|Name=mRNA_Ecto-sp13_S_contig6552.17376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6552:2480..8065+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |