prot_Ecto-sp13_S_contig6551.17375.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6551.17375.1
Unique Nameprot_Ecto-sp13_S_contig6551.17375.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6551.17375.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.650e-40
Identity = 82/92 (89.13%), Postives = 85/92 (92.39%), Query Frame = 0 
Query:    1 RYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAGASVPTGAPQSPPRNSNPPPAAAAEAEPRSAIVDRNNTGSRSVQIEGDDAEPEKG 92
            RYHGPNSQFQGENAVMLGSHSTSH MVALPVNSA PAGASVPTGAP  PPR+S PPPAAAAEAEPRSAIVDRN  GSR+V+IEGDDAEPEKG
Sbjct: 4185 RYHGPNSQFQGENAVMLGSHSTSHGMVALPVNSAHPAGASVPTGAPHPPPRDSTPPPAAAAEAEPRSAIVDRNYMGSRTVRIEGDDAEPEKG 4276
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BLAST of mRNA_Ecto-sp13_S_contig6551.17375.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.870e-39
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0 
Query:    1 RYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAGASVPTGAPQSPPRNSNPPPAAAAEAEPRSAIVDRNNTGSRSV 80
            RYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAGASVPTGAPQSPPRNSNPPPAAAAEAEPRSAIVDRNN GSRSV
Sbjct: 4001 RYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAGASVPTGAPQSPPRNSNPPPAAAAEAEPRSAIVDRNNAGSRSV 4080
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6551.17375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE1.650e-4089.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX0_ECTSI6.870e-3998.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6551contigEcto-sp13_S_contig6551:5608..6191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6551.17375.1mRNA_Ecto-sp13_S_contig6551.17375.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6551 5608..6191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6551.17375.1 ID=prot_Ecto-sp13_S_contig6551.17375.1|Name=mRNA_Ecto-sp13_S_contig6551.17375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
RYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAGASVPTGAPQSPP
RNSNPPPAAAAEAEPRSAIVDRNNTGSRSVQIEGDDAEPEKG
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