prot_Ecto-sp13_S_contig65501.17371.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65501.17371.1
Unique Nameprot_Ecto-sp13_S_contig65501.17371.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length73
Homology
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BLAST of mRNA_Ecto-sp13_S_contig65501.17371.1 vs. uniprot
Match: A0A6H5KY18_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY18_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 7.670e-39
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0 
Query:    1 DFIEHHANLSFGIKRDEDFRELVINCWGLDGGGVGGGDACMPADVAYVLRRVNAPRRKFLVSYADGSQRVEEL 73
            DFIEHHANLSFGIKRDEDFRELVINCWGLDGGGVGGGDACMP DVA VL RVNAPRRKFLVSY DGSQRVEEL
Sbjct: 1306 DFIEHHANLSFGIKRDEDFRELVINCWGLDGGGVGGGDACMPVDVADVLSRVNAPRRKFLVSYEDGSQRVEEL 1378
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BLAST of mRNA_Ecto-sp13_S_contig65501.17371.1 vs. uniprot
Match: D8LQ60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ60_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.630e-38
Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 0 
Query:    1 DFIEHHANLSFGIKRDEDFRELVINCWGLDGGGVGGGDACMPADVAYVLRRVNAPRRKFLVSYADGSQRVEEL 73
            DFIEHHANLSFGIKRDEDFRELVINCWGLDGG VG GD CMPADVA +LRRVNAPRRKFLVSYADGSQRVEEL
Sbjct: 1302 DFIEHHANLSFGIKRDEDFRELVINCWGLDGGAVGDGDVCMPADVADMLRRVNAPRRKFLVSYADGSQRVEEL 1374
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65501.17371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY18_9PHAE7.670e-3994.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LQ60_ECTSI3.630e-3893.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65501contigEcto-sp13_S_contig65501:7..225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65501.17371.1mRNA_Ecto-sp13_S_contig65501.17371.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65501 7..225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65501.17371.1 ID=prot_Ecto-sp13_S_contig65501.17371.1|Name=mRNA_Ecto-sp13_S_contig65501.17371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp
DFIEHHANLSFGIKRDEDFRELVINCWGLDGGGVGGGDACMPADVAYVLR
RVNAPRRKFLVSYADGSQRVEEL
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