prot_Ecto-sp13_S_contig6547.17364.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6547.17364.1
Unique Nameprot_Ecto-sp13_S_contig6547.17364.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length192
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6547.17364.1 vs. uniprot
Match: A0A6H5JHK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK5_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.430e-80
Identity = 144/188 (76.60%), Postives = 154/188 (81.91%), Query Frame = 0 
Query:    1 SVSRRAHEQPPTIKAGSSLGVRTKDDDPRSGKGGADTANAPPSNXXXXXXXXXXXT-AISPGTRPTRDNNNRKPPRSPGGVPPEGREKGPLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFAAGAGAGGAIGRRGDKQRLGLAKGTKHGPATAGSGIIGGFPAVRHRSEMGLVKLGAGAS 187
            S SRRAH+QPPT+KAGSSLGVR +DDDPRSG+GGAD ANAPPSN             AIS G +PT  +N+R+PP S GG+ PE  EK PLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFA GAGAGG I  RGDKQRLGLAKG KHG A AGSGIIGGFPA RHRSEMGLVKLGAGA+
Sbjct:   29 SASRRAHKQPPTVKAGSSLGVRKEDDDPRSGRGGADHANAPPSNGGDAAAVAVAAAPAISSGAQPTCGSNDREPPHSLGGMAPEESEKSPLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFAGGAGAGGVIVTRGDKQRLGLAKGAKHGMAAAGSGIIGGFPAARHRSEMGLVKLGAGAA 216
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6547.17364.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 2.430e-79
Identity = 156/184 (84.78%), Postives = 162/184 (88.04%), Query Frame = 0 
Query:    9 QPPTIKAGSSLGVRTKDDDPRSGKGGADTANAPPSNXXXXXXXXXXX--TAISPGTRPTRDNNNRKPPRSPGGVPPEGREKGPLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFAAGAGAGGAIGRRGDKQRLGLAKGTKHGPATAGSGIIGGFPAVRHRSEMGLVKLGAGASAAS 190
            +PPTIKAGSSLGVR +DDDPRSG+GGADTANAP S   XXXXXX     TAISPGT+PTRDNNNR+PPRS G VPPE REKGPLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFA GAGAGGAIGRRGDKQR GLAKG KH  A A  GIIGGFPAVRHRSEMGLVKLG GA+AAS
Sbjct:   43 KPPTIKAGSSLGVRKEDDDPRSGRGGADTANAPRSTGGXXXXXXAVAAATAISPGTQPTRDNNNREPPRSLG-VPPEEREKGPLTSASSPTGGMILNAPGVVSKSVREREVKPPAPMRIGGFAGGAGAGGAIGRRGDKQRFGLAKGAKHVTAVAERGIIGGFPAVRHRSEMGLVKLGVGAAAAS 225
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6547.17364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHK5_9PHAE1.430e-8076.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHI7_ECTSI2.430e-7984.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6547contigEcto-sp13_S_contig6547:6748..7323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6547.17364.1mRNA_Ecto-sp13_S_contig6547.17364.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6547 6748..7324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6547.17364.1 ID=prot_Ecto-sp13_S_contig6547.17364.1|Name=mRNA_Ecto-sp13_S_contig6547.17364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
SVSRRAHEQPPTIKAGSSLGVRTKDDDPRSGKGGADTANAPPSNGGDSAA
AVAAATAISPGTRPTRDNNNRKPPRSPGGVPPEGREKGPLTSASSPTGGM
ILNAPGVVSKSVREREVKPPAPMRIGGFAAGAGAGGAIGRRGDKQRLGLA
KGTKHGPATAGSGIIGGFPAVRHRSEMGLVKLGAGASAASTG
back to top