mRNA_Ecto-sp13_S_contig6533.17345.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6533.17345.1
Unique NamemRNA_Ecto-sp13_S_contig6533.17345.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A6H5K6E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E8_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 2.660e-73
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 1 
Query:   10 ASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 327
            ASSPEEHLVT LPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDP SDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSG+GIDVNPYSWHNVANVLYVDQPVG
Sbjct:   52 ASSPEEHLVTTLPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPLSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGDGIDVNPYSWHNVANVLYVDQPVG 157
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: D8LQG6_ECTSI (Carboxypeptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG6_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.600e-71
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 1 
Query:    1 STPASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 327
            S  ASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG
Sbjct:   51 SAAASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 159
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A835YJ65_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ65_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.310e-40
Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = 1 
Query:   10 ASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHD-SGEGIDVNPYSWHNVANVLYVDQPVG 327
            A+   +HLVT LPGL+D     KQYAG+IPV  G  FYWLFESA+  P+ DPLVIWLNGGPGCSSMDGL+LENGP +L     + +  N YSWHNVANVLYVDQPVG
Sbjct:   61 ATKASDHLVTKLPGLQDGALTAKQYAGYIPVNGGKLFYWLFESANK-PALDPLVIWLNGGPGCSSMDGLFLENGPLQLTGPKKKDLTGNMYSWHNVANVLYVDQPVG 166
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: W7U5F9_9STRA (Pheromone processing carboxypeptidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5F9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.610e-37
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 1 
Query:   10 ASSPEEHLVTALPGLKDKDFPTKQYAGHIPV---VDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 327
            A+SP+EHLV  LPGL D  FPT+Q+AG + V   ++G +FYW  E+AS D ++ PL+IWLNGGPGCSSMDG +LE+GPF++ D    + V+PYSWH+VANV+YVDQPVG
Sbjct:   58 ATSPDEHLVKQLPGLADDAFPTRQWAGLLTVDEAIEGKYFYWFVEAAS-DAANKPLLIWLNGGPGCSSMDGFFLEHGPFKVLDD-MSLSVHPYSWHHVANVVYVDQPVG 164
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A482SB72_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB72_9ARCH)

HSP 1 Score: 132 bits (332), Expect = 8.900e-37
Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 1 
Query:   13 SSPEEHLVTALPGLKDKDFPTKQYAGHIPV---VDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDV--NPYSWHNVANVLYVDQPVG 327
            S+ E H VT+LPGL D      QYAGHI V    +G  FYWLFES ++  +S PLVIWLNGGPGCSSMDGL+LE GPF+L   G  I V  NP+SWH V+N+L+VDQPVG
Sbjct:   48 STDENHKVTSLPGLTDAS-DLNQYAGHILVDEKYNGHFFYWLFESPTNS-ASKPLVIWLNGGPGCSSMDGLFLEIGPFKLSKEGASITVIPNPHSWHTVSNLLFVDQPVG 155
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A8J9S6D4_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S6D4_PHATR)

HSP 1 Score: 127 bits (319), Expect = 9.660e-35
Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 1 
Query:   16 SPEEHLVTALPGLKDKDFPTKQYAGHIPVV---DGFHFYWLFESASS-DPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLH---DSGEGIDVNPYSWH-NVANVLYVDQPVG 327
            SP+ HLVT LP L  ++FPTK +AGH+P     D + FYWLFE   + D  + PL+IWLNGGPGCSSMDGL+LENGPFRL    D    I    +SWH + A  LY+DQPVG
Sbjct:    4 SPDAHLVTDLPLLSPEEFPTKHWAGHLPASPNNDKYFFYWLFEPEGNYDKDTVPLIIWLNGGPGCSSMDGLFLENGPFRLEMDEDENYQIKAAEHSWHKSPAYTLYIDQPVG 115
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A7S2R7U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R7U2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.150e-34
Identity = 62/110 (56.36%), Postives = 72/110 (65.45%), Query Frame = 1 
Query:   22 EEHLVTALPGLKDKDFPTKQYAGHIPVV---DGFHFYWLFESASS----DPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNV-ANVLYVDQPVG 327
            E HLVT+LP L + D P  QYAGHI      D   FYWLF   +     + +  PL+IWLNGGP CSSMDGL+LENGPFR +D    I +NPYSWH   A VLY+DQPVG
Sbjct:    9 ESHLVTSLP-LLESDLPNPQYAGHIAASKDDDKKLFYWLFYPENKGEILNDNDIPLLIWLNGGPACSSMDGLFLENGPFRFNDDNTKIQLNPYSWHKAPAYVLYIDQPVG 117
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A7S1ZM36_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM36_TRICV)

HSP 1 Score: 128 bits (321), Expect = 2.140e-33
Identity = 67/119 (56.30%), Postives = 81/119 (68.07%), Query Frame = 1 
Query:    7 PASSPEEHLVTALPGLKDKDFPTKQYAGHIPVV----DGFHFYWLFESASS---DPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLH--DSGEG--IDVNPYSWH-NVANVLYVDQPVG 327
            P  +P++HLV +LP L   DF T+ YAGHIP      D   FYWLFE +     D  + PL+IWLNGGPGCSSMDGL+LE+GPFRL   D G+G  + +NP SWH + A VLYVDQPVG
Sbjct:    5 PLPTPDDHLVRSLPLLNPDDFRTRHYAGHIPASTDPDDKKLFYWLFEPSGGTEEDRKNAPLLIWLNGGPGCSSMDGLFLEHGPFRLRPTDDGKGWKMGINPQSWHRSPAWVLYVDQPVG 123
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A6I9Q631_9TELE (lysosomal protective protein-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9Q631_9TELE)

HSP 1 Score: 120 bits (302), Expect = 6.510e-33
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:   13 SSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHF-YWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 327
            ++P    V  LPGL+ K    + ++G++ V DG H  YWL ES   DPSSDPLV+WLNGGPGCSS+DGL  E+GP+ + D G  +  NPYSW+ +ANVLY++ P G
Sbjct:   17 AAPAADEVKFLPGLQ-KQPSFRHFSGYLKVADGKHLHYWLVES-QKDPSSDPLVLWLNGGPGCSSLDGLLTEHGPYLIQDDGATLQYNPYSWNKIANVLYLESPAG 120
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BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Match: A0A0S7HGC3_9TELE (Carboxypeptidase (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HGC3_9TELE)

HSP 1 Score: 123 bits (308), Expect = 1.030e-32
Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 1 
Query:   13 SSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSDPSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVANVLYVDQPVG 327
            ++P    ++ LPGL  K    +QY+G++ V DG H ++ F  + S PS+DP+V+WLNGGPGCSS+DGL  E+GPF + D G  +  NPYSW+ +AN+LY++ PVG
Sbjct:   17 AAPSADEISFLPGLS-KQPSFRQYSGYLTVADGKHLHYWFVESQSKPSTDPVVLWLNGGPGCSSLDGLLTEHGPFLIQDDGATLQYNPYSWNKIANMLYLESPVG 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6533.17345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6E8_9PHAE2.660e-7397.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQG6_ECTSI1.600e-7198.17Carboxypeptidase (Partial) (Fragment) n=1 Tax=Ecto... [more]
A0A835YJ65_9STRA9.310e-4066.36Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
W7U5F9_9STRA1.610e-3760.55Pheromone processing carboxypeptidase n=2 Tax=Mono... [more]
A0A482SB72_9ARCH8.900e-3760.91Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A8J9S6D4_PHATR9.660e-3556.25Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2R7U2_9STRA5.150e-3456.36Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1ZM36_TRICV2.140e-3356.30Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A6I9Q631_9TELE6.510e-3351.89lysosomal protective protein-like n=1 Tax=Notothen... [more]
A0A0S7HGC3_9TELE1.030e-3248.57Carboxypeptidase (Fragment) n=1 Tax=Poeciliopsis p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6533contigEcto-sp13_S_contig6533:6981..8167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score237.3
Seed ortholog evalue3.4e-60
Seed eggNOG ortholog2880.D8LQG6
Preferred nameKEX1
Model size327
KEGG koko:K01288,ko:K09645
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000322,GO:0000323,GO:0000324,GO:0000746,GO:0000747,GO:0001906,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005794,GO:0005802,GO:0006508,GO:0006518,GO:0006807,GO:0006915,GO:0007039,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008236,GO:0008238,GO:0008277,GO:0009056,GO:0009057,GO:0009058,GO:0009405,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010515,GO:0010646,GO:0010648,GO:0010720,GO:0010969,GO:0012501,GO:0012505,GO:0016485,GO:0016787,GO:0017171,GO:0019538,GO:0019748,GO:0019835,GO:0019953,GO:0022414,GO:0023051,GO:0023057,GO:0030163,GO:0030447,GO:0030448,GO:0031135,GO:0031137,GO:0031138,GO:0031640,GO:0031984,GO:0034305,GO:0034641,GO:0035821,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043900,GO:0043901,GO:0043937,GO:0043938,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044364,GO:0044419,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0044764,GO:0045595,GO:0045597,GO:0045744,GO:0046937,GO:0046938,GO:0046999,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051603,GO:0051604,GO:0051704,GO:0051715,GO:0060238,GO:0060240,GO:0060284,GO:0065007,GO:0070008,GO:0070011,GO:0071704,GO:0075306,GO:0075307,GO:0090029,GO:0098791,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1903664,GO:1903666,GO:2000241,GO:2000242
Exons3
EggNOG free text desc.PFAM Peptidase S10, serine carboxypeptidase
EggNOG OGsCOG2939@1,KOG1282@2759
EC3.4.16.6
Cds size327
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463901.2017558-CDS-Ecto-sp13_S_contig6533:6980..71721681463901.2017558-CDS-Ecto-sp13_S_contig6533:6980..7172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6533 6981..7172 +
1681463901.2143428-CDS-Ecto-sp13_S_contig6533:7455..75441681463901.2143428-CDS-Ecto-sp13_S_contig6533:7455..7544Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6533 7456..7544 +
1681463901.2224066-CDS-Ecto-sp13_S_contig6533:8121..81671681463901.2224066-CDS-Ecto-sp13_S_contig6533:8121..8167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6533 8122..8167 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6533.17345.1prot_Ecto-sp13_S_contig6533.17345.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6533 6981..8167 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6533.17345.1

>prot_Ecto-sp13_S_contig6533.17345.1 ID=prot_Ecto-sp13_S_contig6533.17345.1|Name=mRNA_Ecto-sp13_S_contig6533.17345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
STPASSPEEHLVTALPGLKDKDFPTKQYAGHIPVVDGFHFYWLFESASSD
PSSDPLVIWLNGGPGCSSMDGLWLENGPFRLHDSGEGIDVNPYSWHNVAN
VLYVDQPVG
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mRNA from alignment at Ecto-sp13_S_contig6533:6981..8167+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6533.17345.1 ID=mRNA_Ecto-sp13_S_contig6533.17345.1|Name=mRNA_Ecto-sp13_S_contig6533.17345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1187bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6533:6981..8167+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCACGCCCGCCTCGTCTCCCGAGGAGCACCTGGTCACCGCCCTGCCGGG
GCTAAAGGACAAGGACTTCCCAACCAAGCAGTATGCCGGCCACATCCCGG
TCGTGGACGGGTTCCACTTCTACTGGCTGTTCGAGAGCGCGAGCTCGGAC
CCTTCGTCCGACCCCCTCGTGATATGGCTGAACGGCGGGCCGGTGACAGG
AGGATGCGTTTTTGGCAGTCCCATCATTTCACGACGCTGTATTGCGAGCA
TGTACACCGTATTCGAACCGCTTTTATATCCAGCGTGTCCTCGGCTTTGT
AGTTTGCCCGCAAGACATATATTGCTTTCGGAGTACCCAGCGAGCCACCC
TGACATCGCAGTGCGTCTGTGGTTCAAGGTATTTCCACTTCCAGGCATGG
GGCTTCGCGTTGACTTTTCTCTTGTCTTTGCTGTTGCGTGTGACGATGTG
CTCGGGCTGATTCCCGGCGCGACAGGGCTGTTCAAGCATGGACGGGTTGT
GGCTTGAGAACGGTCCTTTTCGACTACATGACTCCGGGGAAGGCATCGAC
GTCAATCCCTATAGGTGAGTGGGTTTGCGTAGACAAGCAGGCGTTTCTTT
TGGAAGTCCCCGTGCAGCGGTACGTGTAGCTTGGTGGTCTACGACGTGGT
ACGGTAATTTGGCCTTCCGTAGGGACAGATGGTGCTTCAGAAAGGTTATC
TCGTCGCCGCTACTAACCGCCCACGTGCAATGCTTTTCGGAGGAGACTGG
CTGCGTCCCCTTCGACGGCAAACAGCATGCAACGGTTTTCTACAGTGCAG
ACCCTGCCCTCTTTCGTCGTGGTTTTTCGCGCTTGGACGTTCGGTGTTCG
ACGGATAAACTGTGCTGTATGGCACCGTACTTGCTCAATGTGCCGCATAA
GTAAATAGGGTGAAGACTGAGACCCTATTCTGAAACTACTAACCGTAAGT
ACGACGGGTACAGAGCGGGGCGCACCCACAGCGCGTCGTGCTTACCTGAA
AAAGGTGCGGTATGCCAAGGAACCCCCGTCAATTTGTCACGTTGAGATAG
ATGCACCTGATGAAAACAAGATAACAAGCAGTTGTTGTTTCTGACTGGAA
GGTTGGAAATGTGCCCGTCCCGTTCCGTCCGTCTCACACAGCTGGCACAA
CGTGGCAAACGTTTTGTATGTGGACCAGCCGGTCGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6533:6981..8167+

>mRNA_Ecto-sp13_S_contig6533.17345.1 ID=mRNA_Ecto-sp13_S_contig6533.17345.1|Name=mRNA_Ecto-sp13_S_contig6533.17345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6533:6981..8167+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCACGCCCGCCTCGTCTCCCGAGGAGCACCTGGTCACCGCCCTGCCGGG
GCTAAAGGACAAGGACTTCCCAACCAAGCAGTATGCCGGCCACATCCCGG
TCGTGGACGGGTTCCACTTCTACTGGCTGTTCGAGAGCGCGAGCTCGGAC
CCTTCGTCCGACCCCCTCGTGATATGGCTGAACGGCGGGCCGGGCTGTTC
AAGCATGGACGGGTTGTGGCTTGAGAACGGTCCTTTTCGACTACATGACT
CCGGGGAAGGCATCGACGTCAATCCCTATAGCTGGCACAACGTGGCAAAC
GTTTTGTATGTGGACCAGCCGGTCGGC
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