mRNA_Ecto-sp13_S_contig6519.17325.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6519.17325.1
Unique NamemRNA_Ecto-sp13_S_contig6519.17325.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A6H5JQH2_9PHAE (Metallophos domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQH2_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 2.440e-203
Identity = 289/308 (93.83%), Postives = 294/308 (95.45%), Query Frame = 2 
Query:  392 MTSARPRGPVPQLMFFLQLSASAAWLSPNAFHDERFKGSRWGKGVSNSRASPNSADSCRSTARRLFGGRGDTSTMALEPDNPTFVLTVLGDLHLDPADMGAHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            MTSARPRGPVP LMFFLQLSA+ AWLSPNAFH ER K  RWG GVSNSRASP+SA S RST RRLFGGRG T TMALEPDNPTFVLTVLGDLHLDPADM AHEEARDQIVHQMEAEAFLMETEN+HVVSLGDLGAYGSAGTTECFRVAR+YLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQM+WFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFL MCRKYGHIKAWFSGHFHL
Sbjct:    1 MTSARPRGPVPLLMFFLQLSATTAWLSPNAFHHERLKEFRWGTGVSNSRASPSSAVSSRSTTRRLFGGRGGTGTMALEPDNPTFVLTVLGDLHLDPADMRAHEEARDQIVHQMEAEAFLMETENMHVVSLGDLGAYGSAGTTECFRVAREYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMRWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLRMCRKYGHIKAWFSGHFHL 308
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: W7TNN9_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNN9_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.670e-83
Identity = 138/257 (53.70%), Postives = 171/257 (66.54%), Query Frame = 2 
Query:  563 CRSTARRLFGGR-GDTSTMALEPDNPT---FVLTVLGDLHLDPADMGAHEEARDQIVHQMEA--EAFLMETENLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            C S ++R    R G    +A +P       F L +LGDLHLDP DM  H E R  I+  M    ++        H++SLGDLGAYG AGTT CF  A+ YLDGF  P ++V+GNHDLEG+ EFATD ENL A++  F   +P F   I +KTLC+GLST RFR +  SSHEV+I + Q  W E  L  H  E+GW+V+VFSHAPPMG+G+RVVQ VHIKN CA+LNHS GD ERR F+ +C++Y  IKAWFSGHFHL
Sbjct:   30 CSSKSQRALRRREGSPKAVAFKPQKGLAHDFCLAILGDLHLDPTDMKLHNEGRKHIIDVMGGMKKSLSSSKSQAHLISLGDLGAYGEAGTTACFEHAKAYLDGFQLPYNLVTGNHDLEGMDEFATDVENLQAWKKVFGLNAPTFCHQIGDKTLCVGLSTTRFRSSPFSSHEVYIPKEQTIWLENLLKQHPEEEGWRVLVFSHAPPMGAGIRVVQNVHIKNGCAFLNHSSGDEERRVFIRLCKQYHCIKAWFSGHFHL 286
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S0I2M8_9CRYP (Hypothetical protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0I2M8_9CRYP)

HSP 1 Score: 276 bits (705), Expect = 8.540e-83
Identity = 133/227 (58.59%), Postives = 168/227 (74.01%), Query Frame = 2 
Query:  635 PTFVLTVLGDLHLDPADMGAHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            P F + VLGDLHLDP+DM  H+E R  IV        L +  N H+VSLGDLGAYGSAGT+E F   + +LD F   +DIV+GNHDLEG+ EF +D+ENL A+  AF+K +P F   IAEK LC+GLSTVRFRD   SSHEV++D+ Q++WF++ L  HSA+DGWKV+VF+HAP MGSGLR +QGVHIKN CAW+NH+  ++ RR F  +C K+  I+AWFSGHFHL
Sbjct:   27 PEFHVAVLGDLHLDPSDMELHDEGRKHIVD------LLRDKPNSHMVSLGDLGAYGSAGTSENFEFTKKWLDSFKIDLDIVTGNHDLEGVDEFFSDKENLEAWMKAFNKRTPYFCTEIAEKVLCVGLSTVRFRDTSYSSHEVYVDQEQIEWFDRVLEHHSAKDGWKVLVFTHAPIMGSGLRTLQGVHIKNGCAWINHTE-EKTRRKFFELCNKHACIRAWFSGHFHL 246
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A836CA66_9STRA (Calcineurin-like phosphoesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA66_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.210e-80
Identity = 130/211 (61.61%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:  686 MGAHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAY-GSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            M  H EARD +   + AEAFL+ET N H+VSLGDLG Y    GT  CF  A++YLDGF     +V+GNHDLEGLGEF +D ENLAAFQ AF   +P ++  +A +TL +GLST RFRDA  SSHEV I   Q+ W ++  AAH+A+DGW+V+VF+HAPPMGSGLRVVQ VHIKN CAWLNHS  D ERR F   CRKY  I AWFSGHFHL
Sbjct:    1 MDDHLEARDHVTSHLSAEAFLLETRNAHLVSLGDLGGYKAQPGTRACFARAKEYLDGFEVDYGVVAGNHDLEGLGEFPSDAENLAAFQDAFGMAAPCWARRVARRTLLVGLSTTRFRDAAHSSHEVHIPRDQLDWLDRVCAAHAADDGWRVLVFTHAPPMGSGLRVVQDVHIKNGCAWLNHSAPDAERRAFAEACRKYPQISAWFSGHFHL 211
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S0W6Z2_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W6Z2_9CRYP)

HSP 1 Score: 261 bits (668), Expect = 1.860e-77
Identity = 128/225 (56.89%), Postives = 157/225 (69.78%), Query Frame = 2 
Query:  641 FVLTVLGDLHLDPADMGAHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            F + VLGDLHLD  DM  H E RD +V  +   A      N H+VSLGDLGAYG AGTT  F  + D+L+GF  P DIV+GNHDLEG+ EF TD ENL AF  AF K +PQF   +A KTLC+G+ST RFR A+ SSHEVFID+AQ+ WFE  L+ H A +GW V+VF+HAP MG GLR +Q VHIKN CAW+NH+  +  R  F+ +C+    ++AWFSGHFHL
Sbjct:   66 FSIGVLGDLHLDEEDMDLHREGRDHVVAGLSGAA------NRHLVSLGDLGAYGGAGTTRNFAFSSDFLEGFKTPFDIVTGNHDLEGMDEFETDEENLDAFLKAFGKPAPQFCTEVAHKTLCVGMSTTRFRSAKWSSHEVFIDKAQIDWFEGVLSRHPASEGWNVLVFTHAPIMGCGLRALQDVHIKNGCAWINHT-DEASRLRFIRLCQANPCVRAWFSGHFHL 283
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S0CZE4_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CZE4_9EUKA)

HSP 1 Score: 257 bits (656), Expect = 1.580e-75
Identity = 126/224 (56.25%), Postives = 160/224 (71.43%), Query Frame = 2 
Query:  653 VLGDLHLDPADMGAHEEARDQIVHQMEAEAF-LMETENLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESP--QFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            VLGDLHLD +DMG+H +AR++I   ++ EAF    +   H+VSLGDLGAYGSAGTT+ F +AR+YLDGF    ++V+GNHDLEG+ EF TDREN   F+  F+ E    QFS  IA   L +GLST RFRD + SSHEV+I   Q+ WF+  L  H +EDGW ++VFSHAPPMGSGLRV+  VH++N CAWLNH+     RR F  + R++G + AWFSGHFHL
Sbjct:   72 VLGDLHLDESDMGSHHKAREEIKQLLKTEAFGTPPSSKSHLVSLGDLGAYGSAGTTQSFELAREYLDGFGIGYNLVTGNHDLEGMDEFKTDRENFKVFKEIFEVEGENGQFSTQIAPNVLLVGLSTERFRDNKWSSHEVYISGKQLDWFQDVLNRHPSEDGWNIIVFSHAPPMGSGLRVLNSVHVRNTCAWLNHAQIPSSRRAFHRLARQHGGVVAWFSGHFHL 295
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S0XFS3_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFS3_9STRA)

HSP 1 Score: 240 bits (612), Expect = 5.900e-69
Identity = 121/241 (50.21%), Postives = 160/241 (66.39%), Query Frame = 2 
Query:  617 ALEPDNPTFVLTVLGDLHLDPADMGAHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAYGS--------AGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            +L   N  + + +LGDLHLDP  M  H   R+ ++  ++       T+NL VVSLGDLG   S        +GTT CF +A  YL GF  P ++V+GNHDLEG+ EF TD EN+ AF + F+K +P F   IA KTL +GLS+V FR A+ +SHEV+ID+ Q++WFE+ +    AE+GWK+ VFSHAPP+GSGLRV+Q  H+ N C WLNHS   R RR F+++ R+   IKAWFSGHFHL
Sbjct:   45 SLRMSNEDYAIAILGDLHLDPRYMDDHYNGREDMIKALKNS----NTKNLAVVSLGDLGESKSVDETTQLFSGTTSCFNLANSYLQGFGVPYEVVTGNHDLEGIDEFKTDEENMKAFLSIFNKPTPYFKREIAPKTLLIGLSSVTFRTAQFTSHEVYIDDQQIEWFERIIKESPAEEGWKIFVFSHAPPIGSGLRVLQENHVVNGCCWLNHS--HRSRRRFIDIVRENKSIKAWFSGHFHL 279
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S3YJA2_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YJA2_9EUKA)

HSP 1 Score: 229 bits (583), Expect = 8.160e-66
Identity = 108/187 (57.75%), Postives = 136/187 (72.73%), Query Frame = 2 
Query:  761 NLHVVSLGDLGAYGSAGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQ--FSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            N  +VSLGDLGAYGSAGTT  F  ++ +L+GF  P +I++GNHDLEG+ EF TD+EN AA++ AFD  SP   FS  IAEKTL +GLST +FRD + SSHEVFI + Q++WF   L AH AE+GW ++ FSHAPPMGS LR +  VH+KN CAWLNH+ G   RR F  + R++G +  W SGHFHL
Sbjct:   11 NTRLVSLGDLGAYGSAGTTSNFEFSKKFLEGFGMPFNIITGNHDLEGMTEFTTDKENFAAWKKAFDVSSPHGTFSQQIAEKTLLVGLSTEQFRDNKFSSHEVFISDPQLEWFASVLKAHPAEEGWNIVTFSHAPPMGSQLRHLNSVHVKNTCAWLNHAQGTTRRRTFYRLAREHGGVSVWCSGHFHL 197
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: B7G833_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G833_PHATC)

HSP 1 Score: 230 bits (587), Expect = 4.200e-65
Identity = 126/248 (50.81%), Postives = 161/248 (64.92%), Query Frame = 2 
Query:  605 TSTMALEPDNPTFVLTVLGDLHLDPADMGAHEEARDQIVHQM-EAEAFLMETENLHVVSLGDLGAYGS----------AGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHL 1315
            +S   L   +  F +  LGDLHLDP  M  +   RDQ ++ + EA+A   +  N+ +VSLGDLG   S          AGTTEC  +A ++L  F  P ++V GNHDLEG+ EFATD+ENL  F     K +P FS  IA+KTL +GLS+  FRDAE +SHEV ID+AQM WFEQ L  H A DGW++ VF+HAPP GSGLRV+Q  H+ N C WLNHS  D++ R F+ + R++  IKAWFSGHFHL
Sbjct:   28 SSPSMLRMSSDQFTVACLGDLHLDPRYMEDYYTGRDQWLNIIDEAKA---DHGNVALVSLGDLGESKSVRPEETSELFAGTTECHELAAEFLQSFGVPYEVVGGNHDLEGIDEFATDKENLKMFLEKHGKPTPHFSRKIADKTLLVGLSSTVFRDAEYTSHEVTIDDAQMAWFEQTLKDHPAADGWRLFVFTHAPPNGSGLRVLQENHVVNGCCWLNHS-NDKKCRKFIELVREHRCIKAWFSGHFHL 271
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BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Match: A0A7S1UHX4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHX4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 7.520e-65
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 2 
Query:  806 AGTTECFRVARDYLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIAEKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMVFSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKAWFSGHFHLRLACCH 1333
            AG + CF  ARDYLDGF  P D+++GNHDLE + EFATD ENLAA+  AF K  P F   IA KT+ LGLST RFR++  SSHEV +D+ Q+ WFE QL AH A DGW+V+VF+HAPP+GSG+R +QGVHIKN CAWLNH+  ++ RR FL + +++  +KAWFSGHFHL    CH
Sbjct:   27 AGCSACFAHARDYLDGFGRPYDLITGNHDLEAMDEFATDEENLAAWMRAFGKTEPMFKREIAHKTVVLGLSTTRFRESPLSSHEVHVDDLQLAWFEAQLEAHPAGDGWRVLVFTHAPPLGSGVRALQGVHIKNGCAWLNHTSDEKRRRAFLRLVQQHPCVKAWFSGHFHL----CH 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6519.17325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH2_9PHAE2.440e-20393.83Metallophos domain-containing protein n=2 Tax=Ecto... [more]
W7TNN9_9STRA7.670e-8353.70Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S0I2M8_9CRYP8.540e-8358.59Hypothetical protein n=3 Tax=Geminigeraceae TaxID=... [more]
A0A836CA66_9STRA3.210e-8061.61Calcineurin-like phosphoesterase n=1 Tax=Tribonema... [more]
A0A7S0W6Z2_9CRYP1.860e-7756.89Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0CZE4_9EUKA1.580e-7556.25Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
A0A7S0XFS3_9STRA5.900e-6950.21Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3YJA2_9EUKA8.160e-6657.75Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
B7G833_PHATC4.200e-6550.81Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1UHX4_9STRA7.520e-6559.66Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6519contigEcto-sp13_S_contig6519:1450..7785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score402.5
Seed ortholog evalue2.2e-109
Seed eggNOG ortholog2880.D8LCJ9
Model size1555
Hectar predicted targeting categorychloroplast
Exons9
EggNOG OGs28TDQ@1,2R044@2759
Cds size1164
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6519.17325.1prot_Ecto-sp13_S_contig6519.17325.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6519 1841..7785 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463899.1036725-UTR-Ecto-sp13_S_contig6519:1449..18401681463899.1036725-UTR-Ecto-sp13_S_contig6519:1449..1840Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6519 1450..1840 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463899.11589-CDS-Ecto-sp13_S_contig6519:1840..19441681463899.11589-CDS-Ecto-sp13_S_contig6519:1840..1944Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 1841..1944 +
1681463899.1267214-CDS-Ecto-sp13_S_contig6519:3089..32751681463899.1267214-CDS-Ecto-sp13_S_contig6519:3089..3275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 3090..3275 +
1681463899.1372166-CDS-Ecto-sp13_S_contig6519:3727..37791681463899.1372166-CDS-Ecto-sp13_S_contig6519:3727..3779Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 3728..3779 +
1681463899.1465979-CDS-Ecto-sp13_S_contig6519:4667..47341681463899.1465979-CDS-Ecto-sp13_S_contig6519:4667..4734Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 4668..4734 +
1681463899.1565785-CDS-Ecto-sp13_S_contig6519:5256..54021681463899.1565785-CDS-Ecto-sp13_S_contig6519:5256..5402Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 5257..5402 +
1681463899.1688285-CDS-Ecto-sp13_S_contig6519:5713..58171681463899.1688285-CDS-Ecto-sp13_S_contig6519:5713..5817Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 5714..5817 +
1681463899.1782436-CDS-Ecto-sp13_S_contig6519:6409..64911681463899.1782436-CDS-Ecto-sp13_S_contig6519:6409..6491Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 6410..6491 +
1681463899.1872623-CDS-Ecto-sp13_S_contig6519:6864..69591681463899.1872623-CDS-Ecto-sp13_S_contig6519:6864..6959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 6865..6959 +
1681463899.1986182-CDS-Ecto-sp13_S_contig6519:7457..77851681463899.1986182-CDS-Ecto-sp13_S_contig6519:7457..7785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6519 7458..7785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6519.17325.1

>prot_Ecto-sp13_S_contig6519.17325.1 ID=prot_Ecto-sp13_S_contig6519.17325.1|Name=mRNA_Ecto-sp13_S_contig6519.17325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
MTSARPRGPVPQLMFFLQLSASAAWLSPNAFHDERFKGSRWGKGVSNSRA
SPNSADSCRSTARRLFGGRGDTSTMALEPDNPTFVLTVLGDLHLDPADMG
AHEEARDQIVHQMEAEAFLMETENLHVVSLGDLGAYGSAGTTECFRVARD
YLDGFHAPVDIVSGNHDLEGLGEFATDRENLAAFQAAFDKESPQFSAVIA
EKTLCLGLSTVRFRDAEGSSHEVFIDEAQMQWFEQQLAAHSAEDGWKVMV
FSHAPPMGSGLRVVQGVHIKNQCAWLNHSVGDRERRYFLNMCRKYGHIKA
WFSGHFHLRLACCHLLLLLLLLLLLLLLLLLLSLVVVVVVVVLPPLLLLV
VGLGLARTCCALLHYGRGGHNLPVLSEAIGVGGWVGG*
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mRNA from alignment at Ecto-sp13_S_contig6519:1450..7785+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6519.17325.1 ID=mRNA_Ecto-sp13_S_contig6519.17325.1|Name=mRNA_Ecto-sp13_S_contig6519.17325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6519:1450..7785+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATCTATGTTGCAATAACAAGCAACAGGATGCAACCTTCAGCCGAATGAG
CGAACTCCACATTGAAGCACCAGCCTAGACGAACAAGCTACTAGCCAACA
ACCCTGTAGATCTAAAGGCCAAGAGGGAACTCAAGATTGCGGGCCTGCAC
AGCACACATGAGCTCAGAACTCCGAACCGATAAACCGATATGCGAACCAG
ATTGGGAACCACGGGGCGCCGAAGCGCGGAGCCCGTGCTGAAAGAGGCAC
GTTTGCCACGAGACCCAGCAGTGCCCTCAATCGACTGGTGTGTGGTGGAA
GGGATCAGGGAGGTGCTTGGGCTAGGAGTCAGGGTCCAACCGGTGGCAGC
CAGGGCATCCCTTGTTAGGTCGTGGTGACACAGCGACACTAATGACGTCA
GCAAGACCAAGAGGGCCAGTTCCCCAGTTGATGTTCTTCTTGCAGTTGAG
CGCCTCGGCAGCATGGCTGTCCCCGAACGCGTTTCATGACGAGAGGTAGG
CAGCTATTCGACACAAAAGTGCTTCTATTTTCGAAAAGATGGTGCAAAAA
GCACCATCTGTACAGTTTGTGATCTTTGGCCGTTTGCGTGAGCTGTTTTT
GGCAGCGCCCGTTGAGCAATCGAAAACGGGCTGCATCCTCCGGTTTCACG
AGGCTCTCGAAGTCAGGGCGGCAAACGAGAAAGAAAATCTGCAATATCCG
ACCTGTTTTTGTGCTTAACTTTGGTGTTTTGATCAACAATGTCGGGGCGG
CTGTTGTTGCGTTTGTGTGCAACTGCGGCACCTCTGTCGGGACATCATTG
AACACTCTAAAGGATAGACTCCGAATCCAAGCAGTACGATGAAGATGGTG
GCGTATCTGAGTGTTGCACAGCACATGGGTGACATGATGGCGGCAGCAAC
GCGCCAGCTTCCAGCCCCGTCGGGCGTGAAGGGCTTCGAGATGTTGCGGG
CGCAAACCATTTTCTATTTGTACGGCTAGTAAAAGAAGCGAAAACATTAC
GTAAAGAGCTTGGAAGATCTTCCCTCCCCCCCGCCCCGGGCAGCGCTACT
ACTGTCTGAGGCCAAACAAACCTCTTGTGCACCCAAACTGGAACAGAGCT
GTTACCAACGAGTGGAGCAGAGTGCGTTTTCGATAAATTTCTTGCAGAGA
GTGCCCTTTCTTGTCTGCTACTAGCTCTGGCGCCCTCTATCGCCCGTTTT
TGTGCGAAACAACCGCAGAGAGACAGCAGTGGAGACCGACCGAGCAACGA
GGGAGGCTTAACGTCTGGTGTAGTCCTCGGGGTGTCTGGCAGACGCGTAT
GCCCACCGGCAGGGTCGTGTAGGGTTTCCGAAAGCGATCGGCGTGTTCCC
GTCCTGTCTCGTGTGCCCTGCATGCGTCTGAACCACCCAAAAGCTGTACA
GGGCGTCACTCTTGCTCCAGTACAGTATCCCCGGGTGGGAGGGGGCTTCA
ATCGGGGGCGGCGCGAGCATCGCTACCACCAAACAAGTGCAGTGCGCCGG
ATGGGCATAGTTTTGTGCCGATTGCCCTTATTTCTTGGAGTGCACCCGGC
ATGCTGCATGCTACAAGTACACCCAAGTTTTACGAAGGATGCTGCCGCCC
TTTGTGCACCTCAGCCGTCCGCCTTCCAATGACCCCACAGGTTTAAAGGT
TCTCGATGGGGGAAGGGCGTTAGCAATAGCAGGGCCAGCCCCAACAGCGC
GGATTCATGCCGATCCACGGCGCGACGGCTCTTCGGTGGCCGAGGCGACA
CCAGCACGATGGCCTTGGAGCCGGACAACCCGACTTTCGTGCTGACGGTG
CTGGGGGATTTGCACTTGGATCCCGCGTGAGTGGGAAGCCGCGTCGAAAT
GGGTGTTGTCTTCATACCGCGCAGATTTTCTGCCGGTGTACCTTTGTGCT
TCGCGTGAGTGAATTAATTTTCCGTGCGACGGAAGCAACACCGCCACGAA
GCAGCTTTTCTTCACTTTGTGGGACCCCAGTCAAGCGTTTCTACGGCCAC
GTGGACAAGGGCAATGGACGGGGTCGATAGACGCCAGTTCCGGGCACGGG
AGGTGCACCCATAACTCAGATGTAATAACTCCACGACAAATGGAGGTCGA
GGTTACCAAAGAGTACTTCTGTGAAGTTTTTAATAATTGGAAGGACGACG
ACCACCGTGTCCAAAAGCGCACTTCTTCATGACAACCCTTTGCTCCCCCG
CTCCCCCCCACCACTTCTGTACCAACACTGCTGATGGTGCTGCCAATATT
CTACCGGCGCTGCTGCTGCTGCGGTTAGTGATATGGGAGCGCATGAGGAG
GCGCGCGATCAGATCGTCCACCAAATGGAGGTACGGACACGAGCATGGTC
CTTCGGTAGGGTTGCACTAAGCCTGGGGATCTTGGCCGACATAACGCTGA
CCGCACGGCATCATGTACCTCACCACACACATGCGAATATAGCCGTAGTG
TCCCCTTTGAGCTGGCGCTCCCCTTGCAATCGTCGGCCCCCACTGAGTCA
GCGTGCTCCATAGCCTTGTTGTCATCTGTACACGTGTCGCCGCAGTGCTC
ATTTTCTTCGAGACCCTGGAGAATATCGTGATGGGGCGGGGTACTTTTCG
AGTAGTCATCCTGAACACCGTCCATCACTGCTGGTGCTGGTGCTGCTGTT
TTTTTTGTCGAAGTGTGTAAGAGTCGTTTTTGCTTGTTTTGTGTTGCACC
CCAGCCCCTTTTGGCCAATCGTTCAAGCTAGAAAATGCTCGACATCATAT
GATCCATGTCGTTGGGTTTGCTAGTGTAAGAATCGTTTGCAGCTGTGACT
GTTGAACACAGCGTTTACCAGGGAGGGGTTGAACACAATGAGCCGAAACC
CTTCCTGTAGCTAACCCTTCGTCGAGAAGTCTACACGATGCTGTCGGGGT
CGTGTGATCGTCTGGCAACCTCGTGCCAACTCGGGGGACTCGATCGATGT
CCTCTTGGTTTTTTTTTCGCCGGAGCACTCGTTGGGTACTTCTGTATGTC
TGTCTACCTGCCTTCCCCTCTCGACCCCCCCCCCCTCCTCTCTCTCCTTC
CGTCTCAGTATCTGTTTCTCTATCTCCCTGTCTCCCTCTCTTTCTGGCTG
TCTTCGTGGTTGTCGTTGTACTTTGTTTTACTTCTTGTTTGCTGCTCTTG
TCCCGTACTCCGTGCCCTCGTTTTATCCAATTTTCTGACGTGGCCATGAA
CTCCACCGCCCCAAGCAGGCGGAGGCATTCCTCATGGAGACGGAAAACTT
GCACGTGGTGTCCTTGGGCGATCTCGGGGCGTACGGTGAGGCGGCTCTAG
GAGAGGGGTGTGACCTGTGCATAAGGCTAGTTCTTCGTCCGTCCGTCCTA
AAGAAGACGCAGCAGGTTGGGCGGTAGCACGATAGAGGGATAGTAGGCGG
GCAAAAGGGGGGGGTCCTTGCACTCTCTTTTGTTGGCCACGCCGCACGTG
CTGACTTCTTTTTGCCCCGGTGTTAAGTTTTCGCCTGTGTTGCTGCTGGT
GCTCCTGCTTGTGCTGCTTCTGCTGCTTCTGCGTTTTCTTCTTCGGCTGG
TTGATGCTGCTACCGTTACTGCTGCTGCGGCTGCCGCCGCTTCTGCCGTC
ATCGGCGTACATAACCACAATCATCCTCGTCCTTCCTCTCTCTCTCTTTC
TCTCTCTCTGTCTGTCTGTCTGTCTGTCTGTCTTGTCTGTCTGTCGGTCG
GTCTGCCTGTCCGTCTTTCTCTCTGTCTGTCTGTCTCTCTCTCTCTCTCT
CTCTCTCTCTGTCTCTTTCTCTCTCTCTCTCTCTGTCTCTTCTCTCCGTG
TCTGCAGGGTCTGCAGGCACCACGGAGTGTTTCAGGGTCGCGAGGGACTA
CCTCGACGGCTTCCACGCGCCGGTAGACATCGTGTCCGGAAACCACGACC
TGGAGGGGCTTGGAGAGTTCGCCACGGACCGAGAAAACCTCGCCGCGTTC
CAGGTGACCAGCAAAGTGTTTTATTACTGTTGGGTCCGTCAGTGCTGTGT
CGGCTCTATTTTTCTTCATTTGCGGGTGTCTTGTTTTACGCGATTCTTGA
TTGTTGAGGTTCTGACTTTCACGGGGGCGAGAGTGAGGGTAGAGAAACTG
TACGACGTCGAACGGCATAGGCGCACCAGGCGAGTGTGTGTCCACTTGGA
CGGTGCGTTAGTGGAGTATTTATTGTCGATAGTAGAGGGACTCGATGAGT
TTGTTGGCTCCAATGTAGCATGGTTGTTGGATCGTTGAATGTGCCGCTTT
TCAATACTCGTCAGGCGGCCTTCGACAAGGAGAGCCCGCAGTTCTCCGCC
GTTATCGCAGAGAAAACCCTGTGCCTGGGGCTAAGCACGGTGCGCTTCAG
GGATGCGGAAGGCTCCAGGTGTGTGCTTTGTCTTTGTTGTTGGCATCGAC
CCCGCGCTGACCGGCTGGCCAACGAAATACGTCAGTCTCAGTGCGGTTGA
AAAGGCAACATGCTTCTGAAGGCCATGGATACGCGTGTGTGTTTGTGTCC
TTCTCGTTAGTGTTGATCGCACCACCCTGGCTAACCAAGGAAGTTGTCAG
TCTCAGTTGAAGATTAGACCCCAAAGCGCTACACTCGGATATGATGTGGG
ATCCCTTGAGGGGAGGGGGCGGCTCATGGTGTGTTTGGTTGTAGGTTGTG
CTTCTCCGTTGACAACATCGAAGTCTCCGAAGGGCTAACGGATTGTAACG
TTCGTGTGTCCTGGTTCGGCAACAAAGTTACCAAGAAAAACGGGTCTTCT
ATTTGTGGCTTTCTCACTCGCTTGAGTGGAAGTACGGCTTTGGTTTTCCC
GTAGATTCGACGTTCGGCTTGATGATGCGACGAAACTCGAGCATTCCCTT
TTCAGACGTGTCTCTCTCTCTCCCGCCCTCGTGCCCCTCCACAAATTTAT
ACGGCCCTCACGCCACCGCTGCCGCCGCCGCCGCCGCCATGATCAACTGC
ACTCAAAAAGCCACGAGGTTTTCATCGACGAAGCTCAGATGCAGTGGTTC
GAGCAGCAGCTGGCGGCACACTCGGCGGAGGACGGGTGGAAGGTAACGGG
ATGCGGCGAGGACGGAGGAGAGCTGTATTGACTAGCAGACCGCCTTACGA
CTCAAACGCATGGAAGAAGGTTGCGCTCGCTGTCCGTGCGGACAACGATG
CATCGGCCACTCTGTGGTGATGTGGCACACCGATGACTGTGCAATTTTTT
TTCTTCTGATGAACGTGCGTGATTTGATTTTTGCGTCGCCTGGAAGTATT
CAATGAATTTCCATGTATATCGTGGGTTCCCTGCCTAGTGTTATTCACTG
ATCACGCTGCTTCTTGTTGCTCGTCTGCTGCTACTCGCCCTGCTGCTGCT
GCTTCCGCTGCTTGCGCCACTGCTGGTCGTGGGGGTGGTGGGGCTTCCTT
TTTACCACGGAAAAGGTCATGGTATTCTCACACGCTCCACCCATGGGATC
AGGGTTGCGGGTGGTGCAGGGGGTGCACATCAAGAACCAGTGCGCCTGGT
TAAACCACAGGTATGCGGGAATGCTGTCAAAGAACGCTGGCGAAACCGCA
GATGCAGAGTGCTAAAGTACGGATGACAAAGCGTCAAACAACAACAAGAC
TCGTATCGGCTTCAACGGTGCATGATGATGAAGTCAATCCATCGAACCAT
TCAAAGCCGCCATGGTTTTCATAAGGAATGAACACTCACAGAAAAGATCG
GTAATTTTGAGCAAGCTGCAGGGTGGCTGCACGTGTACACGCACACACCA
GTTTTGTCGTTGTCATCATGATGAGCTTGCAACTCCTTTGTTTTCTAGTG
AGGTTGCTTGTTGTTGGCTGCTGGCCAAGCCGAATCCTTTTCGGCACGAA
TCTTACTGCGTTGAAAGCTCCTCTTGTGTTGTTGTGTACTTCCATTACAC
CCCTCGCTGCAACCTTTCCCGTGATCCGCCTACTAACCTTGTCAAAAACG
TTGTCTCGACACTTGTCAACTCAATCCTGAACCTCGCTGTGGTCGGCTCT
CATCGCAGTGTGGGAGACAGGGAGCGGCGATACTTCCTGAATATGTGTCG
CAAGTACGGCCACATAAAGGCCTGGTTTTCGGGTCACTTCCACCTCAGGT
TGGCGTGTTGTCACTTGCTGTTGCTGTTGTTGCTGTTGTTGCTGCTGCTG
CTGCTGTTGTTGTTGTTGTCGTTGGTGGTGGTGGTGGTGGTAGTGGTGCT
ACCACCACTTTTGTTGTTGGTTGTTGGGCTGGGCTTGGCACGAACTTGTT
GTGCTTTGTTGCATTATGGCAGAGGTGGGCACAATCTTCCCGTACTCTCG
GAGGCTATCGGGGTGGGTGGGTGGGTGGGTGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6519:1450..7785+

>mRNA_Ecto-sp13_S_contig6519.17325.1 ID=mRNA_Ecto-sp13_S_contig6519.17325.1|Name=mRNA_Ecto-sp13_S_contig6519.17325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6519:1450..7785+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGTCAGCAAGACCAAGAGGGCCAGTTCCCCAGTTGATGTTCTTCTT
GCAGTTGAGCGCCTCGGCAGCATGGCTGTCCCCGAACGCGTTTCATGACG
AGAGGTTTAAAGGTTCTCGATGGGGGAAGGGCGTTAGCAATAGCAGGGCC
AGCCCCAACAGCGCGGATTCATGCCGATCCACGGCGCGACGGCTCTTCGG
TGGCCGAGGCGACACCAGCACGATGGCCTTGGAGCCGGACAACCCGACTT
TCGTGCTGACGGTGCTGGGGGATTTGCACTTGGATCCCGCTGATATGGGA
GCGCATGAGGAGGCGCGCGATCAGATCGTCCACCAAATGGAGGCGGAGGC
ATTCCTCATGGAGACGGAAAACTTGCACGTGGTGTCCTTGGGCGATCTCG
GGGCGTACGGGTCTGCAGGCACCACGGAGTGTTTCAGGGTCGCGAGGGAC
TACCTCGACGGCTTCCACGCGCCGGTAGACATCGTGTCCGGAAACCACGA
CCTGGAGGGGCTTGGAGAGTTCGCCACGGACCGAGAAAACCTCGCCGCGT
TCCAGGCGGCCTTCGACAAGGAGAGCCCGCAGTTCTCCGCCGTTATCGCA
GAGAAAACCCTGTGCCTGGGGCTAAGCACGGTGCGCTTCAGGGATGCGGA
AGGCTCCAGCCACGAGGTTTTCATCGACGAAGCTCAGATGCAGTGGTTCG
AGCAGCAGCTGGCGGCACACTCGGCGGAGGACGGGTGGAAGGTCATGGTA
TTCTCACACGCTCCACCCATGGGATCAGGGTTGCGGGTGGTGCAGGGGGT
GCACATCAAGAACCAGTGCGCCTGGTTAAACCACAGTGTGGGAGACAGGG
AGCGGCGATACTTCCTGAATATGTGTCGCAAGTACGGCCACATAAAGGCC
TGGTTTTCGGGTCACTTCCACCTCAGGTTGGCGTGTTGTCACTTGCTGTT
GCTGTTGTTGCTGTTGTTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTCGT
TGGTGGTGGTGGTGGTGGTAGTGGTGCTACCACCACTTTTGTTGTTGGTT
GTTGGGCTGGGCTTGGCACGAACTTGTTGTGCTTTGTTGCATTATGGCAG
AGGTGGGCACAATCTTCCCGTACTCTCGGAGGCTATCGGGGTGGGTGGGT
GGGTGGGTGGGTGA
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