prot_Ecto-sp13_S_contig6516.17317.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6516.17317.1
Unique Nameprot_Ecto-sp13_S_contig6516.17317.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length315
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6516.17317.1 vs. uniprot
Match: D7G9C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C3_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.170e-120
Identity = 243/321 (75.70%), Postives = 256/321 (79.75%), Query Frame = 0 
Query:    1 WQVLLPQHEKGEMSARLVADAYWMPATSPSDGSSASPCGNSAISALKPTKSKPNDVAPAAAADVPRTLERGSYGPENGDPCMSPLSQGGKPDRNLSADPVPVGKEGLTVNE----LVASGFPLGNGAAAGTIPESGSEKLGAGNRVSPAHGGSASLSTSSTSTTMTPAAGGDEKGTGXXXXXXXXXXXXXXXSSNSMVAAATVQLAARTLVSNTINRKHGRNTNGAVVLKATAWGIEPRVALDKKTHASIQHDVGGGG-AASAGVGARTGLDVAS--ASRIGAGGGRAGGGGQQFLKFEAWSTRASAASSPWAAHPSMRRQ 314
            ++VLLPQHEKGEMSARLVADAYWMP   PSDGSSASPCGNSAIS+LKPTKSK  DVAPAAAAD+PRT+E GSYGPENGDP MSPLSQGGKPDRN  +DPV VGKEGLT NE    LVASGFPLGNGAA  TIPESGS+K  AGNRVSPAHGG ASL                     XXXXXXXXXXXXXXX         TVQLAARTLVSNTINRKHGR TNGAVVLKATAWGIEPR+ALDKKTHAS+QHDVGGGG A+SAGV ARTGLDV +  A+R GAG        QQFLKFE+WSTRASAASSPWAAHPSMRRQ
Sbjct:  604 FKVLLPQHEKGEMSARLVADAYWMPVPLPSDGSSASPCGNSAISSLKPTKSKSKDVAPAAAADLPRTVEGGSYGPENGDPSMSPLSQGGKPDRNPCSDPVAVGKEGLTGNERTPKLVASGFPLGNGAAVATIPESGSDKPAAGNRVSPAHGGGASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLAARTLVSNTINRKHGRTTNGAVVLKATAWGIEPRLALDKKTHASLQHDVGGGGGASSAGVAARTGLDVGATGATRDGAGXXXXXXXXQQFLKFESWSTRASAASSPWAAHPSMRRQ 924
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6516.17317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9C3_ECTSI1.170e-12075.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6516contigEcto-sp13_S_contig6516:278..1988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6516.17317.1mRNA_Ecto-sp13_S_contig6516.17317.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6516 278..1989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6516.17317.1 ID=prot_Ecto-sp13_S_contig6516.17317.1|Name=mRNA_Ecto-sp13_S_contig6516.17317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=315bp
WQVLLPQHEKGEMSARLVADAYWMPATSPSDGSSASPCGNSAISALKPTK
SKPNDVAPAAAADVPRTLERGSYGPENGDPCMSPLSQGGKPDRNLSADPV
PVGKEGLTVNELVASGFPLGNGAAAGTIPESGSEKLGAGNRVSPAHGGSA
SLSTSSTSTTMTPAAGGDEKGTGGSDCGGSGGGSVTGRSSNSMVAAATVQ
LAARTLVSNTINRKHGRNTNGAVVLKATAWGIEPRVALDKKTHASIQHDV
GGGGAASAGVGARTGLDVASASRIGAGGGRAGGGGQQFLKFEAWSTRASA
ASSPWAAHPSMRRQA
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