mRNA_Ecto-sp13_S_contig6515.17316.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6515.17316.1
Unique NamemRNA_Ecto-sp13_S_contig6515.17316.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI)

HSP 1 Score: 563 bits (1450), Expect = 3.450e-199
Identity = 284/298 (95.30%), Postives = 289/298 (96.98%), Query Frame = 1
Query:    1 LEGVKIRSLEEYERRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFE---MTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSMHFVKV 885
            LEGVKIRSLEEYE+RLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV  C  +RDPEQAELVE+EGLRNLLAAFQDQRVALYGDP+STKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEE GIQFE    TKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILS+HFVKV
Sbjct:   55 LEGVKIRSLEEYEKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEENGIQFETVIQTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSLHFVKV 352          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA)

HSP 1 Score: 314 bits (805), Expect = 3.820e-97
Identity = 173/318 (54.40%), Postives = 210/318 (66.04%), Query Frame = 1
Query:   10 VKIRSLEEYERRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPF-----------------------STKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFE---MTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSMHFVKV 885
            V     E  ERRLYS FDS EEVP VLVVGATGE GRVVVRKLLLRGF VRVLVRNLYSSTLDLLGTG T+ QGDL N  SIVDAVSGVDKV     SRD + A+ VE+ G +NL++ FQD RVA YG  F                       STK+TLF+F+R  DRELW++ +++ +   W  NKF +GT G   + E G  +VES ++ LN+  FSGL VR  GDGK YR ILR K YE  G+QFE    TKPNKWQTHRLPFS F+A++ G  ++    + +DR  V+Q+A+ Y+R P D   FI+S+ F+KV
Sbjct:  431 VGFADAEALERRLYSQFDSPEEVPEVLVVGATGETGRVVVRKLLLRGFKVRVLVRNLYSSTLDLLGTGVTYTQGDLGNAASIVDAVSGVDKVMFLAQSRD-DSAQDVEFAGFKNLISTFQDSRVADYGTAFILTYPXXXXXXXXXXXXXXXXXXSTKRTLFKFSRPMDRELWSLGKEAAR-LKWAPNKFDHGTLGGVGVQELGDLSVESPKLDLNMGAFSGLVVRLLGDGKQYRIILRTKLYEMNGVQFESVVQTKPNKWQTHRLPFSTFEAHVGGTNIEGAQQVRLDRRDVKQIAVAYRRAPSDDGTFIVSLDFIKV 746          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR)

HSP 1 Score: 207 bits (526), Expect = 2.390e-60
Identity = 123/293 (41.98%), Postives = 173/293 (59.04%), Query Frame = 1
Query:   58 FDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELW--AVDQDSQQSAMWKSNKFGYGTFGSTRM---------YESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQF---EMTKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFN----FILSMHFVK 882
            F+ +++ P VLV GATGE GRV+VRKL+LRG++VRVLVR+L+SSTLDLLGTG +F +G L +Y S+++A   VDKV C   SR  E+AE +EYEG+ NL+ A+QD RV  YG   +TK  LF F  E D   W   V ++ ++ A  K  +  +   G  R+         YE G A V +   +LNL GFSGL +RC GDGK Y  +LR       G+++     +  NKW + R+P S+F AY      +     E+DR  V+Q+AI +++  V P      F L + ++K
Sbjct:    3 FEEDDQPPEVLVAGATGETGRVIVRKLVLRGYNVRVLVRDLFSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVVCAVGSRSVEEAEAIEYEGVGNLIRAYQDSRVQYYGRAEATKLVLFNFADEGDLGKWKRVVPEEGEEGA--KPPRVNFQITGPNRVAFMGHVFSKYE-GMAEVRTIPSRLNLRGFSGLLLRCIGDGKNYFIVLRTGAGVREGVEYCAQIKSYKNKWGSLRIPISSFKAYDIKDHSRRRDAPELDRGDVRQMAIQFRKPVVSPEKDDGRFYLGVDYLK 292          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR)

HSP 1 Score: 207 bits (527), Expect = 5.300e-60
Identity = 117/291 (40.21%), Postives = 172/291 (59.11%), Query Frame = 1
Query:   58 FDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRM------YE--SGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEM---TKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPV----DPFNFILSMHFVKV 885
            F+  ++ P VLVVGATGE GR++VRKL+LRG++VRVLVRNLYSSTLDLLGTG +F +G L +Y S+++A   VDKV C   +R+ E AELVEYEG+ NL+ AF D RV  YG   +TK+TLF F  E     W     S+     +  +  +   G +R+      Y   SG A + +   ++NL GFSG  +RC GDGK +  +LR  +  + G+++     +  NKW++ R+  S+F  +      +     ++DR  ++Q+AI Y++  V    D   F L + ++KV
Sbjct:   51 FEDSDQPPEVLVVGATGETGRIIVRKLVLRGYNVRVLVRNLYSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVICAVGARNLEDAELVEYEGVSNLIRAFHDSRVQYYGRSEATKRTLFNFGNEEHLAKWKRVVPSEGFDGARPPRVNFQMTGPSRVAFMGHVYSTYSGQAEIRTVPARVNLRGFSGFVLRCIGDGKNFFLVLRTSESVKNGVEYVAELKSHMNKWESVRIALSSFKPFDMKDGTKRRDAPQLDRGDIRQIAIQYRKPVVLPEKDDGRFYLGVDYLKV 341          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A7S2ZMD3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMD3_9RHOD)

HSP 1 Score: 191 bits (486), Expect = 2.040e-54
Identity = 130/328 (39.63%), Postives = 178/328 (54.27%), Query Frame = 1
Query:   67 EEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAMW-------------KSNKFGYGTFGSTRM--------YESG----------YATVESQQI---------------KLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEM---TKPNKWQTHRLPFSAFDAY-LYGQVVQAEAGMEVDRASVQQLAIGYKREPV-----DPFNFILSMHFVKV 885
            EE+ P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++  GD+T+  ++++AVSGVDKV C   +R   +   VE +GL+ L+ AF D R A YG   +TK TLF+FNRE D   W     S++                 ++N    G  G  +         + SG          ++  + QQ+               KLN+ GFSGL VRC GDGK YR + R    ++ G+ +E    T   KW T RLP  +F    L G  V  E   E+DR+ V+Q+ I Y R+P+     DP  F L++ ++KV
Sbjct:   80 EEQPPVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVVCSVKARSESEVREVELDGLKKLVRAFHDVRHADYGRTEATKVTLFKFNREKDFRRWRSPGGSEEDDELVRKPARVDFRMNVRNNAVFTGQVGRRKARLECLLYGFVSGVLRAPIDVSMFSFDKKQQVFDTYTGHAELICDLKKLNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGVIYEAEFATVSGKWSTIRLPLVSFKPRSLSGSSVPRELE-ELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMKV 405          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 7.730e-53
Identity = 129/327 (39.45%), Postives = 177/327 (54.13%), Query Frame = 1
Query:   67 EEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAMW-------------KSNKFGYGTFGSTRM--------YESG----------YATVESQQI---------------KLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEM---TKPNKWQTHRLPFSAFDAY-LYGQVVQAEAGMEVDRASVQQLAIGYKREPV-----DPFNFILSMHFVK 882
            EE+ P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++  GD+T+  ++++AVSGVDKV C   +R   +   VE +GL+ L+ AF D R A YG   +TK TLF+FNRE D   W     S++                 ++N    G  G  +         + SG          ++  + QQ+               KLN+ GFSGL VRC GDGK YR + R    ++ G+ +E    T   KW T RLP  +F    L G  V  E   E+DR+ V+Q+ I Y R+P+     DP  F L++ ++K
Sbjct:   80 EEQPPVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVVCSVKARSESEVREVELDGLKKLVRAFHDVRHADYGRTEATKVTLFKFNREKDFRRWRSPGGSEEDDELVRKPARVDFRMNVRNNAVFTGQVGRRKARLECLLYGFVSGVLRAPIDVSMFSFDKKQQVFDTYTGHAELICDLKKLNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGVIYEAEFATVSGKWSTIRLPLVSFKPRSLSGSSVPRELE-ELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMK 404          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A5J4Z1C0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1C0_PORPP)

HSP 1 Score: 185 bits (469), Expect = 7.960e-51
Identity = 120/302 (39.74%), Postives = 172/302 (56.95%), Query Frame = 1
Query:   52 SPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTN-YRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADREL--WAVDQDSQQSAMWKSNKFGYGTFGSTRMYESG-----------YATVESQQIKL---NLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEM---TKPNKWQTHRLPFSAFDAYLYGQV-VQAEAGMEVDRASVQQLAIGYKREPVDPF----NFILSMHFVK 882
            S FD+EEE P VLVVGATG +GRVVVRKLLLRGF VRV+VRNL+SSTLDLL +   F +GD+ +    + +A+SGVDKV C   +R  ++ + VE +GL+NL+ AF D RV  +G   STK TLF+F+R+  + +  W V  D     +  +         S  M + G           Y  V    +KL   NL GFSG+ +R  GDG  YR  L+    +  G+ +     T+ +KW T RLPFS+F A    Q+ ++     E+DR ++Q +A+ Y +   +P     +F L++ ++K
Sbjct:  108 SEFDNEEEAPLVLVVGATGRVGRVVVRKLLLRGFKVRVMVRNLFSSTLDLLPSSVEFVKGDVRDSIFELQEALSGVDKVICLVGARSEDEMQEVEVQGLQNLVQAFHDIRVQEFGPEESTKITLFKFSRQGAKYMDRWVVPTDDIGERLASAGLVAKPPRVSLFMNDKGNGVLVGKVFEKYNGVAQAVLKLDQPNLKGFSGVILRVIGDGNTYRIALQCGSTQSAGVSYVASFKTEKSKWATIRLPFSSFIAMSDKQMNLRVRDAEELDRTNIQSIALQYTKSQDNPEKESGDFYLAVDYIK 409          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A4D9D9K4_9STRA (NmrA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.120e-49
Identity = 116/272 (42.65%), Postives = 164/272 (60.29%), Query Frame = 1
Query:   70 EEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSA--MW--KSNKFGYGTF-GSTRMYESGYATVESQQIKLNLSGFSGLAV--RCCGDGKP-YRFILRDKQYEETGIQFEMTKP---NKWQTHRLPFSAF----DAYLYGQVVQAEAGME-VDRASVQQLAIGYKRE 837
            E+ PTVLVVGATG++GR VVRKL+L+G+ V+VLVRNLYS+TL+LLGTG ++ +GDL++  S+  A  G DKV     +R+   A  VEY GLRNL  AFQD RV+  G   +TK+TLF+F + ADR +WAV   S + A   W  +  + G   F GS  +   G   +ES+++ LNLS F GL +  +  GD +  +RF++R   Y E G+Q+E+  P   N++   R+ F  F    D   Y  V+    G+  +D   V+Q A+   RE
Sbjct:  142 EKTPTVLVVGATGDIGRQVVRKLILKGYRVQVLVRNLYSTTLNLLGTGVSYVKGDLSDLSSLRTACDGADKVVYVAQAREDGDARTVEYLGLRNLAQAFQDTRVSDAGKRVATKRTLFKFRKPADRGVWAVATPSAEGAEGAWTVQDERSGRPAFVGSLPVGPGGSMVLESKKLGLNLSKFGGLLMLFKAQGDAQTSFRFVIRTSAYAEQGVQYEIALPLVRNRFTAFRMNFRDFVPMKDGMPYAGVLGGLGGVTALDPGDVKQFAVMAVRE 413          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: M2VV10_GALSU (Transcription repressor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV10_GALSU)

HSP 1 Score: 172 bits (437), Expect = 2.690e-46
Identity = 106/269 (39.41%), Postives = 149/269 (55.39%), Query Frame = 1
Query:   85 VLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAM-------------WKSNKFGYGTF-GSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEM---TKPNKWQTHRLPFSAFDAY----LYGQVVQAEAGMEVDRASVQQLAIGY 828
            VLV+GATG++G ++ +KLLLRG+ VRVLVRNLYSSTLD +GTG TFA+GD+    S+ DA+  +DKV     + D ++ E VE+ GL+N++ A  D +   YG   S K TLF+F+R+ D E W    D  +S +             +  N      F G     + G A + S+  + NL  F GL +RC GDGK Y   LR +  +   +++     T PNKW T RLPFS F A     +   V+  E   E++ + V QLAI +
Sbjct:  118 VLVLGATGKIGNIITKKLLLRGYRVRVLVRNLYSSTLDAVGTGCTFAKGDVRELSSLYDAMENIDKVIWAVGTSDSQETETVEFNGLQNVIKALHDSKFQQYGSEESAKVTLFKFDRKTDFENWKPVLDEFRSRLASVGLQKRPPKIEYMQNSRNNAVFTGKIFDADGGTAEIASKIDQHNLEEFEGLIIRCIGDGKTYGLELRTRSGDNAQVEYLARFRTVPNKWLTIRLPFSKFVAVPKEGILRPVLVTE---EINLSDVYQLAINF 383          
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Match: A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM)

HSP 1 Score: 173 bits (439), Expect = 2.870e-46
Identity = 108/257 (42.02%), Postives = 143/257 (55.64%), Query Frame = 1
Query:   79 PTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCCSRDPEQAEL--------------VEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRELWAVDQDSQQSAMW----KSNKFGYGTFGSTR---------MYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEETGIQFEMT---KPNKWQTHRLPFSAFDAYLYG 759
            P VLVVGATGE GR++VRKL+LRGF VRVLVR+L++ TLD LGTG +F +GDL +  +++DAVSGVDK+ C   +RD E                  VEY G+  L+ AF D R  +YG   ++K TLF+F R A  + W   Q S   A      +  +  +   G++R         +YE G A  +    + NL GFSGL +R  G+GK YR +LR +     G+Q+  T     NKW T RLPFS F  Y  G
Sbjct:  125 PEVLVVGATGETGRIIVRKLVLRGFRVRVLVRDLFTKTLDTLGTGVSFVKGDLRDADTLLDAVSGVDKIVCAINARDTEAPAAGADAQGDGDIGYADVEYGGVARLVRAFHDSRHQMYGKAEASKVTLFQFGRPAAFDAWTAVQPSSALAEMGMAARPARVSWTMTGASRAAFLGQVFEVYE-GVAEAKCAPRRYNLLGFSGLVLRVIGNGKRYRLVLRTRGAAVVGLQYVATFATVKNKWTTVRLPFSEFTPYAAG 380          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6515.17316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B1_ECTSI3.450e-19995.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGW1_9STRA3.820e-9754.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R7Q993_CHOCR2.390e-6041.98Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J7E6_9FLOR5.300e-6040.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZMD3_9RHOD2.040e-5439.63Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3EC31_9RHOD7.730e-5339.45Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z1C0_PORPP7.960e-5139.74Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A4D9D9K4_9STRA1.120e-4942.65NmrA domain-containing protein n=2 Tax=Monodopsida... [more]
M2VV10_GALSU2.690e-4639.41Transcription repressor n=1 Tax=Galdieria sulphura... [more]
A0A1X6PIK3_PORUM2.870e-4642.02Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6515contigEcto-sp13_S_contig6515:1558..7704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score563.1
Seed ortholog evalue7.4e-158
Seed eggNOG ortholog2880.D7G0B1
Model size885
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
Ec32 ortholog descriptionGalactose-binding domain-like
Ec32 orthologEc-02_001140.1
EC2.3.1.48
Cds size885
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6515.17316.1prot_Ecto-sp13_S_contig6515.17316.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6515 1558..7704 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463898.4468575-CDS-Ecto-sp13_S_contig6515:1557..16321681463898.4468575-CDS-Ecto-sp13_S_contig6515:1557..1632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 1558..1632 +
1681463898.4603226-CDS-Ecto-sp13_S_contig6515:2353..24261681463898.4603226-CDS-Ecto-sp13_S_contig6515:2353..2426Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 2354..2426 +
1681463898.4719386-CDS-Ecto-sp13_S_contig6515:2889..30421681463898.4719386-CDS-Ecto-sp13_S_contig6515:2889..3042Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 2890..3042 +
1681463898.4834385-CDS-Ecto-sp13_S_contig6515:3280..33181681463898.4834385-CDS-Ecto-sp13_S_contig6515:3280..3318Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 3281..3318 +
1681463898.4939182-CDS-Ecto-sp13_S_contig6515:4003..41021681463898.4939182-CDS-Ecto-sp13_S_contig6515:4003..4102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 4004..4102 +
1681463898.5062099-CDS-Ecto-sp13_S_contig6515:4609..47731681463898.5062099-CDS-Ecto-sp13_S_contig6515:4609..4773Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 4610..4773 +
1681463898.5201952-CDS-Ecto-sp13_S_contig6515:5531..56221681463898.5201952-CDS-Ecto-sp13_S_contig6515:5531..5622Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 5532..5622 +
1681463898.5345657-CDS-Ecto-sp13_S_contig6515:6277..63561681463898.5345657-CDS-Ecto-sp13_S_contig6515:6277..6356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 6278..6356 +
1681463898.5449712-CDS-Ecto-sp13_S_contig6515:7591..77041681463898.5449712-CDS-Ecto-sp13_S_contig6515:7591..7704Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6515 7592..7704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6515.17316.1

>prot_Ecto-sp13_S_contig6515.17316.1 ID=prot_Ecto-sp13_S_contig6515.17316.1|Name=mRNA_Ecto-sp13_S_contig6515.17316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
LEGVKIRSLEEYERRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRG
FSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVRCCCC
SRDPEQAELVEYEGLRNLLAAFQDQRVALYGDPFSTKKTLFRFNREADRE
LWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFS
GLAVRCCGDGKPYRFILRDKQYEETGIQFEMTKPNKWQTHRLPFSAFDAY
LYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSMHFVKV
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mRNA from alignment at Ecto-sp13_S_contig6515:1558..7704+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6515.17316.1 ID=mRNA_Ecto-sp13_S_contig6515.17316.1|Name=mRNA_Ecto-sp13_S_contig6515.17316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6515:1558..7704+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGAGGGTGTCAAGATCAGGAGTCTCGAGGAGTACGAGAGGCGACTATA TTCGCCGTTCGACAGCGAAGAAGAGGTGCGGTAGCTCTTGTGCTACGAAA GAAATTTTCCCGATATTCGGCGCGATGTGGTGATGCTGTGTTTGGTGGGT GGTGCCGCCAAACTTTTATCTGTTAGGCCGGGTTTGCCGGCTATGAGACA ACGGGGGGGAGGGCATCGTTTCAAGTGGGGTACCAGGAGATGAAAGAAGG GGGAGATTATGTTTCAAGAGTTGGCGACGGAATTCGAGGCCGTTGTTCGT GAGGCGTGTGTTTTCTCCGGAGGCTAGGGCCGTCATCGTTAGTTCGACGG GCCTAAGGGCAGAGGAGGCGAGGGGATGGGATACAATGGTGTCCTCCTTT TTTGAGCTTTCTACGCCTTTTTTGAAAGTGCGTCCATGTTCTGTGTGAGT TGTATCAGATTTTCTGTTCTGTTTCTGTATGACTGCTGGTTATGAGAGAA ACGGCTTTACCATAGATAACCCGACGTTCGCTGCGACTTACGGTCTTTGA ACTTACTGCGCATCCTTTTCGCTCCCGTCACACCCACCGCAGCGGATCGA CCGCTTTCGTCTGGTCGTTCTGTTTTTCTGTGCGAGGGATAGGCGCGTGG CACCTAGCTCCCTAAAGAGTGATCTTTGACAGTTGAACCATGCGACGTTG GTGTGCCTCGTTTTCTCGTCTCCTTTCGTGTTGTGCTAATATTCACCCCG TTATTGTCTTCGTGGTGTTGTGCTGATGTATTGCTTTGGCGGTCAGGTGC CGACGGTGCTAGTGGTGGGGGCTACGGGAGAGATGGGGAGGGTGGTAGTG AGAAAGCTTCTCCTTCGAGGTGAGGTGATGTTCCCCCATTTATGCTTGTT GGTCTCAACTTTTGTTACTTCATACCTCCGTTGATTGTCTCCCTTTATCT TAATACTATACAGTTTTGTTTTTTAAGAACGGTTTCATCAAGGGTTTCAT CGGTATGATTGTAGTCACGGATGGCGTTCGTTCACGTTCACGTTCACCAG CCGTCATAGCCGACTCGACCACGTCGAAATCTGACGGTTTCATGAAGAAC GGATTCAAGAACGATTTCATGGAGTTTTCACTATTTTGGCTAGAATGAGG AGCTGCAACCCGGGGCGACGCGTGTGTGTGGGAGGTTATGTCTTCAATAT TTCTCCGACCCACCACTTGTTCCTCCCTCTCCTCCGTTCCACGCACCCGT CCAAGCCCAATCTTGGTTGTAGCTAACAGCAGTCAATGCCCAACCCTACC CCTAAGCCAAACCTCCTCTTTTCTTTGTGAAGGGTTTTCTGTGAGGGTGC TGGTGCGAAACTTGTACTCTAGCACGCTGGACCTTCTGGGAACGGGTGCG ACCTTTGCCCAGGGGGACCTGACTAACTACCGCAGCATCGTCGACGCCGT GTCTGGTGTGGACAAGGTGCGTTGTTGTTGTTGCTGTTGTCGTGATGATG ACTGATTTTTTGCAACGGTTCTCGCTGGGACGCGGGATACAAACGCGATT CTTGGTACAGTATGTGCAGTGTTCGACGCCACGAACTTCATGTTTCGCGT TCATATAATTTGTTTCTGTATTTTGTGGTTCGTTTTTTTCGTTTTTTTCG TGGGTTCTCTTGATTTTTTTTGTTCCCCCCCCCCCTTTTTTTTTTTTTTT TTATGATGTTATTTATTTGTAAGCGAGGGATCCGGAGCAGGCAGAGCTCG TGGAGTACGAGGTGGGTGCGGGTTTTTCTTTAGCAGCATCGGCCGCGTTG ACCGGCTAAATATACGGAAAGCATTGTTCTTTGCGGTTTGCGCGCCGCGT GGGTGTCTTTGTTGTTTGCGTTGACCGCGCTGACCGACTGTCTAATGAAA AATTCTCCAGTCTTGCGTTGTAGCCGGATAAAAAACGCAAAGCATGCTTT CTAGTCTTTGACCCTCCCCCCAGACGAAGCAGCCGCGAGGTAGGCTGGAC GACATGGGGGGTGTGTCTGTTTGTTTCCGACGCTCTTGCTTCTCCTTCTC GGGAACTGTTTGTCGAATTTTTTGTCGCTCATGGACTTATGATTCAGGCG CTTTTTCTCCTTTCACTCTCCTCAGTTGCTGTTGATGTTCACTCCTCACG ACGTTATGCGAGTCTTCTCTCGTCTATTGTAGCGTTAGATAGCCTTCCTT CGGTTGCACGTGCGGTATTGCATTTGTCTATTACGTTGGTGTCTGTCTGT GTAACTCTTGTCGAGGAGGTCGTCCTAGAACACCGCGTCAGGAATTGTAT TTGTGACTCCTTTCGAGCATTCCAAAGAAGTTCCAGATGCATACGTTGGA GTAGTTGTTGTTGCCGATCCGCCGAATCGTTCCGCGTAGTCCAGTAACCA TACCGCACGCTATTACTGTACCGTTTCATTTACCTCACCACTCCAGGGTC TACGGAATCTGTTAGCGGCCTTTCAGGACCAGCGGGTGGCCCTCTACGGA GATCCGTTCTCCACCAAGAAGACGTTGTTCCGGTTCAACCGAGAGGTGAA CATGGGATGGGATGGGATGGTTTGTGGTGTGATAAGGGTAGGGTGGCGTT GGGTGGTCCCGATTGGGATCGGATTGGAAGGCAAGGAAGGCTTGGACGGG CAGAGGAAGGCATGCGCGCAACTGTCGACCACAGAGCTCCGTACATGAGT GGCAAGAGCAACGGCACAAGGCGCTGCACCACTGAAATGCTAAGCTTCTT CATTGAGCTTGATTCTTGAAAAAAAATGCTGATAGCGCCTGTACTTAGTG ATTTGGTAGTTGACATCTTTTTTCCTCGAAAAACTCAAAATCGAAGAACC TGAGCAGCAGCTTTGTGAGCTCGATTAAGAAACCCTGCATATACCCTGCA GAGGGGCCACGGGGTCCTTGTAGCATGACCCTATTTGTACAGTTAAGAAC CCCATCCTTGACCACAATAAGAGGTTCTGAAATGTTGGCGCTCACTGCAT TCTACTTTTATAAGCCGACCCTACATCGACCCCTCGTTTTTTTTTTTTTT AGGCGGACCGCGAGCTGTGGGCGGTGGACCAGGACTCCCAGCAAAGCGCC ATGTGGAAGTCGAACAAGTTCGGATACGGGACGTTCGGCAGCACCCGCAT GTACGAGTCCGGGTACGCGACGGTGGAGTCTCAGCAGATCAAGCTCAACC TCTCCGGGTTCAGCGGGTAAGCCGGAGCGTCAGGTGTTGGTGCTGTTCAT TATTTCGTGGATGTTGTGGATGCATCCGGTGCAGCACCGCTGTCTGTTCG TTCGCGAGTAGTGTATATGCTCCGGTACGCTGCTGTTTCTTCTGTCGTGA ATGTTGTGCATCCAGTGCGCTGCTGTTTGTTCTTTGGTTCGGTCCACGTG CGGAATGCAGTTGTTAGCGTTTCGTGTATCGCCCCTAGACGTTTGTTTAT TGCCATCCAGCGCAGCATCTAGTTTACCACGGAAGCTGTCCGCGTCGATT CAACCGGTACGGTTATTTGCCATCCAGCGTTCTAGTTTATCACGGAAGCC GTCCGCGTCAGCTGGACCGGTACGGTTGTTTGCCATCCAGCGTATCTAGT TTGCCACGGAAGCCGTCCGCGTCAATTGGACCGGTACGGCTCCGCAAATG CCAAGGCACGTTTTAATTGATTATTCGTGTTTAGAACTCAACCAAAAATG ACACCGACGAACATGTTGCTCTACCGCTTGGCGACTACTGTAGCTCCTCT TCCTGTCTGAACCTATTTCGCCCCCCCTACTTTGGCAAAGTAGCAAGGAA CGATTGGCCACGGGTGATCGGTCCCATGGGGGACAACTGCTGTCCGTCCT CTCGAGGACGTGTGATCAGTGGCCCAACCGCTATGTAAGGCACGCAAAAC ATGAGTTCCCCCTGTTTTCTCCATGTATCTCTGTGCCCCCTCCCCCCACA CACATATCGTCATTGATTGGTCAGTCTTGCGGTCCGCTGCTGCGGAGACG GGAAGCCGTACCGCTTCATCCTCCGGGACAAGCAGTACGAAGAAACCGGC ATCCAGTTTGAGATGGTCATCCAGGCGAGTCGATAGGTGGAGTGGAGTCG GAAAACCCGCTCATGCTTGAGTCAGTGGCGTGGTCGCCTTTTGCCACCGC GGGTGTTTGCTGGTTAATGGTGGAAAGCCCCGTATGTACGTGGGTTGAGA GGGTGGCGGATTTCCGTTGATGCTGCGGTTGTTGTTATTGGTACTTGGTT GTGCTTTTTGTTCCTCTATCTTCTTGTCCGCGCTGTTGTTGCTGCCGATA GGTCCCTTTTTCTTCCTCGTCTTACCACCGCGAGAGCTCTTTTTTTTTTT CCCTCGTCTCGTTGTTGACTCTCTTTGTTTCGTCCCGCAGCGGGCGTTCG CGCGTGCCTCTGTGTTTTGCGGGTTGCGATGGTGCTCGTGGCAGTGTCTT TCCCGTGTGTCCCTTCTTTCCCAACTCATTGTTGCTTCTTGCTCTCGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTACTGTTGCTGCTGTAACTGCTGCC ACTCCGGCCGCTGGTGCATCTACCACGACTACTTCTGCTGCTCCCTGCTG CTGCTGCTGCTGCTGCTGCTGCGGAACGCTGTTGCTTCTACCGCGGAAAC AACCACTGAACAACATGACACCCGAAACGTCTTGGTTCTCGCTGGCACCA CCACCACCACCCCCCTCCAGACGAAGCCGAACAAGTGGCAGACGCACCGC CTCCCCTTCTCCGCTTTTGACGCCTACCTCTACGGCCAGGTTGTGCAAGG TGAGTCGGTGGGTTCCCGTTGCGCTTGCTGCCATTGCCACAGCTGCTACT GCTACGGCTGCCACAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTCACCATTTTCTTTGCGACAGCAGTAAACGGTGTGGCA GAAAACGGACAAAAAGCCTTCCAAGAAGCCAGGTCGCGGTGTTCTTGTCT GCTTCTTGGTCCGCCAGGAAAGGGCACCGCAATACTCAGTGGTTTTGGCA AGTCGGCGTGGTGAATCAGGGTCAATCCTGAGCCATCTTGCTTGTATACC TTTCTTGTGTCACGCAACCCCCCGGTACCAAGGATGCATGACGGACGCCA CCACGCCTCTTCGACCGAGCAACATACAGTATCTCGGTTACTCTAGATTA CTCTGAAGGCAGAAGAGGTTGCGGTGACGATAACAGGTGGCATTGGCACC ATCTCGTCGAGAGTTTGCCGAAGATAATAATGATGTGATCAGTGGGACCC TCTTGATGAACACCACCACCCAATGTTAAGGAGCACGCCCTTGGTTGTGT TCGCTCATTTTTGGAGCCATCTGTTTCCTAACGTGGGCGTTGGTAGCACG CGTCTTTTTTTCCCTTTGTTTCCAAGAAACTACCCTGGTCGAGACCATGC TCACTTTCATGTTGGATCGGAAGTACACGATCAACACACTAATCCTAGCG CTCACAGCCATATATTCATTTTTTTTTGTCTCACTTCAAGTCAGCGCTCA CAATATTTTACTCCAACCCGTGGTCACACAGAAGGGTTTCAGGCCTTTCA CTTCGGAACTTGCTCATGCTTTTCTTCACTGAAATATTTATGCAAACCAA AACAGACAGTGTACCCGTTCGACACATACCCACAGTCGAAGGACATGTGT TGCAGTCTTTTACCGTGAGTGGGAGATTACGCTGTGTGCATGCCTGTCTC AATGCTCGGTCCGTTTGTCCTGATTCCTTGTCGTTGATGTTGTTCTTGTT GCGTGCATGTCGCGATGCTTGGTCTGTTTGTTCTGGTTTTTGCACGTTGG TGTTTTTTGCTGTGCATGTCTCAACGCTCCGTCCGTTTGTTTTGCTTTAT TGTGTGTTGGTGTTGTTTTTCTTGTGTGCATGTCGCGATGCTTCGTCCGT TTGTTCTGCTTCCTTGTGTGTTGATGTTTTTTTCTTGTGTTCATGCGTGT CTCGATGGTTGGCCTGTTCGTCCTGGTTCCCCAGCTGAGGCGGGTATGGA AGTGGACCGAGCATCGGTGCAGCAGCTGGCGATAGGGTACAAGCGCGAGC CGGTGGACCCGTTCAACTTCATCCTCTCCATGCACTTCGTCAAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6515:1558..7704+

>mRNA_Ecto-sp13_S_contig6515.17316.1 ID=mRNA_Ecto-sp13_S_contig6515.17316.1|Name=mRNA_Ecto-sp13_S_contig6515.17316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6515:1558..7704+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGAGGGTGTCAAGATCAGGAGTCTCGAGGAGTACGAGAGGCGACTATA
TTCGCCGTTCGACAGCGAAGAAGAGGTGCCGACGGTGCTAGTGGTGGGGG
CTACGGGAGAGATGGGGAGGGTGGTAGTGAGAAAGCTTCTCCTTCGAGGG
TTTTCTGTGAGGGTGCTGGTGCGAAACTTGTACTCTAGCACGCTGGACCT
TCTGGGAACGGGTGCGACCTTTGCCCAGGGGGACCTGACTAACTACCGCA
GCATCGTCGACGCCGTGTCTGGTGTGGACAAGGTGCGTTGTTGTTGTTGC
TCGAGGGATCCGGAGCAGGCAGAGCTCGTGGAGTACGAGGGTCTACGGAA
TCTGTTAGCGGCCTTTCAGGACCAGCGGGTGGCCCTCTACGGAGATCCGT
TCTCCACCAAGAAGACGTTGTTCCGGTTCAACCGAGAGGCGGACCGCGAG
CTGTGGGCGGTGGACCAGGACTCCCAGCAAAGCGCCATGTGGAAGTCGAA
CAAGTTCGGATACGGGACGTTCGGCAGCACCCGCATGTACGAGTCCGGGT
ACGCGACGGTGGAGTCTCAGCAGATCAAGCTCAACCTCTCCGGGTTCAGC
GGTCTTGCGGTCCGCTGCTGCGGAGACGGGAAGCCGTACCGCTTCATCCT
CCGGGACAAGCAGTACGAAGAAACCGGCATCCAGTTTGAGATGACGAAGC
CGAACAAGTGGCAGACGCACCGCCTCCCCTTCTCCGCTTTTGACGCCTAC
CTCTACGGCCAGGTTGTGCAAGCTGAGGCGGGTATGGAAGTGGACCGAGC
ATCGGTGCAGCAGCTGGCGATAGGGTACAAGCGCGAGCCGGTGGACCCGT
TCAACTTCATCCTCTCCATGCACTTCGTCAAGGTG
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