prot_Ecto-sp13_S_contig65110.17311.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65110.17311.1
Unique Nameprot_Ecto-sp13_S_contig65110.17311.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6H5JMX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX8_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.310e-33
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    3 GDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            GDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG
Sbjct:   14 GDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 69          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6B0WES6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0WES6_9CHLR)

HSP 1 Score: 84.3 bits (207), Expect = 1.270e-17
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGE 59
            DR+AL+ALYH TGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L GE
Sbjct:  365 DREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGE 420          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6L7WC15_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7WC15_9CHLR)

HSP 1 Score: 84.3 bits (207), Expect = 1.270e-17
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGE 59
            DR+AL+ALYH TGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L GE
Sbjct:  365 DREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGE 420          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6L8E604_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L8E604_9CHLR)

HSP 1 Score: 80.5 bits (197), Expect = 2.860e-16
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGE 59
            DR+AL+ALYH TGGP+W N + W SD PL  WYGV T+  GRVV LEL  N+L GE
Sbjct:  280 DREALVALYHATGGPAWRNDANWLSDEPLRRWYGVATDPGGRVVRLELSSNDLSGE 335          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6B0XLV3_9BACT (Fibronectin type-III domain-containing protein n=4 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0XLV3_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 6.510e-15
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            DR+AL+ALY  T GP+W N   W S+RP +EWYGVTTNSAGRV  LEL  N L+G
Sbjct:  970 DRNALIALYRATDGPNWTNNENWLSNRPPDEWYGVTTNSAGRVTWLELSDNGLKG 1024          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A7X3WBP1_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WBP1_9BACT)

HSP 1 Score: 75.1 bits (183), Expect = 2.270e-14
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 TGDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            T D++AL+ALYH TGGP+W N   W S++ + +W+GVTTN AGRV  L L  NNL G
Sbjct:  819 TVDKNALIALYHATGGPNWENNEHWLSNQSIGQWFGVTTNDAGRVEQLSLENNNLDG 875          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.310e-14
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            DRDAL+ALY+ T G  W     W +  PL++W+GV  N  GRVVALEL  NNLQG
Sbjct:    5 DRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQG 59          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A6N8ZGC2_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8ZGC2_9CHLR)

HSP 1 Score: 74.3 bits (181), Expect = 4.220e-14
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    2 TGDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALEL 51
            T DR+AL+AL++ TGGP W + + W SDRPL+EWYGVT N+ GRV+AL+L
Sbjct:  217 TADRNALIALFNATGGPDWTDNTNWLSDRPLDEWYGVTANANGRVIALKL 266          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A7X3UT31_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3UT31_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.240e-14
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            DRDAL+ALYH T GP+W N + W SD+P+ +WYGV+T++ GRV  L L  N L G
Sbjct:  680 DRDALVALYHATDGPNWTNNTNWLSDKPIGDWYGVSTDADGRVTWLALELNRLNG 734          
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Match: A0A7X3W7R3_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3W7R3_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.240e-14
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQG 58
            DRDAL+ALYH T GP+W N + W SD+P+ +WYGV+T++ GRV  L L  N L G
Sbjct:  966 DRDALVALYHATDGPNWTNNTNWLSDKPIGDWYGVSTDADGRVTWLALELNRLNG 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65110.17311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMX8_9PHAE1.310e-33100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6B0WES6_9CHLR1.270e-1766.07Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A6L7WC15_9CHLR1.270e-1766.07Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A6L8E604_9CHLR2.860e-1662.50Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A6B0XLV3_9BACT6.510e-1563.64Fibronectin type-III domain-containing protein n=4... [more]
A0A7X3WBP1_9BACT2.270e-1456.14Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A6H5JX36_9PHAE3.310e-1456.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6N8ZGC2_9CHLR4.220e-1462.00Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A7X3UT31_9BACT4.240e-1456.36Uncharacterized protein n=2 Tax=Gemmatimonadetes b... [more]
A0A7X3W7R3_9BACT4.240e-1456.36Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..59
e-value: 6.7E-17
score: 62.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65110contigEcto-sp13_S_contig65110:522..698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65110.17311.1mRNA_Ecto-sp13_S_contig65110.17311.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65110 522..698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65110.17311.1 ID=prot_Ecto-sp13_S_contig65110.17311.1|Name=mRNA_Ecto-sp13_S_contig65110.17311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
RTGDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALE
LRYNNLQGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf