mRNA_Ecto-sp13_S_contig65100.17307.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE) HSP 1 Score: 201 bits (511), Expect = 8.960e-62 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 1
Query: 1 QARATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPEQV 327
QARATAAVRTLSQMEG+DEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANT PRLKAVASLHGILAPI PGTGGE GAGLAADDAALAVPRVLVLHATADPFVPPEQV
Sbjct: 195 QARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTPPRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQV 303
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A813K1V7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K1V7_POLGL) HSP 1 Score: 75.5 bits (184), Expect = 8.430e-14 Identity = 49/105 (46.67%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 7 RATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPE 321
R A+V L+ +EGV+ R+ A+GYCFGG VLDLAR+ AGA A AV S HGIL + G AAD +A PRVL+ H ADPFV PE
Sbjct: 198 RTRASVAALAAVEGVNPHRIGAIGYCFGGRAVLDLARL------GAGAGVA----AVVSFHGIL---------DDGVLPAADMSAATAPRVLICHGDADPFVSPE 283
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A2E3NFS6_9DELT (Carboxymethylenebutenolidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E3NFS6_9DELT) HSP 1 Score: 73.6 bits (179), Expect = 1.630e-13 Identity = 52/112 (46.43%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 1 QARATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPI-LPGTGGEGGAGLAADDAALAV--PRVLVLHATADPFVPPEQV 327
QAR A + + + VDE R+AA+GYCFGGM VLDLARM +AG L VAS HG+L+P LPG A+DA P+VLVLH DP+VPPE +
Sbjct: 95 QARLRAGLEAAAALPEVDETRMAAIGYCFGGMCVLDLARM------NAG------LAGVASFHGLLSPPELPG----------ANDALSGSIEPKVLVLHGWDDPYVPPEAI 184
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A812WEV8_SYMPI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WEV8_SYMPI) HSP 1 Score: 70.1 bits (170), Expect = 2.910e-12 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 7 RATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFV 312
R A+V+ +S++ G+D +R+AA+GYCFGG VLDLAR+ G AG + AV S HGIL + GA D +A PRVLV H ADPFV
Sbjct: 85 RMRASVQAMSEVAGIDPQRIAAIGYCFGGRAVLDLARL----GPAAG------VAAVVSFHGIL---------DDGALPPDDMSAQNAPRVLVCHGDADPFV 167
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A7M2WZA9_9BACT (Dienelactone hydrolase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WZA9_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 9.120e-12 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 7 RATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPEQV 327
R TAA+ TL + + VD +++AA+GYCFGG TVL+LAR +GA+ ++ V S HG L+ LP GE A +VLV H DPFVPP +V
Sbjct: 123 RITAALETLKKQDRVDAKKIAAIGYCFGGTTVLELAR--------SGAD----VQGVVSFHGGLSTTLPAKAGELKA------------KVLVCHGAIDPFVPPAEV 205
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A365ZHU7_9ACTN (Carboxymethylenebutenolidase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A365ZHU7_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 1.370e-11 Identity = 47/96 (48.96%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 40 MEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPEQV 327
+ GVD R+AAVG+CFGG+ VLDLAR AGA L+AVA+ HG+L P PG E G A PRVLVLH DPF PP V
Sbjct: 120 LPGVDRGRVAAVGFCFGGLCVLDLAR--------AGAE----LRAVAAFHGVLTP--PGDMPERRPGPAG-------PRVLVLHGWDDPFAPPADV 194
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A812SUD2_SYMMI (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812SUD2_SYMMI) HSP 1 Score: 68.9 bits (167), Expect = 1.420e-11 Identity = 46/105 (43.81%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 7 RATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPE 321
R A+VR +S++ GVD +R+ A+GYCFGG VLDLAR+ G +G + AV S HGIL + G D +A PRVLV H ADPFV E
Sbjct: 143 RMRASVRAMSEVGGVDPQRIGAIGYCFGGRAVLDLARL----GPGSG------VAAVVSFHGIL---------DDGVVPPEDMSAKDAPRVLVCHGDADPFVTAE 228
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A2V7S7U2_9BACT (Dienelactone hydrolase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7S7U2_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.460e-11 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 4 ARATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPEQVD 330
AR AA+ L + VD R+AA+GYCFGG VLD+AR AGA+ A AV + HG LA P G+ A RVLVL ADPFVPPEQV+
Sbjct: 115 ARFNAALEQLKRDPHVDPRRIAAIGYCFGGAVVLDMAR--------AGADLA----AVVTFHGALATKTPAQPGKVKA------------RVLVLAGDADPFVPPEQVE 199
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A522AXX0_9BACT (Dienelactone hydrolase family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A522AXX0_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.500e-11 Identity = 48/108 (44.44%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 4 ARATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFVPPEQV 327
AR AA+ L Q VD+ ++AA+GYCFGG VL AR AGA+ A AVAS HG L P T G+ RVLVL ADPF+PPEQV
Sbjct: 119 ARFNAALEQLKQDAHVDQRKIAAIGYCFGGSVVLGRAR--------AGADLA----AVASFHGALGTKSPATQGK------------VTARVLVLTGAADPFIPPEQV 202
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Match: A0A812TMG3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TMG3_9DINO) HSP 1 Score: 68.9 bits (167), Expect = 1.690e-11 Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 7 RATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTAPRLKAVASLHGILAPILPGTGGEGGAGLAADDAALAVPRVLVLHATADPFV 312
R A+V+ +S++EGVD +R+ A+GYCFGG VLDLAR+ A + AVAS HGIL + G D + PRVLV H ADPFV
Sbjct: 171 RMRASVQAMSEVEGVDPQRIGAIGYCFGGRAVLDLARL----------GPASGVAAVASFHGIL---------DDGVLPPEDMSDKDAPRVLVCHGDADPFV 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65100.17307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig65100.17307.1 >prot_Ecto-sp13_S_contig65100.17307.1 ID=prot_Ecto-sp13_S_contig65100.17307.1|Name=mRNA_Ecto-sp13_S_contig65100.17307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp QARATAAVRTLSQMEGVDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGAback to top mRNA from alignment at Ecto-sp13_S_contig65100:126..760+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig65100.17307.1 ID=mRNA_Ecto-sp13_S_contig65100.17307.1|Name=mRNA_Ecto-sp13_S_contig65100.17307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=635bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65100:126..760+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig65100:126..760+ >mRNA_Ecto-sp13_S_contig65100.17307.1 ID=mRNA_Ecto-sp13_S_contig65100.17307.1|Name=mRNA_Ecto-sp13_S_contig65100.17307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=330bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65100:126..760+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |