mRNA_Ecto-sp13_S_contig12023.1730.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12023.1730.1
Unique NamemRNA_Ecto-sp13_S_contig12023.1730.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: D8LE28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE28_ECTSI)

HSP 1 Score: 671 bits (1732), Expect = 1.140e-241
Identity = 364/380 (95.79%), Postives = 369/380 (97.11%), Query Frame = 3
Query:   30 MANAKGXXXXXXXXXXXXAKSATDARKSQASGEESLLEKNAVDALLEQARNAGDPFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDMREDSKPSASKATDVVQEGPTEMDCA 1169
            MANAKGXXXXXXXXXXXXAKS    RKSQASGEESLLEK  VDALLEQAR AGDPFLAVTLYQKVL+ARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAG TK+AEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGS+RYDYGGPEPLNAVANLRLSQSRPEEA+QSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDM EDSKPS SKA DVV+EGPTEMDCA
Sbjct:    1 MANAKGXXXXXXXXXXXXAKSTPGERKSQASGEESLLEKGTVDALLEQARKAGDPFLAVTLYQKVLEARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGGTKEAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSIRYDYGGPEPLNAVANLRLSQSRPEEAAQSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDMGEDSKPSTSKAADVVKEGPTEMDCA 380          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A835ZAV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.010e-70
Identity = 157/351 (44.73%), Postives = 203/351 (57.83%), Query Frame = 3
Query:   84 AKSATDARKSQASGEESLLEKNAVDALLEQARNAGDPFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAG------ETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRR----LALCE----------PPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEE--------------FAFEDQVQLVQEQL 1034
            A +A  + +++ASGE++L+             ++ +P LA+  Y++ L   P D +++ EAADL+L  G    AK +L+RSI + P+    K+LYMAQLHEG EAL  Y +GL LL   LA             T  +   LRQ+   A C+VAEL+MTDLCF  DAE  C  ALD ++R+D GGPE   A+A+LRLSQ R  +A   A+EA RR    LA  E          P PD+ FRVS AKVL+EC+  + SC + AL VL+GLMQEDDE+VE W+LM  AF    PPD E ARAHL  AAEML KIR   E M +E              F +E QV LV+EQL
Sbjct:   30 AAAAEQSDEAEASGEDALV------------HDSVEPELALKFYKRALDLCPQDPALLDEAADLLLQLGAADDAKALLSRSIEVAPDASAGKWLYMAQLHEGEEALKLYNRGLTLLEAALAQPAAXXXXXXXXSTLTSIPELRQQLSAACCAVAELYMTDLCFAPDAEAACAAALDRALRHDAGGPEAHQAMAHLRLSQGRAADAVPFAKEAARRVGAALAALEGDVMGGGEGGPGPDYGFRVSAAKVLLECADADASCCEDALAVLAGLMQEDDEDVETWFLMGAAFFKQDPPDLELARAHLERAAEMLEKIR---EHMRKERRSGNRGGGSAQFVFPYEGQVALVREQL 365          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: W7UA25_9STRA (Tpr domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA25_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.920e-55
Identity = 122/317 (38.49%), Postives = 172/317 (54.26%), Query Frame = 3
Query:  192 PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLA-----------------DGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGG-PEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPPPDHE-------------------------FRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQV 1013
            P LAV  Y++ L+A PD T +M    +L+L+ G+   A  +  RS  L P+ G  K+LY+ QL EG ++L H+ KG ELL+++L                  + GG G   +A A + Q     +CS+AEL++TDLCFEEDAE RCQ ALD ++R D GG PE   A ANLRLSQ R +EAS    E  +RL  C+     E                         FR+  AK+L+EC + NK C+ +A++VL     EDDENVE+WYL+ VA++  + PD   A+AHL  A + L K+     D  +  A+ +Q+
Sbjct:   35 PELAVKFYERALEATPDATPVMDALGELLLNTGDGERAYALFERSTKLAPDMGATKWLYLGQLSEGWKSLQHFSKGAELLQEELGARRINPCLKEPDRKEGEEVGGEGMNDEAFAIINQLVST-HCSIAELYLTDLCFEEDAEARCQAALDEALRLDVGGSPEVTQACANLRLSQKRGQEASALMIETVKRLGACQQDDVEEDDEIEGEGGEGAGQEIRGLQLPTIMFRLQTAKLLLECQAYNKKCAKEAVRVLEACKCEDDENVEVWYLLGVAYSRQRKPDVGMAKAHLLHAQQALRKMEQMDGDAEKADAYGEQL 350          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A7S2CWS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWS8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.250e-54
Identity = 127/323 (39.32%), Postives = 181/323 (56.04%), Query Frame = 3
Query:  162 LLEQARNAGD---PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPD----KYLYMAQLHEGREALGHYEKGLELL--RKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYG-GPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQL---EATALLESKDDCEKDEDTD 1091
            L+++A+ A D   P LAV   ++  +A P+D SI+ + A++ +  GE   A     R+I +      D    ++LY+AQL EG  A   YE GL LL  R Q        E   +E+ +R + C AYC+VAEL++TDLC EE AE  CQ+AL+ +M ++     EP+  +A+LRLSQ    EA+     A+ R+  C    D E R+S A++L+EC+     C+D AL +L    +EDDENVE+W+LM V F    PPD   A  +L  A EML K+R A     E F +E Q++LV EQ+   EA AL    D  E D++TD
Sbjct:   28 LMDRAQKAIDVCEPELAVRFMRRASEAAPEDASILDQLAEVEMGVGETERAGRAWMRAIEVSGNPDHDANAERWLYVAQLREGNGARESYEHGLRLLTARLQAMQASMVHEEGSSESDIRAQMCTAYCAVAELYLTDLCLEESAEEACQNALNKAMEFNANESHEPMQGLASLRLSQGMHAEAANLMHSAYERIKSCGHAMDPELRISTARLLLECAPNVSQCADDALDLLMDSKREDDENVEIWFLMGVGFYQQSPPDLTLAYEYLERAKEMLEKVREALLQENEPFPYEVQLRLVGEQMKLVEAAALEYPPDSNEGDDNTD 350          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A1V9Z8H4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8H4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.480e-50
Identity = 115/316 (36.39%), Postives = 179/316 (56.65%), Query Frame = 3
Query:  159 ALLEQARNAGD---PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPP--PDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTD 1091
            ALL +A    D   P LA+  +QK     P+++ I+    +L     +P  A +   RSI L P+  P KYLY AQL +G E+  +  +G+ ++++ +    G   T +++  LR++ C AYCS+ EL+M+DLC  +DAE +C+  L  +M+YD G PEP  A+ANLRL+Q R +EA    +E ++RL+ C+    P  EFR    K+L+E     ++C      VL G+MQEDDEN ELWYL+   + +L+  D +SA   L    +ML+KI+   +DMG +F  + Q+  V+  + +   +E  D   +D D D
Sbjct:   11 ALLAKAEELVDQCQPELAIKFFQKAAALEPNNSEILDAIGELATEIDDPETALQAFHRSIELAPKSNPGKYLYAAQLLQGEESEQYTLQGINIMKELMPALPGIESTDESKL-LRKQVCDAYCSLGELYMSDLCDADDAEAKCEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDEACVCLDETYKRLSACDENTMPSLEFRTFTGKLLIEVEKYEQACD-----VLEGVMQEDDENAELWYLVGSCYKALE--DYDSALEFLERCEKMLAKIK---KDMGADFHLDAQLDDVRAMIASINEIEPIDAETEDHDMD 315          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A1W0ABN5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABN5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.190e-48
Identity = 112/321 (34.89%), Postives = 177/321 (55.14%), Query Frame = 3
Query:  144 KNAVDALLEQARNAGD---PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPP--PDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTD 1091
            K    ALL +     D   P LA+  +QK     P+ + I     +L    G+P  A +   RSI L P+  P K+LY AQL +G E+  +  +G+  +++ +    G   T +++  LR++ C AYCS+ EL+M+DLC  +DAE +C+  L  +M+YD G PEP  A+ANLRL+Q R ++A    +E ++RL  C+    P  EFR    K+L+E     ++C      VL G+MQEDDEN ELW+L+   + +L+  D +SA   L     MLSK++   ++MG EF  + Q+  V+  + +   +E  +  ++D+D D
Sbjct:    6 KVTAQALLAKGEELVDQCQPELAIKFFQKAAAMEPNRSEIFDAIGELATEIGDPDTAAQAFGRSIELAPKSNPGKWLYFAQLVQGEESEKYTLQGIAYMKELMPAMPGIENTDESKL-LRKQICDAYCSLGELYMSDLCDLDDAEAKCEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDDACACLDETYKRLGQCDENTMPSLEFRTFTGKMLIEVEKFEQACD-----VLEGVMQEDDENPELWFLVGTCYKALE--DYDSALEFLERCESMLSKLK---KEMGNEFHLDVQLDEVRALIASINEIEPIEQADEDQDMD 315          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A024UWZ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWZ5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 7.160e-48
Identity = 114/317 (35.96%), Postives = 176/317 (55.52%), Query Frame = 3
Query:  162 LLEQARNAGD---PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLAD-GGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPP--PDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDM 1094
            LLE+A    D   P LA+  +QK     P+++ I     +L    G+P  A +   +SI + P+  P KYLY AQL +G E+     +G+ ++ + LA+      E+K     L+++ C AYCS+ EL+M+DLC  +DAE +C+  L  +++YD G P+   A+AN RL Q R EEA +  +E  +RL  C+    P  EFR+   K+L+E         ++A  VL G+MQEDDEN ELW+L+   +N+L+  D ++A   L     ML+K+   Q+D+G+EF    Q+  VQ  +E+   +E   D +  ED DM
Sbjct:   17 LLERAETLVDQLQPELAIKFFQKASALEPNNSEIYDAIGELATEIGDPQTALDAFLKSIQVAPKHNPGKYLYAAQLVQGEESEKFALQGIAIMTELLANVPAHLDESKL----LKKQICDAYCSLTELYMSDLCDADDAEAKCEHYLQEALKYDLGLPDATQAMANFRLVQQRKEEAIEYLDETVKRLNACDEHTMPSLEFRIVTGKLLVEVEKY-----EQAAYVLEGVMQEDDENAELWFLVGSCYNALE--DYDTALEFLERCEAMLTKL---QKDLGDEFQLHQQLDTVQSLIESIKQIEPVGDADDAEDHDM 319          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A2D4BGB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGB7_PYTIN)

HSP 1 Score: 174 bits (441), Expect = 3.310e-47
Identity = 106/296 (35.81%), Postives = 173/296 (58.45%), Query Frame = 3
Query:  156 DALLEQARNAGDPFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLAL-CEP--PPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQL 1034
            ++L++Q +    P LAV  ++K L   P +T ++    +L      P  A  V  +SI L P + P K+LY+AQL  G +A+ +  +G+  L+++L   G A E+++A+  ++++ C AYCS+ EL+MTDLC E+DAE RC++    ++++D G PEP  A+ANLRL+Q R +EA    EE +RRLA  C+    P  EFR+   K+L+E     ++C      VL G+MQEDDEN ELW+L+   + ++   D   +        EML K++   +++ +EF  + Q++ V E +
Sbjct:   22 ESLVDQCQ----PELAVKFFEKALLKEPTNTMLLDTIGELSTELDNPERALAVFQQSIQLAPAQNPSKWLYLAQLVGGEDAVKYTTQGITYLQQELQ--GVAAESQEAQV-IKKQICXAYCSLGELYMTDLCDEDDAEARCENYFQSALQFDIGTPEPTQALANLRLTQQRRDEAVPLLEETYRRLAENCDENSTPSLEFRIFTGKLLIEVEKYEEACD-----VLEGVMQEDDENAELWFLVGTCYRAMD--DLSLSLEFFQKCEEMLQKLK---KELRDEFHLDAQLESVTETI 300          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: A0A7R9UBQ8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBQ8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 5.330e-47
Identity = 121/337 (35.91%), Postives = 183/337 (54.30%), Query Frame = 3
Query:  168 EQARNAGDPFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRL----------------------ALCEPP--PDHEFRVSLAKVLMECSS-----------VNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCE 1073
            E A ++ +P LA+  +Q+ L+ + D  + +  AA  ML  G+   A+ +L R   L PE  P ++L +AQL EG +AL  Y K + LL  +L    GA + +     +R++ C A  SVAEL+MTDLC E+ AE  C+ +L  + ++D G PE   A+A+LRLSQ+R +EA+  A EA  R                       A  + P  P+ E R+SL K+L+EC+S           +   C+++A +V+ G ++ED++NVE W+L+  A   + PPD   AR     A +ML KIR A  ++GE+F +E+Q   VQ Q    ALL S+ D E
Sbjct:   20 ENAMHSAEPELALRFFQRALEQQSDHEAALDGAAGAMLSLGDADGARALLRRGCELRPESSPLRWLDLAQLLEGADALAAYSKAVSLLMGRLQ---GAADAQT----VRKQICSAKVSVAELYMTDLCTEKGAEEACERSLREAQQFDEGAPELPQALASLRLSQNRQQEAALLALEASERTQKLIREVAGATTALAALQAGEDAQADVPVGPELELRISLTKILIECASQAVIEEGGHGGLCGKCAERAAEVIHGCLEEDEDNVEQWFLLGCAAQLMVPPDLTVARDAFRQAQQMLGKIRDAFAELGEDFPYEEQEAAVQRQQ---ALLPSQGDGE 346          
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Match: W4GVT1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVT1_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.100e-46
Identity = 111/316 (35.13%), Postives = 172/316 (54.43%), Query Frame = 3
Query:  162 LLEQARNAGD---PFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEPLNAVANLRLSQSRPEEASQSAEEAFRRLALCEPP--PDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKDEDTDM 1094
            LLE+A    D   P LA+  +QK     P+++ I     +L    G+P  A +   +SI + P+  P KYLY AQL +G E+     +G+E +   LA      +       L+++ C AYCS+ EL+M+DLC   DAE +C+  L  ++++D G P+   A+AN RL Q R +EA    +E  +RL  C+    P  EFR+   K+L+E         ++A  VL G+MQEDDEN E+W+L+   +N+L+  D ++A   L     MLSK+   Q+DMG+EF  + Q+  V+  +E+   +E   D + D+D DM
Sbjct:   17 LLERAETLVDQLQPELAIKFFQKAAALEPNNSEIYDAIGELATEIGDPHTALQAFLKSIDVAPKHNPGKYLYAAQLVQGEESEKFALQGIEHMSASLAH---VPDHLDESKLLKKQICDAYCSLGELYMSDLCDAHDAEAKCEHYLQEALKFDLGLPDATQAMANFRLVQQRTDEAIAFLDETLKRLNACDEHTMPSLEFRIVTGKLLVEVEKF-----EQAAYVLEGVMQEDDENAEVWFLVGSCYNALE--DYDTALEFLERCDAMLSKL---QKDMGDEFELDQQLDTVRSLIESIKQIEPVGDDDGDKDQDM 319          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12023.1730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE28_ECTSI1.140e-24195.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAV8_9STRA2.010e-7044.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7UA25_9STRA3.920e-5538.49Tpr domain protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2CWS8_9STRA3.250e-5439.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9Z8H4_9STRA5.480e-5036.39Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1W0ABN5_9STRA3.190e-4834.89Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A024UWZ5_9STRA7.160e-4835.96Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4BGB7_PYTIN3.310e-4735.81Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7R9UBQ8_9STRA5.330e-4735.91Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W4GVT1_9STRA2.100e-4635.13Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12023contigEcto-sp13_S_contig12023:1316..5108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score681.0
Seed ortholog evalue3.2e-193
Seed eggNOG ortholog2880.D8LE28
Model size1267
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698
Exons8
EggNOG free text desc.ribosome biogenesis
EggNOG OGs28JWA@1,2QSAH@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-05_004280.1
Cds size1143
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12023.1730.1prot_Ecto-sp13_S_contig12023.1730.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12023 1345..5013 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462638.6210124-UTR-Ecto-sp13_S_contig12023:1315..13441681462638.6210124-UTR-Ecto-sp13_S_contig12023:1315..1344Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12023 1316..1344 +
1681462638.7139158-UTR-Ecto-sp13_S_contig12023:5013..51081681462638.7139158-UTR-Ecto-sp13_S_contig12023:5013..5108Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12023 5014..5108 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462638.6334796-CDS-Ecto-sp13_S_contig12023:1344..14441681462638.6334796-CDS-Ecto-sp13_S_contig12023:1344..1444Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 1345..1444 +
1681462638.645054-CDS-Ecto-sp13_S_contig12023:1591..17731681462638.645054-CDS-Ecto-sp13_S_contig12023:1591..1773Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 1592..1773 +
1681462638.652859-CDS-Ecto-sp13_S_contig12023:2372..26421681462638.652859-CDS-Ecto-sp13_S_contig12023:2372..2642Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 2373..2642 +
1681462638.6609974-CDS-Ecto-sp13_S_contig12023:3078..32201681462638.6609974-CDS-Ecto-sp13_S_contig12023:3078..3220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 3079..3220 +
1681462638.6719213-CDS-Ecto-sp13_S_contig12023:3681..37671681462638.6719213-CDS-Ecto-sp13_S_contig12023:3681..3767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 3682..3767 +
1681462638.683374-CDS-Ecto-sp13_S_contig12023:4066..41791681462638.683374-CDS-Ecto-sp13_S_contig12023:4066..4179Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 4067..4179 +
1681462638.6936672-CDS-Ecto-sp13_S_contig12023:4624..47121681462638.6936672-CDS-Ecto-sp13_S_contig12023:4624..4712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 4625..4712 +
1681462638.703273-CDS-Ecto-sp13_S_contig12023:4851..50131681462638.703273-CDS-Ecto-sp13_S_contig12023:4851..5013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12023 4852..5013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12023.1730.1

>prot_Ecto-sp13_S_contig12023.1730.1 ID=prot_Ecto-sp13_S_contig12023.1730.1|Name=mRNA_Ecto-sp13_S_contig12023.1730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=381bp
MANAKGKGKGKKGKGKGRAKSATDARKSQASGEESLLEKNAVDALLEQAR
NAGDPFLAVTLYQKVLQARPDDTSIMGEAADLMLHAGEPAAAKEVLARSI
LLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGETKQA
EAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSMRYDYGGPEP
LNAVANLRLSQSRPEEASQSAEEAFRRLALCEPPPDHEFRVSLAKVLMEC
SSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAH
LNTAAEMLSKIRTAQEDMGEEFAFEDQVQLVQEQLEATALLESKDDCEKD
EDTDMREDSKPSASKATDVVQEGPTEMDCA*
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mRNA from alignment at Ecto-sp13_S_contig12023:1316..5108+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12023.1730.1 ID=mRNA_Ecto-sp13_S_contig12023.1730.1|Name=mRNA_Ecto-sp13_S_contig12023.1730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3793bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12023:1316..5108+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTGTACCTCGCTTCCCGTAGCTGAGAGATGGCCAACGCAAAGGGAAAA GGCAAAGGAAAGAAAGGGAAGGGAAAAGGTCGGGCGAAGTCAGCAACTGA TGCAAGGAAATCTCAAGCTTCGGGTGAAGGTACGACCCATTTACTCCCTG CGATATATATGGCTGCCAACACTCATCCTCCCCGAGAGATTGCGCAACGT ACGAGCCCTCCACCCTGACCACCTGGCGTTCTTGCTACGTCTCCCTACCT GCTCGCCTCGGCTTCGTGATTTCAAGAATCATTGCTGGAGAAGAACGCCG TCGATGCGCTGTTGGAACAGGCTCGCAACGCGGGAGATCCCTTTCTCGCC GTAACCTTGTACCAAAAGGTCCTGCAAGCGAGGCCTGATGACACCAGTAT CATGGGCGAGGCAGCGGACCTAATGCTACACGCGGGGGAGCCGGCAGCGG CAAAGGAGGTACGTCCAACCCCACATACAACGCGTGTTGTGGCTACATAC CTTGAACGACAGCGGTAAAGTTCTGCTGTTTCGGTGAGAGACAGTGACAG AGCAGGTAGACGCGTACCGTTGGTGACACCAGATACCACACCCCCTGAAC CGATTTTCAAAGCTCGATTACTCCACGAAGGAGAGGATGCACAAATCATG TGACACGTTTTCGGAAAGTTCTCGAAGAGATAGTTTCAACAACACCCCCA TTTTCGGCATCGCTGCTCTTTTTCTCTGGAGTATTCAAGCGTTGAACATC GGTCTGGGGAGTGCGGTGCCTTATGTCACCTTACGGTGTAAGTCATGTCA CCACCTCTCTTGTGTGCACTTCTGCCCGCGAATGTATCATGCTGAATACA TCCCCACCAGCCAGCGCACTGGTGCTGTACATTCCTGCGATACAACTATG TAGGAATCAATGAATAACATCCCTCTCAGAGATGTTTTGCATCAACGAGG GATGACAACGGTCTGCGAATCATTTAGCATCCTCGTGAGATTGGACGACT TTCCAAGACAAAAATCAAGAGGCTTTGGGTCCCGCCTGTGCACCCCCCGC GCACCAGGTGTTGGCTCGAAGTATCTTGCTGGGGCCGGAGGAAGGGCCAG ATAAGTACCTTTACATGGCCCAGCTGCATGAGGGCCGAGAGGCCTTGGGG CACTACGAGAAGGGGCTGGAGTTGTTGCGAAAGCAACTCGCCGACGGCGG TGGTGCTGGCGAGACTAAGCAGGCCGAAGCAGCACTGCGACAGCGAGCTT GCATGGCATACTGCAGCGTGGCGGAACTCTTCATGACCGATCTTTGTTTC GAAGAAGACGCAGAAACCCGCTGTCAGGTGAGAGCACAGAGAGCGGGAGT CAAGCAGAAGTACGGCTTCACATGGCCATCCGCGTCACTGACGCGTCGTA TCCCCCCAAGAGATTGTCTCATTGGCACCCTGACCCTGGGATCCACCAGC TTGCTCACAGCCCCTCTGATTCGCCGACTTTGTTGTGTTTATCAATGTGA TGGGCAGCTTTGTGTTGGTGAAGATAAGTGAACCGCGAGAGTCGCGTCAG CCTTCAGGCCCTCATGCTGCTGTTGCTACTGAAGCGTACCACAAGTTTTT CGAGTCTCGTGTGCAGCAACAGGAGGCGCCTCGATAGGCCGAGACTGCTA CAGGTGCTGGATCGTGGAATCGAACGTAGTCAAAGATCGACTGATCTGAT GAAGCTTTGGTGGCCCTGTGGCCATTCCGCGATACATATTCTCGGCTGGC TGTCACCTTCCAGGATGCTCTAGATGGGAGCATGAGATACGACTACGGTG GACCCGAGCCGCTGAATGCCGTGGCAAATCTTCGCCTCAGCCAAAGCAGG CCCGAGGAAGCTTCCCAGTCGGCAGAGGAGGCTTTTCGACGACTCGCTCT TTGCGGTGGGTGCACTTTTTTCTTAGCGTCGAGAGTTGAAGCCCGCCCCG AAATCGAGGATATGACTCCCTCCGCATTCTTGAGTGCATTTTTGCCATAT CTGTACCCGTACTTGCATCGGCAACGTGCGGCTGAACATGCCTCACGACT TGTCATTGAGTTTCGTTGGCCCTGATCGTTGTTGCACGAGTGATTGCGTG TACAAGCTTTGGCCATATGCATGTTTTCACAGAAGACTGGACTGTACGCA GGCACCTGCTTACCTCGTCCTATGTTCATTTTTTGCCGTCGGGCGCAATA CACGAAGTACATGTGTTCTATTAGTTTGAAGCTTTCGACGGCAGGTGATT GTCAGCTTGATGTTACAGACTGGTCATGAGATACGGGAAATAATGAGACA CCCCGTCTGGTTGTCTGACTTGGCTGTCCGACGCTTTCAACTTTGGACCA TACGCGGTGCCCTCAGAGCCTCCTCCAGACCATGAATTCCGTGTCTCGCT GGCGAAAGTCCTGATGGAGTGTTCTTCCGTCAACAAGTCATGCTCTGACA AGGTCAGTATGGGACTGTACGCTCCCTCTCGCTGCAGTGGTTGCGTTAAA GAGGTTGAGGGCCCTGAGTAAGCGACGTAGTCCGTTCGAGAATGCAGTCT GTTTTCGGGGGTAGCAGTCGCTCTGACGGTTGGAATTCGACGCAAGACAG ACCTCGTTCGGGAGAGCAAACGTACCCCACAGCAAGCGTAACTTACTGCG AGGAAGAGGCGGCAGCGAAGAATGCAACTCTCCGTGGGTGACGCGCGGTT CGCCCGTTTTTTGCGCTACTGTCGTGCGTGTTGGGTGCACATCGACTATA GGCTCTGCAGGTGTTGAGTGGGCTGATGCAGGAGGATGACGAAAACGTCG AGCTGTGGTATCTCATGGCGGTTGCCTTCAACAGCTTGCAACCTCCGGAC TGCGAGAGTGCCAGGTGAGTGAGGGCATGTGCTTATCACCACTCTCGGGC AGTCTGTGGCCTTTCATTTGCCCCACAGCTGCTTGCAGGCACGGTTTGTT GAACCGTCTTTTCGGCGTACTGAGCATTCTCGCTATATGGAGTGATGGTC GCTACATCACGTCCCTCCGTTTTTGACGTCGATCGCGCAGAAAGCAACCG TATCTTCAAGGTTAACCAACAAGACCAATAAAGTGCTTGGGTGTGTGTTT GTTGCTCTATAGGACACATGCGTTGTGCTGGCCGACGGCTATTTCGATTC CGAGGTGTGGTACGTTCTGCACTGCGTACAACGAGCTGCACAGTGCGTGC CACACTCCACATGAGGATGCGTCCTTGCTTGCTGGAAGCTAAAATAAATG GAGTACATCATCCCCAATGCGGTGCTTTTGTTGTGCCTGTGCTTTTGTTT CGAGCGTAGGGCCCATTTGAATACGGCAGCGGAGATGCTCTCTAAGATTC GAACAGCGCAAGAGGATATGGGCGAGGAGTTTGCCTTCGAGGATCAGGTG CGGATGTTTTTGGTGTGACGTTTCACCGATCTGTTTGTGTTGCCGTCCTT TTGAAAAACATGGCTTGTCCGAACTCGGAACACTTTTGTCACACTGCCCC CCCGGATTCCGGTTCTTTGGCCTTTGGCTCTAATAGGTGCAACTGGTTCA AGAGCAGCTGGAAGCGACGGCTCTCTTGGAAAGCAAAGATGACTGTGAAA AGGACGAAGATACAGATATGAGAGAGGACAGCAAGCCCAGTGCGTCCAAG GCTACCGATGTTGTACAAGAAGGACCAACGGAGATGGACTGCGCATGAAC ACGTCGGGCACACTTATTGCATGAGCCAGACTGCTGCTGTAGCTGCCTCT AAATTTTTCCTTTGAGCCGTAGACGCCTTCACGTCAAACCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12023:1316..5108+

>mRNA_Ecto-sp13_S_contig12023.1730.1 ID=mRNA_Ecto-sp13_S_contig12023.1730.1|Name=mRNA_Ecto-sp13_S_contig12023.1730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12023:1316..5108+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCAACGCAAAGGGAAAAGGCAAAGGAAAGAAAGGGAAGGGAAAAGG
TCGGGCGAAGTCAGCAACTGATGCAAGGAAATCTCAAGCTTCGGGTGAAG
AATCATTGCTGGAGAAGAACGCCGTCGATGCGCTGTTGGAACAGGCTCGC
AACGCGGGAGATCCCTTTCTCGCCGTAACCTTGTACCAAAAGGTCCTGCA
AGCGAGGCCTGATGACACCAGTATCATGGGCGAGGCAGCGGACCTAATGC
TACACGCGGGGGAGCCGGCAGCGGCAAAGGAGGTGTTGGCTCGAAGTATC
TTGCTGGGGCCGGAGGAAGGGCCAGATAAGTACCTTTACATGGCCCAGCT
GCATGAGGGCCGAGAGGCCTTGGGGCACTACGAGAAGGGGCTGGAGTTGT
TGCGAAAGCAACTCGCCGACGGCGGTGGTGCTGGCGAGACTAAGCAGGCC
GAAGCAGCACTGCGACAGCGAGCTTGCATGGCATACTGCAGCGTGGCGGA
ACTCTTCATGACCGATCTTTGTTTCGAAGAAGACGCAGAAACCCGCTGTC
AGGATGCTCTAGATGGGAGCATGAGATACGACTACGGTGGACCCGAGCCG
CTGAATGCCGTGGCAAATCTTCGCCTCAGCCAAAGCAGGCCCGAGGAAGC
TTCCCAGTCGGCAGAGGAGGCTTTTCGACGACTCGCTCTTTGCGAGCCTC
CTCCAGACCATGAATTCCGTGTCTCGCTGGCGAAAGTCCTGATGGAGTGT
TCTTCCGTCAACAAGTCATGCTCTGACAAGGCTCTGCAGGTGTTGAGTGG
GCTGATGCAGGAGGATGACGAAAACGTCGAGCTGTGGTATCTCATGGCGG
TTGCCTTCAACAGCTTGCAACCTCCGGACTGCGAGAGTGCCAGGGCCCAT
TTGAATACGGCAGCGGAGATGCTCTCTAAGATTCGAACAGCGCAAGAGGA
TATGGGCGAGGAGTTTGCCTTCGAGGATCAGGTGCAACTGGTTCAAGAGC
AGCTGGAAGCGACGGCTCTCTTGGAAAGCAAAGATGACTGTGAAAAGGAC
GAAGATACAGATATGAGAGAGGACAGCAAGCCCAGTGCGTCCAAGGCTAC
CGATGTTGTACAAGAAGGACCAACGGAGATGGACTGCGCATGA
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