mRNA_Ecto-sp13_S_contig6505.17300.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig6505.17300.1
Unique Name	mRNA_Ecto-sp13_S_contig6505.17300.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: A0A6H5L9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R2_9PHAE)

HSP 1 Score: 500 bits (1287), Expect = 3.260e-161
Identity = 304/338 (89.94%), Postives = 312/338 (92.31%), Query Frame = 2

Query:    5 MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLEDTGAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQNLRMPSTDATAAGAATPDAAAAGAVVAALDRVYKALCAYAIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEIAELY 1018
            MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNL+D+GAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQN RMPSTDA A GAA P     GAVVAALD VYKALCAY+IAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALHEAL LLEA CS VRSAW+RWQERG ASVK VVKKRFFPVLVAVALSLLLVLPAYW IPRGG  GNDDG ERLS RQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALK  EQSAYEYLSHFA+GLR+DVHE+  L+
Sbjct:    1 MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLQDSGAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQNPRMPSTDAAAVGAAAPXXXXXGAVVAALDLVYKALCAYSIAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALHEALGLLEAMCSWVRSAWRRWQERGLASVKRVVKKRFFPVLVAVALSLLLVLPAYWTIPRGGDGGNDDGPERLSVRQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKFVEQSAYEYLSHFADGLRQDVHEVKGLF 338

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BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: D7FYG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG5_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 5.010e-115
Identity = 223/328 (67.99%), Postives = 239/328 (72.87%), Query Frame = 2

Query: 1166 KPDGGMKEERGVGDDERTLRAALREQYADRLDGGKEGGGVGGGERSSGGISTNRSGKHDGMTEERGGDGKRGLRAALREKVAMQRAASLKQTTDRQDGGRRAPHVDGTPSQDQGERKITEEPRDEVRTFDAEYWRTIKAGPERGVRFDRSGRRVVQKRGWVRYYSNAVRTGTAVRLDMTEELEPSPRKKMKAALTPSTRNHEPEETLSLENSGRSGEVRSGDKDAEESAKLSTGRQAVEDAEAVGLDDNLEDYYQAGVANLRSCKNEATDFIESRSIHCRSGGFGLSSVDQKPKNAKPKGHMAIQDGEELRADKSDGVEVENRSKKGC 2149
            K DG MKEERG  DDE  LRAALREQYA+R  GGKE                   GKH GMTEERGGDG RGLRAA+REK+A QRAA+L+QTTDRQD GRRAPHVDGTP Q QGERK TEEPRDEVRTFDAE WRTIKAGPERGVRFDRSG RVVQKRGWVRYY NA+RTGTAVRL  TEELEPSPR+  KAA                            DKDAE SAKLSTGRQAVEDAEA GLDDNL++YYQ  +A L+S + EAT++ E +SIH RS G  LS  DQKPKNAKPKGHMAIQ GEEL   KSDGV+VE RSKKGC
Sbjct:  181 KCDGSMKEERGGRDDETALRAALREQYAERFHGGKEXXXXXXXXXXXXXXXXXDFGKHGGMTEERGGDGNRGLRAAVREKIAKQRAAALEQTTDRQDDGRRAPHVDGTPPQVQGERKTTEEPRDEVRTFDAEQWRTIKAGPERGVRFDRSGTRVVQKRGWVRYYGNAIRTGTAVRLGTTEELEPSPRQNTKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKDAEGSAKLSTGRQAVEDAEAAGLDDNLKEYYQVVLAKLKSSRKEATEYKELKSIHGRSSGVELSRADQKPKNAKPKGHMAIQGGEELTTGKSDGVDVEKRSKKGC 508

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BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: D7FYG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG6_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 3.570e-101
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 2

Query:  461 ALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEI 1006
            ALHEAL LLEA CS VRSAWQRWQERGPASVK VVKKRFFPVLVAVALSLLLVLPAYWAIPRGGG GNDDG ERLSARQWQA+YDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHE+
Sbjct:   13 ALHEALGLLEAACSWVRSAWQRWQERGPASVKRVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGG-GNDDGPERLSARQWQAEYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEV 193

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L9R2_9PHAE	3.260e-161	89.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYG5_ECTSI	5.010e-115	67.99	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FYG6_ECTSI	3.570e-101	95.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6505	contig	Ecto-sp13_S_contig6505:105..7896 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4590
Hectar predicted targeting category	other localisation
Exons	6
Cds size	2400

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6505.17300.1	prot_Ecto-sp13_S_contig6505.17300.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig6505 109..5710 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463897.299283-UTR-Ecto-sp13_S_contig6505:104..108	1681463897.299283-UTR-Ecto-sp13_S_contig6505:104..108	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6505 105..108 +
1681463897.3767588-UTR-Ecto-sp13_S_contig6505:5710..7896	1681463897.3767588-UTR-Ecto-sp13_S_contig6505:5710..7896	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6505 5711..7896 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463897.3101795-CDS-Ecto-sp13_S_contig6505:108..278	1681463897.3101795-CDS-Ecto-sp13_S_contig6505:108..278	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 109..278 +
1681463897.3207362-CDS-Ecto-sp13_S_contig6505:1425..1954	1681463897.3207362-CDS-Ecto-sp13_S_contig6505:1425..1954	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 1426..1954 +
1681463897.3313298-CDS-Ecto-sp13_S_contig6505:2231..2399	1681463897.3313298-CDS-Ecto-sp13_S_contig6505:2231..2399	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 2232..2399 +
1681463897.3436067-CDS-Ecto-sp13_S_contig6505:2959..3091	1681463897.3436067-CDS-Ecto-sp13_S_contig6505:2959..3091	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 2960..3091 +
1681463897.3534741-CDS-Ecto-sp13_S_contig6505:4272..5501	1681463897.3534741-CDS-Ecto-sp13_S_contig6505:4272..5501	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 4273..5501 +
1681463897.3627708-CDS-Ecto-sp13_S_contig6505:5538..5710	1681463897.3627708-CDS-Ecto-sp13_S_contig6505:5538..5710	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6505 5539..5710 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig6505:105..7896+
coding sequence from alignment at Ecto-sp13_S_contig6505:105..7896+

protein sequence of mRNA_Ecto-sp13_S_contig6505.17300.1

>prot_Ecto-sp13_S_contig6505.17300.1 ID=prot_Ecto-sp13_S_contig6505.17300.1|Name=mRNA_Ecto-sp13_S_contig6505.17300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=800bp
MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLEDTGAEPAGQDAAPFSP
GAFPALGASLSAGVAFAPPSSTTQQSQNLRMPSTDATAAGAATPDAAAAG
AVVAALDRVYKALCAYAIAGYKFLHAHGAVAYNFVYTHAAMAFEFVYAYA
AVALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVAL
SLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQ
RLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSES
VLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEIAELYVGMMFKEVGGGE
HSSGGSSNNRFDDKSDGIIKEGGGVGGGESSSGGSSAKPDGGMKEERGVG
DDERTLRAALREQYADRLDGGKEGGGVGGGERSSGGISTNRSGKHDGMTE
ERGGDGKRGLRAALREKVAMQRAASLKQTTDRQDGGRRAPHVDGTPSQDQ
GERKITEEPRDEVRTFDAEYWRTIKAGPERGVRFDRSGRRVVQKRGWVRY
YSNAVRTGTAVRLDMTEELEPSPRKKMKAALTPSTRNHEPEETLSLENSG
RSGEVRSGDKDAEESAKLSTGRQAVEDAEAVGLDDNLEDYYQAGVANLRS
CKNEATDFIESRSIHCRSGGFGLSSVDQKPKNAKPKGHMAIQDGEELRAD
KSDGVEVENRSKKGCKKVKSKDRSKDKPKDKSKHKLKDKSKDNRRTSRRT
SRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRASRRAS*

mRNA from alignment at Ecto-sp13_S_contig6505:105..7896+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig6505.17300.1 ID=mRNA_Ecto-sp13_S_contig6505.17300.1|Name=mRNA_Ecto-sp13_S_contig6505.17300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6505:105..7896+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGACATGGGAGGAGAGAGGACTCAAAGCGGTACAGGTGATACTCGCGCCA
TCCCCCAGGGAGAAGAGGAATTCGTAGTAGTCGATGATGACGGGTTGAAC
CTGGAGGACACCGGGGCGGAGCCCGCAGGACAGGATGCTGCACCTTTTTC
GCCGGGAGCGTTTCCAGCTCTAGGGTAGGTCTTGATGTTTGGGCCACCCC
TGTTACTTGACGGAGGGGAGAAGTCATTCGAAACTCGACTTTCATTATTT
TGTTCCTTCCCCCGACCGCACTTCAACAGCAGTTCAACTCAGATCCTCAA
CTTTTTTCGGAGAGACACAAGCAACCCTTCCCGCTGACACACTTCTTGGG
TGCGGCTTCACCATAGAGAGCTAGCTCTGATACCCCCCCCCCACTCGCTT
TCTTCGTGCTTGTTCAGCTCGCTGTTTGGATCACGGCTCTTTAGCAGCCG
CCCGGTGCGTCAACATTTCTTCCTCGGATGAATGTTGCTACGGTATCGTT
CTGTAGGCATAGAATGTGTACCTGGAGACAGTTTCTCCGCGGCGAAATCT
ATAAATATTTACCAGTATCTATACGGCAGAATGGACAAGTAGGTATCCGA
AGGAAGCGATACCACCACAGAGGTAGAGGGAGGCAGGAGGTAGAGCGAGA
GAGACACTGGAGGTAGAGCGAGAGAGAGGGCGCGCGCGAGAGAGAGAAGA
GAGAGAGACGGAGCGTTGGTCTTGGCTTAAGTTTTTTGCAGTGCGTATCG
GAGGGAACGGCAATGCCACCCTCTGCTGATAGGCGTATCTTACATGATTC
GCACGCGATGCACTGGAGCGACACCAATTTTTAGATTATTTTTATTTTGT
GTCAACAGAGAAACGAGCAGGCTGTATCAGCGCAGCAGCGAATCATGCGT
GGGCGTGGCGTGTCCGGATTTCAAACCTGTCTTGTTGAGCATGTTACCCA
GGGGAGATATCGCTCTCTGCGGGCTGCTCAGGGAGCCGGAGAACTGCAAG
TTGGTCACACCGTACAACGCTATGGATTCATTGCGAATTTACCGCAGACT
CTTTTCTGTGGCAGAGATGGCGTTTATCCAGATGAATTCGTTTTGTTTTT
GTCAGAAAAGAGAAAATGGCCGTATGGCCGTATCGCCGTACGACGGGAGC
CCTCCCGTCTCAACCAGACTAAATAAAAATCCTCCGTCGTACGCGTTGTG
GGCAGAAACGCAACAACAACGGGCGGACGTGAACCGCGGTACCTACGCAA
ACCTGAATTGCCCGCATAATCAAATAAAGCCCTTTGCCCCCACCGCCGCT
GCGCGTACAATTTTCTGACAGTGCCAGTCTCTCCGCCGGCGTGGCCTTCG
CGCCTCCATCGTCTACGACGCAGCAGAGCCAAAACCTTCGCATGCCTTCA
ACGGACGCCACCGCCGCCGGTGCTGCCACCCCTGACGCCGCAGCAGCAGG
CGCCGTGGTGGCGGCGTTGGACCGAGTCTACAAGGCCCTGTGCGCCTACG
CCATCGCGGGGTACAAATTTCTCCACGCTCACGGTGCCGTGGCGTACAAC
TTCGTCTACACCCACGCGGCCATGGCCTTCGAGTTCGTCTACGCCTACGC
AGCGGTCGCGCTGCACGAGGCCCTCAGGCTCCTGGAGGCGACGTGCTCGG
GGGTCAGGTCCGCGTGGCAGAGGTGGCAGGAGCGCGGCCCGGCGTCGGTG
AAGTGCGTGGTGAAGAAGAGATTCTTCCCGGTGCTTGTGGCGGTGGCACT
GTCCCTGCTTCTTGTTCTTCCGGCCTACTGGGCGATTCCGCGCGGCGGCG
GCAGCGGTAACGACGACGGTTCGGAGAGGCTTTCCGCCCGTCAGTGGCAG
GTCAGCAACCCACGATACCCGAACTGGACACCGTCTGCTTGTGTATCGTC
GTTCCTCCCGCGCCCCTTGGCTCGGAGGCACATATCTCGACTTGTTTGCG
TCTGGGTGGCAGACCCGTGACCAAGTGTAGACCAACTCCGTGAACACACG
TCCCAACGAAGGGGGGATAGCCCCGGGCAAGCTTGTTGTCGTCCAAGCGT
AGAGCAGTAAGTCTTGTTTTCCACTTTTATTTTCGGTAACCGTTTCGAGG
TGCCCTTTGTTTCGTCGGGCGCAACAGGCAAAGTACGATCTGCTGAGCAG
CAAGTTCAGCGCCGACACCGTGCGTCAGCGCCTGAAGTACGACAGCCTCG
CGGGGAGGCACTTGGAGCTGCAGGCCGAGTACGAATCCCTCCTGAAGGAC
TACAAGATTCAACAAAGGGCCAATCGGGCTCGTAGCTTGCCGAAGGTGAG
CCGCAGCATGGGATTTTTCAAGCTTGGCGGGGAGGAAGTGGGTGGCCGCC
AATCAGCTTGACTTTGTTCACGGTGAAGCCATTTTTCGCACCTTTAGACG
AGGAGTGTGTAGATGACTAAGACATGTATGCATTTGTCTTGTGGTATCTT
CGTTATGGCTCGATTCTCGCTTCACAAGCTCTAGATTTCACTTTTTCCCC
AATCTCGCACATCCTTTTGCCACTTGACCGAGCATGGATGACGATGCGGC
TCAAGTTGGGCGTGGCACAGCATGGGTTCTTGTTGTTGGCTGCACTATCG
ATTTGGTGTTGGGCACCTTTCGGAGAGCCCGGCAAGCACCTAAGCGCGAA
GGAAAGCTCGCGTTGCCCCTGCGGCACATTGATGAGGGTGATATCCTGCA
GTCCCGATTCTAGGAACGAACCAACACACATTTTGGACGTAGTGGGTCGC
TAGCCCAAAATGGCGGCCTTGTGCTTTATTCCGCGAAATGTCCTCCTTCT
GTAAACCAACTAACTCCCACACCGCCTCTATGACCCCACCCGGCGTGCGT
TTCAGACCCCCCCAGAGACCTGCAGCAAGTCGGAGTCGGTCCTGGGTCCC
GCGAAAGAAGCCCTCAAGCTTGCGGAACAGTCTGCGTACGAGTACTTGAG
CCACTTCGCCGAGGGCCTTCGCGAAGACGTGCATGAGGTACGATACGCAT
AAAAAAAGAGAAGAACGGCAAGTTTCAATTCGTCGCTGGATGCCTTTTCT
CCAGTCTTGGGTACTCTGTCGCTTGACATGGGTCTCTAAGGACAAGGAAT
TATTGCAACTTGTGGATTGCGAGGCGGCAGCGGAGGCACTTCGATTTTCG
CCTCCTGACTAGGTTTATTGTTGAGAAACGGTCAACATTGTTGGTTTCCT
GCTTCCGGCTTTGATTCTTCTACAAGTTTTACCCAATTTGTCCCCCACCC
ACGGTGTAGCTGCAAAGTTACGCAGCGCTATGCGCAGACGCACACCGGTC
GCGCAATACTCCAACGTTTCCAAGGCGGTCGTTCACCTCGCCCACGGCTC
GTGTGCAGACAGACAAGCCTGTCGGGCTTGATTTCTCGTGTTCGTCGTTA
CTCGGCAACTTTTGTTTTTCAAAGCGTTCGCCTCGACCACCATAGAGACT
ACGAAGCTCCACGTGTGATGTTTCCACCGGATCCGGACAATCCTGGCTAG
TGTGCTGTGGGCTCGGCCTCGATCTCGACCTCGCCTCTCACGGTTTTCCT
TTCCGACCGCGCACAAACGCTGAATCGAAATTTACCCAATGATGGCAAAA
CTGGAAGGTCTGTTTTCACTGCCCTCCCATCAAATGGAAATAGTTGCTTT
TCTGCATACAGATAAGGCGGACAGCGTCCGGCGCCACCCCCCCCTCCTCA
AGCCCGACTTCCATGTCCCACTGGTATTCCGTGACGATTGCCGGCGTACC
GGGCATGTCCCTGTGCGATGCAAGAGTATTTTTCCGGCATTGAGTATTGC
TGGAGATCGGTGCACCTGTGCTTTGCTCCACGTGTATCGGCACCCCGGCC
TCCACCTGTGAACAGCTATGCGGGTTGGCCTCGGCTAGTAAGCTACGGGT
GGCGATAGATGCCACCTGGAATACTGTATCCTTGGTGCAGTCGGTGGAAG
TTAGCCGTCGCGGGCCTCGTTGTTCTGTTTTGTGGGCGTACGGGCGTTGG
AACTCTCGGGGAGAGTATCGGACACTAGGTCACGGCGCCACCCAACACTT
GGGGGTGTTTGCGGCGGTCCCGTCGGCTGCGAGCTGCTACTGGCCTGCAG
GCCGCCGCATGGTCGGAGTTGAGCAGGCAGAAGAACGCAACGCCGCCCTG
CTGCCGTGTGTCCCGCAGATCGCGGAACTTTATGTGGGCATGATGTTCAA
GGAGGTAGGCGGAGGCGAGCACAGCAGCGGCGGTAGCAGCAACAATAGGT
TCGACGACAAAAGCGACGGTATTATCAAGGAGGGAGGCGGTGTGGGTGGC
GGCGAGAGCAGCAGCGGCGGTAGCAGCGCCAAACCCGACGGCGGCATGAA
GGAAGAACGCGGCGTTGGCGATGATGAGAGGACCCTCCGCGCTGCTTTGC
GTGAGCAATACGCCGACCGTCTAGATGGCGGGAAGGAGGGCGGTGGTGTA
GGCGGCGGCGAGCGAAGCAGCGGCGGTATCAGCACAAATCGCTCCGGCAA
GCACGACGGCATGACGGAAGAACGTGGCGGCGATGGTAAGAGGGGCCTCC
GTGCCGCCTTGCGCGAGAAAGTCGCCATGCAGCGCGCAGCTTCCCTTAAG
CAAACCACCGACCGGCAAGATGGCGGGAGGCGCGCGCCGCACGTAGACGG
GACGCCTTCGCAAGACCAGGGAGAGCGCAAAATTACCGAAGAACCGCGGG
ACGAGGTTCGAACCTTTGATGCGGAATACTGGCGAACGATCAAGGCCGGA
CCGGAGCGAGGGGTACGATTTGACCGCAGTGGGCGACGGGTCGTCCAGAA
ACGTGGGTGGGTGCGGTACTATAGCAACGCTGTCAGGACAGGCACCGCGG
TCCGCCTGGACATGACGGAGGAGCTAGAACCGTCGCCTAGGAAGAAGATG
AAGGCGGCGCTGACGCCATCCACGCGTAACCACGAGCCGGAGGAGACGCT
TAGTCTCGAGAATAGCGGCAGGTCAGGGGAGGTAAGGTCTGGGGACAAAG
ACGCCGAGGAAAGCGCGAAATTGAGCACGGGCCGGCAGGCAGTTGAGGAT
GCGGAAGCGGTCGGACTCGACGACAACCTGGAAGACTATTATCAGGCAGG
CGTAGCCAATTTGAGGAGCTGCAAGAATGAGGCCACTGACTTCATAGAGT
CCAGGTCGATTCACTGCAGATCGGGCGGGTTTGGGCTCTCAAGCGTTGAC
CAGAAGCCGAAGAACGCCAAGCCCAAGGGTCATATGGCCATCCAGGACGG
CGAAGAGCTGAGGGCCGACAAGTCGGACGGCGTAGAGGTTGAGAATAGGT
CGAAGAAGGGCTGTAAGAAGGTCAAGTCGAAGGATAGGTCGAAAGATAAG
CCGAAGGATAAGTCGAAGCACAAGTTGAAGGACAAGTCAAAAGATAAGTC
GAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGA
AGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAG
GACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGA
CAAGTCGAAGGACAAGTCGAAGGACAAGCCGAAGGGCAAGTCGAAGGGCA
AGTTGAAGGAGAAGTCGAAGGATAAGTCCAAGGCGGGCGAAAAGAAATAA
ACCCGCATCCGAGACCACGGGTGAGCTCCCCGGCGGGCCCGTTCCGCCCA
GCCTTGAAAAACTGTGTGAGTTGCAGTATTTGCGTGGTAGGAACAGCGAA
TAAGAGGGGCATGACGGATTTTTTATGGTCGAGATGGGGGGGAGCATTGT
GGGTGAGATTTGTCAACCGCCAAGCGGCGGGGCGTGTGCTAGCGACCCCA
GCGCGGCTGACGTTGAATCATCTCCTGCTCTCTTTCGGCCCGGTGATGTG
TTGCGCCGGACTGTTTTGGTATACAGAAGTTGTCACGTTGCGTGGAAATT
TTCCTCATGCCCTTCGTATGGCGAAGTTCAAACGAAACGTGATATCGGCT
GAGGGGGAATGGCTACTCTTGGTGTGTGCCAACGCGGCGATTTTGTTGTT
TTGGGCATAGTCCGGAACTCGTATTTGGATTTCTGCTCAGGTCGCGTTTC
GATCGACGACTATCAAAGAGTTGAACCCCGTCGAGGAAAAAAAAAAAAGG
GCTGGTGTAATTTTAGGTCGTGATACAGGTGGCCGTGCAGCAGTATTTGG
AAGTAGAAAGGTGTTGTCCGAAGATATGCTGGGGTGACCGTATTTTTGTT
AGTATTCTTGAAGAGTTGCATGCTTTTGGAGGAAAGGTCTGTAGATCGTA
CCTGTTTTCTTTGTGTTCAAAGTGCTTCGTGTTTTTTAGCGAGTGAGCGC
GTCGTTCATCCAACGTCTTGGAATGGGTACAACGTTAGACCAAACTTTGG
TCGGAAAAAGCTGCTCTATGGGGGAGGTCTAGCCCGACCCGCTGGCTGCA
CCCCTCCCTACCTATCTACAGCGCTCGTCACGGAACCCCCGTGGTTTGGA
TCTGTGGGTGTCGTTGTTTCAATTGTAACTAGTGTACTGATTATCCGCTA
CGCAGAACAACCAGCGAGATAGCCGTTTTTTATTTGATCGTTGGCAGTCC
CTCTGTCAGTCTGTGATCCCTACCTCATAATTTGAATTGAGGTGTGCGGT
TGTGTGCGTGTATCCCCTGTCATCACACGATGTTCTTGATGAAAACTTCT
GGCTTTAGCAACAAGCATCAAGCGTTTTGGTCTAGAGGGGTCTGGTGTTG
TTGTAGCTGTACTATGTAATTTGGAGTGTTGAACCGAACGTGTTCGAATT
TCGAGTGTTGATGGCCAGTGCAGAGTTAGGTTGACTGCTCATGCCGGTAA
TTACTCGTCCGACGTGTGGAGTTTTTCTGCGAAGGAAGGAAAGATCGTGC
GTCTTGCTTGTATCCCCCAGATGGTCCCTTAGCCCTTAAGGGATGTTATC
CTATCGTTGCGTGTAAGCCTGCTTTTCGCGATTTCCATGAATCTTGAGCG
TTTCCCTTGGGGCGACTTAAAAAAGGCGAAACACCTACATTCCACCGCGG
GCTAAGAAACGCGAGGGTCGCGTCACCTCTCGAAACGGGTTTGATTTGTG
AGCTTTGGCGACGAACGGGCATTTTTCGATGGGTGGCACCACTGTAGAGG
AGGGAACGCTTACTTCAAAACCCTGTATCCCTAACCCGAAGCACAGCGCG
TCCTGGGTGGCACCACGGCACATATTTTCTCCAGCCTCCGGCGATGGTTG
CGCCGCAGCAGTGTCTACGGCGATGTTCTTAAGCCGTCGTGCTAGAGGGT
CCATGGGCCCTGTCTGCCGCGCCGCCGCCCACCTCTGCTGCTGCCGCCGC
TTCCTGCGTGTCTCCACGGTATCAGGCACCGACCGCCCGAAAGCTTTACC
ACCTCCGCCGCTTCCTGCGTGTCTCCACGGTATCAGGCACCGACCGCCCG
AAAGCTTTACCACCTCTTGTCTAAGCCTTGTGTTACCCTTCCGGGCTGTT
TGTCGATTCTGGAGCAAAGCAAACGCGTCACCCTACAGTCTTACTGTCCT
CTCCTGGAACGACATCGCACCTGGTGTCGTCCTACTTTCTCGTTTTGCCC
GCAATGTGTCAGTTTTGGTTGTGGGTCGACATGACAAATAATTGGTTTTC
TGTCAAGGCATACGTGAACCATGCATCATCAGATACCTGGGCTCCATTTT
GTTTTTGTCCAAAATATAACACCTGTACGTCCTTGGTCTCAACATTCCTT
GCATTAAGTTCAACGACAAGCTCTGCCCCGCAGATGACCTCT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6505:105..7896+

>mRNA_Ecto-sp13_S_contig6505.17300.1 ID=mRNA_Ecto-sp13_S_contig6505.17300.1|Name=mRNA_Ecto-sp13_S_contig6505.17300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2400bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6505:105..7896+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGGAGAGAGGACTCAAAGCGGTACAGGTGATACTCGCGCCATCCC
CCAGGGAGAAGAGGAATTCGTAGTAGTCGATGATGACGGGTTGAACCTGG
AGGACACCGGGGCGGAGCCCGCAGGACAGGATGCTGCACCTTTTTCGCCG
GGAGCGTTTCCAGCTCTAGGTGCCAGTCTCTCCGCCGGCGTGGCCTTCGC
GCCTCCATCGTCTACGACGCAGCAGAGCCAAAACCTTCGCATGCCTTCAA
CGGACGCCACCGCCGCCGGTGCTGCCACCCCTGACGCCGCAGCAGCAGGC
GCCGTGGTGGCGGCGTTGGACCGAGTCTACAAGGCCCTGTGCGCCTACGC
CATCGCGGGGTACAAATTTCTCCACGCTCACGGTGCCGTGGCGTACAACT
TCGTCTACACCCACGCGGCCATGGCCTTCGAGTTCGTCTACGCCTACGCA
GCGGTCGCGCTGCACGAGGCCCTCAGGCTCCTGGAGGCGACGTGCTCGGG
GGTCAGGTCCGCGTGGCAGAGGTGGCAGGAGCGCGGCCCGGCGTCGGTGA
AGTGCGTGGTGAAGAAGAGATTCTTCCCGGTGCTTGTGGCGGTGGCACTG
TCCCTGCTTCTTGTTCTTCCGGCCTACTGGGCGATTCCGCGCGGCGGCGG
CAGCGGTAACGACGACGGTTCGGAGAGGCTTTCCGCCCGTCAGTGGCAGG
CAAAGTACGATCTGCTGAGCAGCAAGTTCAGCGCCGACACCGTGCGTCAG
CGCCTGAAGTACGACAGCCTCGCGGGGAGGCACTTGGAGCTGCAGGCCGA
GTACGAATCCCTCCTGAAGGACTACAAGATTCAACAAAGGGCCAATCGGG
CTCGTAGCTTGCCGAAGACCCCCCCAGAGACCTGCAGCAAGTCGGAGTCG
GTCCTGGGTCCCGCGAAAGAAGCCCTCAAGCTTGCGGAACAGTCTGCGTA
CGAGTACTTGAGCCACTTCGCCGAGGGCCTTCGCGAAGACGTGCATGAGA
TCGCGGAACTTTATGTGGGCATGATGTTCAAGGAGGTAGGCGGAGGCGAG
CACAGCAGCGGCGGTAGCAGCAACAATAGGTTCGACGACAAAAGCGACGG
TATTATCAAGGAGGGAGGCGGTGTGGGTGGCGGCGAGAGCAGCAGCGGCG
GTAGCAGCGCCAAACCCGACGGCGGCATGAAGGAAGAACGCGGCGTTGGC
GATGATGAGAGGACCCTCCGCGCTGCTTTGCGTGAGCAATACGCCGACCG
TCTAGATGGCGGGAAGGAGGGCGGTGGTGTAGGCGGCGGCGAGCGAAGCA
GCGGCGGTATCAGCACAAATCGCTCCGGCAAGCACGACGGCATGACGGAA
GAACGTGGCGGCGATGGTAAGAGGGGCCTCCGTGCCGCCTTGCGCGAGAA
AGTCGCCATGCAGCGCGCAGCTTCCCTTAAGCAAACCACCGACCGGCAAG
ATGGCGGGAGGCGCGCGCCGCACGTAGACGGGACGCCTTCGCAAGACCAG
GGAGAGCGCAAAATTACCGAAGAACCGCGGGACGAGGTTCGAACCTTTGA
TGCGGAATACTGGCGAACGATCAAGGCCGGACCGGAGCGAGGGGTACGAT
TTGACCGCAGTGGGCGACGGGTCGTCCAGAAACGTGGGTGGGTGCGGTAC
TATAGCAACGCTGTCAGGACAGGCACCGCGGTCCGCCTGGACATGACGGA
GGAGCTAGAACCGTCGCCTAGGAAGAAGATGAAGGCGGCGCTGACGCCAT
CCACGCGTAACCACGAGCCGGAGGAGACGCTTAGTCTCGAGAATAGCGGC
AGGTCAGGGGAGGTAAGGTCTGGGGACAAAGACGCCGAGGAAAGCGCGAA
ATTGAGCACGGGCCGGCAGGCAGTTGAGGATGCGGAAGCGGTCGGACTCG
ACGACAACCTGGAAGACTATTATCAGGCAGGCGTAGCCAATTTGAGGAGC
TGCAAGAATGAGGCCACTGACTTCATAGAGTCCAGGTCGATTCACTGCAG
ATCGGGCGGGTTTGGGCTCTCAAGCGTTGACCAGAAGCCGAAGAACGCCA
AGCCCAAGGGTCATATGGCCATCCAGGACGGCGAAGAGCTGAGGGCCGAC
AAGTCGGACGGCGTAGAGGTTGAGAATAGGTCGAAGAAGGGCTGTAAGAA
GGTCAAGTCGAAGGATAGGTCGAAAGATAAGCCGAAGGATAAGTCGAAGC
ACAAGTTGAAGGACAAGTCAAAAGATAATCGAAGGACAAGTCGAAGGACA
AGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAG
TCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTCGAAGGACAAGTC
GAAGGACAAGTCGAAGGACAAGCCGAAGGGCAAGTCGAAGGGCAAGTTGA