prot_Ecto-sp13_S_contig65.17290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65.17290.1
Unique Nameprot_Ecto-sp13_S_contig65.17290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length225
Homology
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 4.110e-64
Identity = 111/152 (73.03%), Postives = 121/152 (79.61%), Query Frame = 0
Query:    4 HVGGHILKDKVRVLCTVCAFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLGSVKAGSHTSPCTNMVLKCLFCSQDTYMWKYGISEHVARCHREDILVAAGTRVDRFKEASTISESEKAKVLQKFKAGRPRRRGQENEALP 155
            HVGG    +K   + TVC FCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNL S +A S TSPCTNMVLKC  CSQD Y+W YG+ +HV RCH+ ++LVA GT  D+FKEA TISESEKAKVL K KAGRPRRR Q N   P
Sbjct: 1076 HVGGDP-GNKTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGTGADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLPP 1226          
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 1.970e-56
Identity = 95/129 (73.64%), Postives = 104/129 (80.62%), Query Frame = 0
Query:    6 GGHILKDKVRVLCTVCAFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLGSVKAGSHTSPCTNMVLKCLFCSQDTYMWKYGISEHVARCHREDILVAAGTRVDRFKEASTISESEKAK 134
            GGHILKDKV    T C FCGGVG  +TIHDPPG+ARPLVHSTCPSAPRSDARQEAVALNL S +AGS TS CTNMV KC FCSQ  Y+WKY +S+H+ RCH+ D+LVA GT  D FKE  TISESEKAK
Sbjct:  403 GGHILKDKVS---TACGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGTGADNFKETCTISESEKAK 528          
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 9.030e-52
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 0
Query:   80 MVLKCLFCSQDTYMWKYGISEHVARCHREDILVAAGTRVDRFKEASTISESEKAKVLQKFKAGRPRRRGQENEALPTGALGSTEGNGNFGRKLAGT 175
            MVLKCLFCSQDTY+WKYG+SEHV RCHREDILVAAGT VDRFKEA TISESEKAKVLQKFKAGRPRRRGQ NEALPTGALGSTEGNG FGR ++GT
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGTTVDRFKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGNGTFGRNMSGT 96          
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Match: A0A6H5K5R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R3_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 4.440e-38
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 0
Query:   80 MVLKCLFCSQDTYMWKYGISEHVARCHREDILVAAGTRVDRFKEASTISESEKAKVLQKFKAGRPRRRGQENEALPTGALGSTEGNGNFGRKLAGT 175
            MVLKC  CSQ+ Y+WKYG+SEHV R H+ED+ VAAGT VD+FKEA +ISESEKAK L KFKAG+PR+RGQ NE LP GALG TEGNG  GR +AGT
Sbjct:    1 MVLKCFVCSQNNYIWKYGMSEHVTRRHQEDMRVAAGTGVDKFKEAYSISESEKAKALHKFKAGKPRQRGQGNEVLPPGALGRTEGNGASGRNMAGT 96          
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Match: A0A371DN83_9APHY (PHD domain-containing protein n=1 Tax=Polyporus brumalis TaxID=139420 RepID=A0A371DN83_9APHY)

HSP 1 Score: 54.7 bits (130), Expect = 4.840e-5
Identity = 44/156 (28.21%), Postives = 67/156 (42.95%), Query Frame = 0
Query:    4 HVGGHILKD-KVRVLCTVCAFC------------GGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLGSVKAGSHTSPCTNMVLKCLFCSQDT-YMWKYGISEHVARCHREDILVAAGTRVDRFKEASTISESEKAKVLQKFKAGRPR 145
            H+G HIL D ++    T C FC             G G R       GE      S CP+            L++      +  SPCTN+ ++C  C +D   +WKY +S H+ R HR+D        V+ F     +S +E A+ ++K  + +PR
Sbjct: 1423 HIGAHILFDSRIDRSSTPCGFCLSTADTCAVYLKRGQGARR------GERLDYNKSRCPAK---------YTLSITRTSQPAARSPCTNVPMRCSLCPKDAPAVWKYNLSSHLLRAHRQD------PEVEPFASLWRLSPTEVAR-MEKLYSAKPR 1556          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65.17290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K6M3_9PHAE4.110e-6473.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L2E6_9PHAE1.970e-5673.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNW9_ECTSI9.030e-5289.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5R3_9PHAE4.440e-3871.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A371DN83_9APHY4.840e-528.21PHD domain-containing protein n=1 Tax=Polyporus br... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65contigEcto-sp13_S_contig65:43683..44645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65.17290.1mRNA_Ecto-sp13_S_contig65.17290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65 43516..44708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65.17290.1 ID=prot_Ecto-sp13_S_contig65.17290.1|Name=mRNA_Ecto-sp13_S_contig65.17290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MRLHVGGHILKDKVRVLCTVCAFCGGVGCRSTIHDPPGEARPLVHSTCPS
APRSDARQEAVALNLGSVKAGSHTSPCTNMVLKCLFCSQDTYMWKYGISE
HVARCHREDILVAAGTRVDRFKEASTISESEKAKVLQKFKAGRPRRRGQE
NEALPTGALGSTEGNGNFGRKLAGTGPWRTWARRKRRKRRKRRKRRRTRT
RNKTTTTTTTTTTTTKTMTKRRKK*
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