prot_Ecto-sp13_S_contig6498.17285.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6498.17285.1
Unique Nameprot_Ecto-sp13_S_contig6498.17285.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length293
Homology
BLAST of mRNA_Ecto-sp13_S_contig6498.17285.1 vs. uniprot
Match: D8LGG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG0_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.580e-131
Identity = 234/292 (80.14%), Postives = 235/292 (80.48%), Query Frame = 0
Query:    1 MNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQMPQGEYRGAQLEKNRQLKVALTRTHFKFGEEEMDYTTDHQMGFQYDPEKVKSAGNRGLAKEVXXXXXXXXXXXXXXXXXXXXXAMRTQRASGGMVATPEERHAQIDKNRALKKQLQTTHYEIGTDDDYM 292
            MNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQ+PQGE RG QLEKNRQLKV L                               AGNRGLAKEV                     AMRTQRASGGMVAT EER AQIDKNRALKKQLQTTHYEIGTDDDYM
Sbjct:   12 MNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQVPQGEDRGVQLEKNRQLKVKL-------------------------------AGNRGLAKEVKADLSRTHFTLGNHKFDWQTDAMRTQRASGGMVATAEERQAQIDKNRALKKQLQTTHYEIGTDDDYM 272          
BLAST of mRNA_Ecto-sp13_S_contig6498.17285.1 vs. uniprot
Match: A0A835YW84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW84_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.420e-36
Identity = 105/301 (34.88%), Postives = 140/301 (46.51%), Query Frame = 0
Query:   40 MIRELEQRKLRNTQASVAFGSAKILYESDAMSR-------------------QKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXX---RTMATDQMDLQMP----------QGEYRGAQ---------------LEKNRQLKVALTRTHFKFGEEEMDYTTDHQMGFQYDPEKVKSAGNRGLAKEVXXXXXXXXXXXXXXXXXXXXXAMRTQR-ASGGMVATPEERHAQIDKNRALKKQLQTTHYEIGTDDDYM 292
            M  EL +RKL NT+ S+A GSA  +YE+DA  +                   QKDIL +   G D + N+ LK  LTRT F+ G+E + Y+R S LPDPTG L ++TGVLN                          +    + L++P             + G Q               L+ NR LKVALTRT+  FG+E  +Y +D++ GF+YD ++VKSAG   L+KEV                     A R  R A     + PEE   Q + NR LK+ LQ T+Y IGTD DYM
Sbjct:    1 MASELHRRKLNNTRTSIALGSAPTVYETDAQGQLPAPMYATLHCGRYESQAHQKDILSSHSAGADREHNRLLKAQLTRTTFSLGDERVDYQRVSALPDPTGRLHEFTGVLNAEVKEMMKRSNMYFGEPGGNFAKGHVLRNPALLLRLPLPGNAAPSYDTAAHEGMQAVGASGVAAADMQATLQHNRDLKVALTRTNLNFGDEVPEYVSDYKRGFKYDADEVKSAGRACLSKEVKDDLRRSHFKFGTDPVVWETDARRNMRQAEQAEHSGPEEVARQREHNRLLKQSLQRTNYAIGTDADYM 301          
BLAST of mRNA_Ecto-sp13_S_contig6498.17285.1 vs. uniprot
Match: A0A7S2FEP3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEP3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.000e-14
Identity = 47/92 (51.09%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   13 TKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFG 104
            +KRF TT  +  E VA RR EV +R  M   L  RKL NTQ S+ FGS  ++YESDAM RQKDILG    G D K  KELK  L +++   G
Sbjct:    3 SKRFTTTLNSSLEAVAKRRDEVENRQQMSASLRGRKLANTQTSIVFGSDSVVYESDAMRRQKDILGNKSAGADAKACKELKLGLQKSNIAIG 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6498.17285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGG0_ECTSI1.580e-13180.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YW84_9STRA1.420e-3634.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FEP3_9STRA3.000e-1451.09Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6498contigEcto-sp13_S_contig6498:2554..6914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6498.17285.1mRNA_Ecto-sp13_S_contig6498.17285.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6498 2536..6914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6498.17285.1 ID=prot_Ecto-sp13_S_contig6498.17285.1|Name=mRNA_Ecto-sp13_S_contig6498.17285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLR
NTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTH
FTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTEVKNMIKSTNLSFGNAPT
VYRTMATDQMDLQMPQGEYRGAQLEKNRQLKVALTRTHFKFGEEEMDYTT
DHQMGFQYDPEKVKSAGNRGLAKEVKADLSRTHFTLGNHKFDWQTDAMRT
QRASGGMVATPEERHAQIDKNRALKKQLQTTHYEIGTDDDYM*
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