prot_Ecto-sp13_S_contig6497.17283.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6497.17283.1
Unique Nameprot_Ecto-sp13_S_contig6497.17283.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6497.17283.1 vs. uniprot
Match: A0A6H5KYY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY8_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.190e-36
Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0 
Query:   10 LAEDERNKSTPWRPPGSPGSANVVATAXXXXXXXXXXMARSVRPTMNPHRNRISRTKGGPTREDSVDRRVPPRDDDFSHVGGGWG 94
             AEDERNKSTPWRPPGSP SANVVATAXXXXXXXXXX  RS RPTMNPHRNRISR+KGGP R+ SVDRR PPRDD+FSH GGGWG
Sbjct:   34 FAEDERNKSTPWRPPGSPSSANVVATAXXXXXXXXXXXXRSARPTMNPHRNRISRSKGGPIRQGSVDRRGPPRDDEFSHAGGGWG 118
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BLAST of mRNA_Ecto-sp13_S_contig6497.17283.1 vs. uniprot
Match: D8LHB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB1_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.340e-33
Identity = 75/94 (79.79%), Postives = 76/94 (80.85%), Query Frame = 0 
Query:    1 PVLEGGSARLAEDERNKSTPWRPPGSPGSANVVATAXXXXXXXXXXMARSVRPTMNPHRNRISRTKGGPTREDSVDRRVPPRDDDFSHVGGGWG 94
            PVLEGGSARLAEDERNKSTPWRPPGSP         XXXXXXXXXX     RPTMNPHRNRISR KGGPTR+ SVDRR PPRDDDFSH GGGWG
Sbjct: 1297 PVLEGGSARLAEDERNKSTPWRPPGSPXXXXXXXXXXXXXXXXXXXXXXXARPTMNPHRNRISRNKGGPTRQGSVDRRGPPRDDDFSHAGGGWG 1390
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6497.17283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYY8_9PHAE1.190e-3685.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB1_ECTSI1.340e-3379.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6497contigEcto-sp13_S_contig6497:2205..3145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6497.17283.1mRNA_Ecto-sp13_S_contig6497.17283.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6497 2205..3145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6497.17283.1 ID=prot_Ecto-sp13_S_contig6497.17283.1|Name=mRNA_Ecto-sp13_S_contig6497.17283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
PVLEGGSARLAEDERNKSTPWRPPGSPGSANVVATAVAATAAAAGAMARS
VRPTMNPHRNRISRTKGGPTREDSVDRRVPPRDDDFSHVGGGWG
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