mRNA_Ecto-sp13_S_contig6481.17266.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 657 bits (1695), Expect = 2.660e-229 Identity = 390/565 (69.03%), Postives = 433/565 (76.64%), Query Frame = 1
Query: 13 GDEEQEDAQIPTAATPPVLLPQQQQIDDGDGNEEDALVPPGSPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSDKEKQRAELEEQQEKIEAVASDKAXXXXXXXXXXXXXXXXXXXXLEQLASAKDELERKVKKLEKHVPVLDSDPNDDVDFAGGLALRRRVATTETAEGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGEISKATKPKG 1707
GD+++EDA P + PPVLLPQQQQID PN R ERVRSP+H LSP KA +VD + AQ SSSAGL LI + P ALEDIQRVI A+T RSI+P DELSD+ RR LGTLVTMSTALGEVAL+HTEDM V+RKELALPPFSKEYYSAVRSGLCQAYLAASVIDS+WVSTSKTG MGK GAAL+LMS AVP++ GL LAG+ALE GD YLQTRRLVKITAMAPD VECCSLARRLALQLTD LR++ S T DD +V +TTA G S GR A +MPGDMSEEDVF++LLEEV +Y+RNDHGG RLGKKHL KLLKAIQ G LDGS T KI++LLLEILP+A K AAT TPKEV+VRSPP A HDSGLPS +FAA++AEL LKS K+KQ+AELEE AV S XXXXXXX XXXXX LERKVKKLE+HVP LDS+P+DDVDF G LALRRRVA +ETA+GF DRARDRAARA DHHPVTV+EQREFEALQNEKHR EARLRELEG+ISKAT KG
Sbjct: 92 GDKKEEDAPAPRTSPPPVLLPQQQQIDAXXXXXXXXXXXXXXPNSREVVVEERVRSPEHASLSPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTA---GGSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERNDHGGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVES-VXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRKG 652
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 6.830e-221 Identity = 384/564 (68.09%), Postives = 429/564 (76.06%), Query Frame = 1
Query: 4 TGEGDEEQEDAQIPTAATPPVLLPQQQQIDDGDGNEEDALVPPGSPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSDKEKQRAELEEQQEKIEAVASDKAXXXXXXXXXXXXXXXXXXXXLEQLASAKDELERKVKKLEKHVPVLDSDPNDDVDFAGGLALRRRVATTETAEGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGEISKAT 1695
T +GD+ +DA +P P VLLPQQQQID GD EEDA V SPNQR E S SPEKA +VDR+F AQL SSAGLDSLI + PAALE+IQ I A S YP +EL DM RR LGTLVTMSTALGEVALRHTEDM+VQRKELALPPFSK YY+A+R+GLC+AYLAAS IDSDWV TSKTG MGK GAAL+LMSSAVP++ GL LAG+ALE GD YLQTRRLVKITAMAPD VECCSLARRLALQLTD LR++ S T DD +V +TTA G S GR A +MPGDMSEEDVF++LLEEV + +RNDHGG RLGK+HL KLLKAIQ G LDGS T KI++LLLEILP+A K AAT TPKEV+VRSPP A HDSGLPS +FAA++AEL LKS K+KQ+AELEE AV S XXXXXXX XXXXX ELERKVKKLE+HVP LDS+P+DDVDF G LALRRRVA +ETA+GF DRARDRAARA DHHPVTV+EQREFEALQ+EKHR EARLRELEG+I KAT
Sbjct: 284 TLKGDQRGKDAPVPPPXAPTVLLPQQQQIDAGDETEEDAPVLLDSPNQRQEVVAGSANSTGRASTSPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTA---GGSGCGRGADMMPGDMSEEDVFKYLLEEVTADERNDHGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVES-VXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQIIKAT 843
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 551 bits (1420), Expect = 4.580e-185 Identity = 341/526 (64.83%), Postives = 388/526 (73.76%), Query Frame = 1
Query: 1 ETGEGDEEQEDAQIPTAATPPVLLPQQQQIDDGDGNEEDALVPPGSPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSDKEKQRAELEEQQEKIEAVASDKAXXXXXXXXXXXXXXXXXXXXLEQLASAKDELERKVKKLEKHVPVLDSDPNDDVDFAGGLALRRRVATTETAEGFFDRARDRAARAG 1578
+T +GDE++EDA VLLPQQQ+ + NE+D VP G PNQR E ER RSP+ LSP KA ++DR+FSAQLSSSAGLDSLI + P ALEDIQRVI ++ A S+ P D+LSD+DGRRKLGTLVTMSTALGEVALRHTEDM++QRKELALP FS YYSAVRSGLCQAYLAASVIDSDWVSTSKTG MGKAGAA++LMSSAVPVV GL LAG+ALE GDHYLQTRRLVKITAMA DAV+CC LARRLALQLTD LR+D TAD+A EVR TTA MNG A + PGDMSEEDVFE+LLEEVASYKRNDHGG RLGKKHL KLLKAIQRG LDGS TE KIEVL+L+ILP+A LAAT STPKEVIVRSPPVV P HD GLPS +F AM+A L+ LK D+E Q+ XXXXXXXXXXXXXXXXXXXX + S +L KV +EK VP D +P D + G L++++ E E F+ R + + G
Sbjct: 333 QTLKGDEKEEDAPXXXXXXXXVLLPQQQETGEXXXNEKDNPVPLGFPNQREEAVWERARSPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGG------ADMTPGDMSEEDVFEYLLEEVASYKRNDHGGVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQQXXX---------------XXXXXXXXXXXXXXXXXXXXXXAVESRNKQLREKVAAMEKRVPEGDCEPCDRGNAEGRQVLQQKLEMKEDLETFWQRKENAGKKKG 837
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 1.520e-172 Identity = 356/695 (51.22%), Postives = 400/695 (57.55%), Query Frame = 1
Query: 136 SPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSDKEKQRAELEEQQEKIEAVASDKAXXXXXXXXXXXXXXXXXXXXLEQLASAKDELE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKVKKLEKHVPVLDSDPNDDVDFAGGLALRRRVATTETAEGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGEISKATK 1698
SP R G RVRSP++ LSP KAA+VDR+F QLSSSAGLDSLI++ P ALEDIQRVI A A Y DELSDM+ RRKLG L+ M+ ALGEVAL HTED DVQRKELAL PFSK YY+AVRSGLC AYLAASVIDSDWVSTSKTG MGK G AL L+SSAVPV+ GLA LAG+AL TGDHYLQTRRL KITAMA D +ECCSLARRLALQLTD L+ DT D+ +V TTA MNG S GR A ++P + E+DVFEHLLEEVA Y+R+DHGG RLGKKHL KLLKAIQRG LDGS + K+E+LLLEILP+A I+ + TS +PKEVIV+SPP +AP H+ LPSM D AA++A ++ L S K+ QRAEL XXXXXXXXXXXXXXXXXXXX RKVKKLEKH LDS+P+DDVD+ GGLA+R+RVA TETA+GFFDRARDRA A DHHPVTVAEQREFEALQNEKH G EARLRELEGEISKATK
Sbjct: 445 SPTHRQAAVGGRVRSPENASLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEALTSAKDMQRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVKKLEKHASELDSEPDDDVDYGGGLAVRQRVAVTETAQGFFDRARDRATTAADHHPVTVAEQREFEALQNEKHCGHEARLRELEGEISKATK 1139
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 8.340e-162 Identity = 269/399 (67.42%), Postives = 309/399 (77.44%), Query Frame = 1
Query: 85 QIDDGDGNEEDALVPPGSPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHK----------IEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSD 1251
QI GD E+DA VPPGS N R E GERVRSP+H LSPEKA + DRVF AQLSSSAGLDSLI + P ALEDIQRVI AS A S+ +ELSDM RRKLGTLVTMSTALGEV L+HTEDMDV+R+EL LPPFSK YY+AVR+G+C AYLAASVIDSDWVSTSKTG MGKAGAAL++MS A+PVV G LAG+A+++GDHYLQTRRLVKITAMA DA+ECCSLARRLALQL LR+D + A++ +RA TA MNG S G+ + +P MSE DVFE++L+EVAS NDHGG RLGKKHL KLLKA+QRG LDG CTE K + VLLLEILP+A I+ AATSS KEVIV+S PVV HDSG PSM DFAA++A ++ LKSD
Sbjct: 273 QIFRGDRMEKDAPVPPGSRNGRHEAVGERVRSPEHASLSPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRNDANAGANEVDHIRADITAGMNGGSGSGQGPNSLPAIMSEGDVFEYVLKEVASCGHNDHGGKRLGKKHLRKLLKAVQRGCLDGLSCTEQKARTRMSSRQQMAVLLLEILPEADIRHAATSSLLKEVIVKSLPVVGAAHDSGSPSMADFAALQAAVEELKSD 671
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 486 bits (1252), Expect = 6.070e-156 Identity = 266/381 (69.82%), Postives = 298/381 (78.22%), Query Frame = 1
Query: 133 GSPNQRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASRYGRSAHVMPGDMSEEDVFEHLLEEVASYKRNDHGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAPVHDSGLPSMGDFAAMRAELQVLKSDKEKQRAEL 1275
GSPNQR E E VRSP+H LSPEKA +VDR+F QLSSSAG DSLI + P ALEDI RVI A A S+ DE+SDM+ RRKLGTLV M+ ALGEVAL HTEDMDVQRKELAL PFSK YY+AVRSGLC AYLAASVIDSDWVST KTG MGK G AL L+SSAVPV+ GLA LAG+AL TGDH LQTRRLVKITAMA D +ECCSLARRLALQLTD L+ DT D+A +V TA MNG S GR A + P DM E+DVFE+LLEEVA Y+R+DHGG RLGKKHL KLLKAIQRG LDGS + K+E LLLEILP A I+ + TSSTPK+VIVRSPP +AP HD LPSM D AA++A ++VL K+KQRAEL
Sbjct: 404 GSPNQREEVVREGVRSPEHASLSPEKAEEVDRLFRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMADIAALQAAVEVLTLAKDKQRAEL 784
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: A0A6H5KJV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV0_9PHAE) HSP 1 Score: 241 bits (615), Expect = 3.470e-69 Identity = 141/231 (61.04%), Postives = 158/231 (68.40%), Query Frame = 1
Query: 145 QRPETAGERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVA-------------------------------LRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGK---------AGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVK 717
QR E ERVRSP+ LSPEK +VDR+F+AQLSS AGL+SL+ + P ALEDIQRVI ++ RS YP D+ SDMDGRRKL TLVTMSTALGEVA LRHTEDMDVQRKE+ALP F K Y + VRSGLCQAYLA+SVIDSDWVS SKTG MGK AGAA++LMS AVPVV GL LAG+ALE GDH+ QTRRLVK
Sbjct: 135 QREEVVRERVRSPERASLSPEKTEEVDRLFTAQLSSHAGLNSLVRENPEALEDIQRVIQSTVVRSFYPDDKHSDMDGRRKLATLVTMSTALGEVAVSPVRGTIPSACTSNGLTSFSVRNWCRIWNVLRHTEDMDVQRKEMALPLFLKAYCTVVRSGLCQAYLASSVIDSDWVSMSKTGGMGKVGAALGSKSAGAAVKLMSRAVPVVGGLPELAGKALEAGDHFFQTRRLVK 365
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.000e-63 Identity = 206/546 (37.73%), Postives = 285/546 (52.20%), Query Frame = 1
Query: 163 GERVRSPQHDFLSPEKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASR---YGRSAHVMPGDMSEEDVFEHLLEEVASYKRND----------HGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKEVIVRSPPVVAP-------------VHDSGLPSMGDFAAMRAELQVLKSDKEKQRAELEEQQEKIEAVASDKAXXXXXXXXXXXXXXXXXXXXLEQLASAKDELERKVKKLEKHVPVLDSDPNDDVDFAGGLALRRRVATTETA-EGFFDRARDRAARAGDHHPVTVAEQ-------REFEALQNEKHRGLEARLRELEGEISKATK 1698
G+ R+ + A +D + AQ+SS + L +L LE +++++ A P LS+ +L LV M+ LG++ RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TSKTGRMG AG L+ +SSAVPVV GLA LA AL+ GD YLQTRR+ KI +APD+ +CC LAR LALQL+D T T D A E + TA M G + + P +EE V + +EEVA Y+ N+ G +LGK+HL LLKA+ R L G+ + K++VL+ ILP+A ++ +TS +E P V D S D AA+ + ++ E EL+ E XXXXXXXXXXXXXXXXXXXX KK+ K P D + V GGLAL++R A TETA + F +RA++RA AG+ VT+ + +E + +E HR +A+L +G + + T+
Sbjct: 387 GKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILNKKVMKPGP----DSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGND-VVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITR 927
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 229 bits (583), Expect = 1.870e-61 Identity = 145/346 (41.91%), Postives = 195/346 (56.36%), Query Frame = 1
Query: 157 TAGERVRSPQHDFLSP----EKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASR---YGRSAHVMPGDMSEEDVFEHLLEEVASYKRND----------HGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKE 1143
T G++ P P + A +D + AQ+SS + L +L A+LE + +++ A P L+ +L LV M+ LG++ RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TSKTGRMG AG L+ +SSAVPVV GLA LA AL+ GD YLQTRR+ KI MAPD+ +CC LAR LALQL+D T T D A E TTA M G + + P +EE V + +EEVA Y+ N G +LG +HL LLKA+ R L G+ + K++VL+ ILP+A K+ +TS +E
Sbjct: 408 TQGDKPGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQE 753
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 224 bits (570), Expect = 2.620e-59 Identity = 142/346 (41.04%), Postives = 196/346 (56.65%), Query Frame = 1
Query: 157 TAGERVRSPQHDFLSP----EKAAKVDRVFSAQLSSSAGLDSLIEKYPAALEDIQRVIAASTARSIYPHDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSDWVSTSKTGRMGKAGAALQLMSSAVPVVDGLAALAGRALETGDHYLQTRRLVKITAMAPDAVECCSLARRLALQLTDSLRHDTSTTADDAGEVRASTTAVMNGASR---YGRSAHVMPGDMSEEDVFEHLLEEVASYKRND----------HGGNRLGKKHLCKLLKAIQRG*LDGSRCTEHKIEVLLLEILPDAGIKLAATSSTPKE 1143
T G++ P P + A +D + AQ+SS + L +L +LE +++++ A P LS+ ++ LV M+ LG + RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TSKTGRMG AG L+ +SSAVPVV GLA LA AL+ GD YLQTRR+ KI +APD+ +CC LAR LALQL+D T T D A E TTA M G + + P +EE V + +EEVA Y+ N+ G +LG +HL LLKA+ R L G+ + K++VL+ ILP+A ++ +TS +E
Sbjct: 593 TQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRE 938 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6481.17266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6481.17266.1 >prot_Ecto-sp13_S_contig6481.17266.1 ID=prot_Ecto-sp13_S_contig6481.17266.1|Name=mRNA_Ecto-sp13_S_contig6481.17266.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSAVRSback to top mRNA from alignment at Ecto-sp13_S_contig6481:678..4914+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6481.17266.1 ID=mRNA_Ecto-sp13_S_contig6481.17266.1|Name=mRNA_Ecto-sp13_S_contig6481.17266.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4237bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6481:678..4914+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6481:678..4914+ >mRNA_Ecto-sp13_S_contig6481.17266.1 ID=mRNA_Ecto-sp13_S_contig6481.17266.1|Name=mRNA_Ecto-sp13_S_contig6481.17266.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6481:678..4914+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |