mRNA_Ecto-sp13_S_contig647.17250.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: D8LPT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPT7_ECTSI) HSP 1 Score: 582 bits (1501), Expect = 1.320e-200 Identity = 299/315 (94.92%), Postives = 303/315 (96.19%), Query Frame = 1
Query: 7 MLAPMVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPPP----SPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYGYGEEGKAPVVANGDGGTTNGSNGRKEAPASTTADAVN 939
MLAPMVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSP SPSGVDGRE+VGDKAGHDGVSEVVV PAA+ARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRK GFPEEWLASTFSAATVGNGIMAV AGVVAQ+AADKLGDIGPFQAR ATVA+ALTLLALSLLMLWEENYGYGEEGKAPVVANGDG TTNGSNGRKEAP STTADAVN
Sbjct: 1 MLAPMVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPXXXXXXSPSGVDGRESVGDKAGHDGVSEVVVGPAAAARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKQGFPEEWLASTFSAATVGNGIMAVLAGVVAQVAADKLGDIGPFQARGATVAIALTLLALSLLMLWEENYGYGEEGKAPVVANGDGVTTNGSNGRKEAPTSTTADAVN 315
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A835Z703_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z703_9STRA) HSP 1 Score: 326 bits (836), Expect = 2.140e-101 Identity = 166/263 (63.12%), Postives = 198/263 (75.29%), Query Frame = 1
Query: 40 SLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYG 828
+ G+ P+WPDWAV TF SL + C VL+ A YD + R S V G+ A FR+FQ KYL VY+ VMLADWLQGTNMYTLYQSYGV+VGTLFLTGFSS+A+FGTFLGLFVD+FGRR GC+ FC+LE++INTLEH P M LLL GRVLGGISTSLLF+AFESWMVS+HR++GFPE WLASTFS ATVGNGI+A+ AG++AQ+AAD+LG+IGPFQA A+ALT++AL LL+ W ENYG
Sbjct: 11 TFGVAKPDWPDWAVTTFASLCVACLVLLLAD-RYDGRVREGATSSGEVSGKLAPS--------------------FRKFQVKYLSVYMVVMLADWLQGTNMYTLYQSYGVNVGTLFLTGFSSSAIFGTFLGLFVDKFGRRLGCLAFCVLEIIINTLEHFPSMGLLLAGRVLGGISTSLLFTAFESWMVSEHRRMGFPEAWLASTFSLATVGNGIVAIIAGIMAQVAADRLGEIGPFQA-----AIALTVIALVLLLFWRENYG 247
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A7S4CK74_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CK74_9EUGL) HSP 1 Score: 285 bits (728), Expect = 2.330e-89 Identity = 150/247 (60.73%), Postives = 177/247 (71.66%), Query Frame = 1
Query: 85 TFVSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENY 825
TFV L C VL QW V+ + + D +P FRRFQ +YL VYLTVMLADWLQGTNMYTLYQSY +D+G LFLTGFSSAAVFGTF GL+VD +GRR GCIVFC+LE++IN LEHIP LLLLGRVLGGISTSLLFSAFESWMVS+HRK GFPE WLASTF+ +++GNG++AV AGVVAQ+AAD GDIGPFQ +A+ALT++ L +++ W ENY
Sbjct: 2 TFVGLLGLCGVLSLVQWR------------GSVESKSVLADG-----------DPKQLPAFRRFQVQYLAVYLTVMLADWLQGTNMYTLYQSYNMDIGALFLTGFSSAAVFGTFTGLYVDTWGRRLGCIVFCVLEIIINALEHIPHFPLLLLGRVLGGISTSLLFSAFESWMVSEHRKRGFPEAWLASTFALSSIGNGLVAVLAGVVAQVAADVSGDIGPFQ-----LAIALTVVTLVMVLFWPENY 220
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A7S1UB92_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB92_9STRA) HSP 1 Score: 272 bits (696), Expect = 9.070e-81 Identity = 144/270 (53.33%), Postives = 181/270 (67.04%), Query Frame = 1
Query: 16 PMVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLM-LWEEN 822
P ++++ + P+WP W+V V + + K+++P A + E A A FR FQ +YL VYL VMLADWLQGTNMYTLY YGVD +LFL GF S+AVFGT LGLFVD +GR+ C+VFC LEVVIN LEH+PD RLLL+GRVLGG+STSLLFS+FESWMVS+HRK G+PEE L+STF+ A+ GNGIMA+ AG++AQ+A D+LGDIGPFQA A+ALT+LA L+ LW+EN
Sbjct: 45 PPYLKAMEAVQAMMPDWPAWSVKYLVGTGAFAFAALGLEMALRPKRKAP--------------SSASGETKEEKASSTAVPAGFRAFQARYLAVYLVVMLADWLQGTNMYTLYTGYGVDTASLFLGGFLSSAVFGTVLGLFVDDYGRKLACMVFCFLEVVINLLEHVPDFRLLLVGRVLGGLSTSLLFSSFESWMVSEHRKQGYPEELLSSTFALASTGNGIMAIIAGLIAQVACDRLGDIGPFQA-----AIALTVLAWVLIATLWDEN 295
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A448ZF64_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZF64_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.570e-78 Identity = 132/258 (51.16%), Postives = 174/258 (67.44%), Query Frame = 1
Query: 58 PEWPDWAVDTF-VSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYG 828
P+WP+WA+D V +L +V Q+LY + + S ++V +F F+ KY++VYL +MLADW+QGT+MYTLY SY V+V LF+TGF S A+F FLG FVD+FGR+ CIV+C+LEV+INTLEH D +LL GRVLGGIST+LLFSAFESWM ++HRK GFPEEW++ T++ ++GNG MA+ AG+VAQ+ D LG IGPFQ A+ALT+LAL L++ WEENYG
Sbjct: 12 PDWPEWALDVLLVMAALLTVTIVITQYLYTSPEEKEETS------------------TNDVTSHADLKKKFDGFRRKYIIVYLVIMLADWMQGTHMYTLYLSYNVNVSALFITGFLSGAIFAPFLGSFVDKFGRKKSCIVYCVLEVIINTLEHSHDFGILLFGRVLGGISTNLLFSAFESWMTTEHRKSGFPEEWMSKTYADQSIGNGTMAILAGIVAQVLEDNLGQIGPFQG-----AIALTVLALILVLPWEENYG 246
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A7S2HXT6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HXT6_9STRA) HSP 1 Score: 265 bits (678), Expect = 3.890e-78 Identity = 136/265 (51.32%), Postives = 183/265 (69.06%), Query Frame = 1
Query: 58 PEWPDWAVDTFVSLS--LCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYGYGEEGK 846
P+WP WA+ ++ L ++L+ A + D+++ +G D A K+ D + F F+ KY+VVYL +MLADW+QGT+MYTLY SYGV++ LFLTGF S A+F FLG FVD+FGR+ C+V+C+LE++IN LEH+ + +LLLLGRVLGGIST+LLFSAFESWM ++HR FPEEWLA T+SAA++GNG MA+ AG+VAQ+ D+ G IGPFQ A+ALT LAL L++ WEENYG +EG+
Sbjct: 31 PDWPRWAMKMLFIMAGLLAVSLLMTALYTPDDEKIESDVKANGSDKENAA--KSSKDKTDIKTLH----GEFDSFRRKYIVVYLIIMLADWMQGTHMYTLYLSYGVNISALFLTGFLSGAIFAPFLGSFVDKFGRKRSCVVYCVLEIIINLLEHVTNFQLLLLGRVLGGISTNLLFSAFESWMTTEHRHRNFPEEWLARTYSAASIGNGAMAILAGIVAQVLEDQFGHIGPFQG-----AIALTALALILVLRWEENYGESKEGE 284
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A8J2EM06_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EM06_9DINO) HSP 1 Score: 265 bits (676), Expect = 5.430e-78 Identity = 137/262 (52.29%), Postives = 181/262 (69.08%), Query Frame = 1
Query: 55 SPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYGYGEE 840
S WP WA+ T +L + +V+ + + ++ + +A GD + + A FR FQ +YL VYLT+MLADWLQGTNMYTLY YGVD+G+LFLTGF S+AVFGTFLG++VD+ GRRNGCI+FC+LEV+IN LEH+ + LLL GRVLGG++TS+LFSAFESWMV++HRK FP+ L STF+ A+ GNG++A+ AGV+AQIAAD GDIGPFQ +A+ALT++ L ++ W EN G E
Sbjct: 17 STGWPSWALRTLTTLGVLTLGVVSTETIISARRSA-----------KASGDS-----------KESIPAGFRWFQLQYLSVYLTIMLADWLQGTNMYTLYDGYGVDIGSLFLTGFLSSAVFGTFLGIYVDKLGRRNGCIIFCVLEVIINVLEHVNNFPLLLFGRVLGGMTTSILFSAFESWMVTEHRKRKFPDSLLQSTFTFASAGNGLVAIKAGVIAQIAADISGDIGPFQ-----LAIALTVVTLGMVYFWPENTGDANE 251
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A7S3ZJB8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJB8_9STRA) HSP 1 Score: 263 bits (673), Expect = 7.440e-78 Identity = 127/195 (65.13%), Postives = 155/195 (79.49%), Query Frame = 1
Query: 259 ARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYGYGEEG 843
+ F FQ +YL VYL +MLADWLQGTNMYTLY YGV V TLFLTGFSS+ VFGTF+GL VD +GR+ C++FCLLE+ IN +EH+P M +LLLGRVLGGISTSLLFSAFESWMV++HR+ GFPE WLA TF ++ GNG +AV AG++AQ+AAD GDIGPFQ +A+ALT+LAL L++ W ENYG +G
Sbjct: 70 SEFNAFQREYLAVYLVIMLADWLQGTNMYTLYSGYGVSVSTLFLTGFSSSLVFGTFVGLLVDAYGRKRACVLFCLLEIAINAMEHVPSMPILLLGRVLGGISTSLLFSAFESWMVAEHRRRGFPEAWLAKTFGLSSAGNGAVAVVAGLLAQVAADVKGDIGPFQ-----LAIALTVLALVLILRWPENYGKTSDG 259
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A8J1W1L8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1W1L8_9DINO) HSP 1 Score: 264 bits (675), Expect = 1.660e-77 Identity = 138/270 (51.11%), Postives = 183/270 (67.78%), Query Frame = 1
Query: 19 MVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRSPPPSPSGVDGREAVGDKAGHDGVSEVVVEPAASARFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYG 828
M+ L++ + + WP WA+ T +L + +V A+ +A K G + V P FR FQ +YL VYLT+MLADWLQGTNMYTLY YGVD+G+LFLTGF S+AVFGTFLG++VD++GRR GCI+FC+LE++IN LEH+ + LLL GRVLGG++TS+LFSAFESWMV++HRK FPE+ L STFS A+ GNG++A+ AGVVAQ+AAD GDIGPFQ +A+ LT++ L+++ W EN G
Sbjct: 1 MIMSALEAHLIAATGWPQWALRTLTTLGVMTVSVVCAETF------------------QAARAKKDSGGDHQTGVIPKG---FRLFQLQYLSVYLTIMLADWLQGTNMYTLYDGYGVDIGSLFLTGFLSSAVFGTFLGIYVDKWGRRFGCIIFCVLEIIINLLEHVNNFPLLLFGRVLGGMTTSILFSAFESWMVTEHRKRNFPEKLLESTFSIASAGNGLVAIKAGVVAQVAADVAGDIGPFQ-----LAIFLTVVTLAMVWFWPENKG 244
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Match: A0A7S2CMX7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMX7_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.270e-77 Identity = 124/189 (65.61%), Postives = 158/189 (83.60%), Query Frame = 1
Query: 262 RFRRFQYKYLVVYLTVMLADWLQGTNMYTLYQSYGVDVGTLFLTGFSSAAVFGTFLGLFVDRFGRRNGCIVFCLLEVVINTLEHIPDMRLLLLGRVLGGISTSLLFSAFESWMVSQHRKLGFPEEWLASTFSAATVGNGIMAVFAGVVAQIAADKLGDIGPFQARRATVAVALTLLALSLLMLWEENYG 828
+FR FQ +YLVVYL +MLADWLQGTNMYTLY Y + +GTLFLTGF+S+AVFGTF+GL+ D++GR+ GC+VFC+LE++INTLEH P+ LL++GRVLGGISTS+LFSAFESWMV++HR +P+ WLAST + A+VGNGIMA+ AGV+AQIAAD GDIGPF+ +A+ LT +AL L+ +W ENYG
Sbjct: 66 QFRIFQLQYLVVYLLIMLADWLQGTNMYTLYDGYDMPIGTLFLTGFTSSAVFGTFIGLYADKYGRKLGCVVFCILEIIINTLEHYPNFALLMVGRVLGGISTSILFSAFESWMVTEHRARKYPDAWLASTNALASVGNGIMAIVAGVLAQIAADAYGDIGPFR-----LAILLTAVALVLISMWRENYG 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig647.17250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig647.17250.1 >prot_Ecto-sp13_S_contig647.17250.1 ID=prot_Ecto-sp13_S_contig647.17250.1|Name=mRNA_Ecto-sp13_S_contig647.17250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp MLAPMVRGGLQSLGLLSPEWPDWAVDTFVSLSLCCAVLVAAQWLYDNKQRback to top mRNA from alignment at Ecto-sp13_S_contig647:5893..14554+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig647.17250.1 ID=mRNA_Ecto-sp13_S_contig647.17250.1|Name=mRNA_Ecto-sp13_S_contig647.17250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8662bp|location=Sequence derived from alignment at Ecto-sp13_S_contig647:5893..14554+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig647:5893..14554+ >mRNA_Ecto-sp13_S_contig647.17250.1 ID=mRNA_Ecto-sp13_S_contig647.17250.1|Name=mRNA_Ecto-sp13_S_contig647.17250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1278bp|location=Sequence derived from alignment at Ecto-sp13_S_contig647:5893..14554+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |