mRNA_Ecto-sp13_S_contig6466.17245.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6466.17245.1
Unique NamemRNA_Ecto-sp13_S_contig6466.17245.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: D8LHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI)

HSP 1 Score: 575 bits (1482), Expect = 6.590e-205
Identity = 277/289 (95.85%), Postives = 280/289 (96.89%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDA 882
            CGKRWSAEHEGEEPVPPMPYWKWEPS+CRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFA    DATL QYDTLLVNAGAHRQLGGVEAYGSMIKTA ESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKG PEFEWTTI DKNTLLEEAF+ATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 
Sbjct:  150 CGKRWSAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAD---DATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDT 435          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5J9Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 3.340e-201
Identity = 271/288 (94.10%), Postives = 277/288 (96.18%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 879
            CGKRW+AEHEGEEPVPPMPYWKWEPS+CRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHV LKMDTYTACDGELTLSWYRND+LDTRLDGFDTPRCEEPDISISQCM +     DATL QYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLT+SMRRLHGD+AILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKG PEFEWTTIRDKNTLLEEAFDATHG TLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKV SD
Sbjct:   29 CGKRWAAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVKLKMDTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQCMTY-----DATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGRTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVNSD 311          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5J7J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE)

HSP 1 Score: 519 bits (1336), Expect = 2.270e-182
Identity = 247/294 (84.01%), Postives = 268/294 (91.16%), Query Frame = 1
Query:    1 RSRNRCGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHG-WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 879
            R+  RC +RWSAEH+G  PVPPMPYWKWEPS+CRLEEVDEAKFCRVM+GRKGLLFAGDSLTGEMIDTL AVLRAT VKHV L MDTYTACDGELTLSWYRNDFLDTR DGFDT  CE+PD S+S CMVFAGMYHDATL Q+DTL+VN+GAH + GG+EAYGSM+K A+ESLT+SMRRLHGDNAILVVRNTVPGHGESFDRMF GPV+LDTALDLV KG P ++WTT  D+N LLEEAF+AT+G WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD
Sbjct:  160 RTEKRCSERWSAEHDGVGPVPPMPYWKWEPSACRLEEVDEAKFCRVMEGRKGLLFAGDSLTGEMIDTLAAVLRATLVKHVPLTMDTYTACDGELTLSWYRNDFLDTRTDGFDTVHCEDPDASMSHCMVFAGMYHDATLTQFDTLVVNSGAHLRSGGLEAYGSMMKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 453          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5JU41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 6.770e-147
Identity = 216/344 (62.79%), Postives = 250/344 (72.67%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDS-------------------------LTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYH----------------------DATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDR-------MFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHG-WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDA 882
            CG+RWS EH+G+   PPMPYWKWEPS+CRLEEVD+  FC VM+GRKGLLF G+                          LTGEMIDTL  +LRATRV++V +   TY+ACDG LTLSWYRND+LDTR DGFDT  CE+PD+S S+C+VFAGM                        DATL Q+DTL+VNAGAHR+ GG+EAYGSM+K A+E LTSSMRRLHGDNAILVVRNTVPGHGES++R       MF+GPV++DTALDLVEKG P + W+T  DKN LLEEAF A HG WTLLDAYSPTILRADSH SA DGLHYC+PGPID+WVVLLYNILLE+V +  
Sbjct:   76 CGERWSEEHQGQGHAPPMPYWKWEPSACRLEEVDQISFCGVMEGRKGLLFVGEGRVVRRPKKDGLAVGRKNPASSTRQLLTGEMIDTLAVILRATRVEYVPMTGKTYSACDGALTLSWYRNDYLDTRTDGFDTVHCEDPDLSASRCVVFAGMASIKMEMVRAATMQCQPALMFIADDATLIQFDTLVVNAGAHRRSGGLEAYGSMMKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILLERVTNKV 419          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: D7G218_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 2.510e-118
Identity = 180/294 (61.22%), Postives = 198/294 (67.35%), Query Frame = 1
Query:    1 RSRNRCGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHG-WTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSD 879
            R+  RC +RWSAEHEGEEPVPPMPYWKWEPS+CRLEE D+AKFCRVM+GRKGLLFA D                                                                             ATL Q+DTL+VNAGAHR+ GG++AYG M+K+A+ESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMF GPV+LDTALDLV KG P ++WTT  D+N LLEEAF+ATHG WTLLDAYSPTILRAD HAS  DGLHYCLPGPIDHWVVLLYNILLEKVKSD
Sbjct:   19 RTEKRCSERWSAEHEGEEPVPPMPYWKWEPSACRLEEADKAKFCRVMEGRKGLLFADD-----------------------------------------------------------------------------ATLSQFDTLVVNAGAHRRSGGMKAYGLMMKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILLEKVKSD 235          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5JZZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 5.370e-86
Identity = 147/301 (48.84%), Postives = 201/301 (66.78%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDT-----YTACDGELTLSWYRNDFLDTRL------DGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAF--DATHGWTLLDAYSPTILRADSHASAT---DGLHYCLPGPIDHWVVLLYNILLEK 867
            C ++W+  H  EEP   MPY+ W+ + C LE+V+E KFCR M+GRKG+L  GDS+T  M+ TL +VLRAT  + VH K        + AC+GE+ +++YRNDFLDT        DGF   R  + +   +QC VFA    D TL++YDTL++N+GAH +   ++ Y   ++TA++ +T+SM+RLHGD+A+L+VRNT PGHG +  +R F GPV++DTALDLV  G  +++W      N +LEEAF  +AT GW  LDAY+PT+LR D H       D LHYC+PGPIDHWV LLYN+LL K
Sbjct:   88 CYQKWAEHHGSEEP---MPYYTWDAAECSLEDVNEEKFCRAMEGRKGILLVGDSITDLMVRTLVSVLRATP-EQVHSKYHLNHALKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRN---AQCEVFAD---DDTLKEYDTLIINSGAHPR--SLDEYREAMETASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAK 376          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: D7FL53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.150e-84
Identity = 146/300 (48.67%), Postives = 195/300 (65.00%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDT-----YTACDGELTLSWYRNDFLDTRL------DGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAF--DATHGWTLLDAYSPTILRADSHASATDG---LHYCLPGPIDHWVVLLYNILLEK 867
            C ++W+  H  EEP   MPY+ W+   C L+ VDE KFC  ++GRKG+L  GDS+T  M+ TL +VLRAT  + VH K        + AC+GE+ +++YRNDFLDT        DGF   R  + +   SQC VFA  Y   TL +YDTL++N+GAH +   ++ Y   + TA++ LT+SM+RLHGD+A+L+VRNT PGHG   +R F GPV++DTALDLV  G  +++W    + N +LEEAF  +AT GW  LDAY+PT+LR D H    D    LHYC+PGPI HWV LLYN+LL K
Sbjct:   87 CYQKWAELHGSEEP---MPYYTWDAVECSLDNVDEEKFCHALQGRKGILLVGDSITTLMVRTLVSVLRATS-EPVHSKYHLNHAHKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRN---SQCEVFADDY---TLEEYDTLIINSGAHPR--SLDEYRDSMGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAK 374          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5KFW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 2.890e-84
Identity = 142/296 (47.97%), Postives = 185/296 (62.50%), Query Frame = 1
Query:   13 RCGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRLDG-FDTPRCEEPD----ISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHG-DNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDA 882
            +C   W+     E    P PYW WEP+ C L+ V E K CRV++GRKGLL  GDSLT     TL ++LRA  +    L  D + AC G++ L + RND LDTR    + + RCEE      ++ ++C +FA    DATLR++DTL+VN+GAH +      +G  ++ +A++LTSSM+RLHG D AILVVRNTVPGH    +RMF  PVN   AL LV +    +EW +   +N  L++AF    GWTLLDAYSPT+LR DSH   +D LHYC+PGP DHW +LLYNILL      A
Sbjct:  119 KCQNIWNKRKRVEGETGPRPYWAWEPTKCSLDAVSEEKLCRVLEGRKGLLLVGDSLTRLSTTTLASILRAKSLT-ADLYKDDWEACGGKVKLRFMRNDVLDTRTKPRYRSVRCEESVGGALVNNTRCRIFAT---DATLREFDTLVVNSGAHPRPAA--EFGREMEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDSYEWDSFESRNVQLQKAFSPDRGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILLVAKNDSA 408          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: D7FL51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.210e-81
Identity = 138/296 (46.62%), Postives = 192/296 (64.86%), Query Frame = 1
Query:   16 CGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGRKGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYRNDFLDTRL------DGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAF--DATHGWTLLDAYSPTILRADSHASATDG---LHYCLPGPIDHWVVLLYNILLEK 867
            C ++W+  H  EEP   MPY+ W+ + C L+ VDE KFCR M+GRKG+L  GDS+T  M+ +   +  A +          + AC+GE+ +++YRNDFLDT        DGF   R  + +   +QC VFA    D TL++YDTL++N+GAH +   ++ Y   ++TA++ LT SM+RLHGD+A+L+VRNT PGHG +  +R F GPV++DTALDLV  G  +++W    + N +LEEAF  +AT GW  LDAY+PT+LR D H    D    LHYC+PGPIDHW+ LLYN+LL K
Sbjct:   89 CYQKWAEHHGSEEP---MPYYTWDAAECSLDNVDEEKFCRAMEGRKGILLVGDSITDLMVHSKYHLNHARK----------WGACNGEVKIAFYRNDFLDTTTRRSSFWDGFCDSRNPKRN---AQCEVFAD---DDTLKEYDTLIINSGAHPR--SLDEYRDSMETASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAILEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNMLLAK 363          
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Match: A0A6H5K9U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 3.880e-42
Identity = 72/132 (54.55%), Postives = 98/132 (74.24%), Query Frame = 1
Query:  490 IKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESF-DRMFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAF--DATHGWTLLDAYSPTILRADSHASAT---DGLHYCLPGPIDHWVVLLYNILLEK 867
            ++TA++ +T+SM+RLHGD+A+L+VRNT PGHG +  +R F GPV++DTA+DLV  G  +++W    + N +LEEAF  +AT GW  LDAY+PT+LR D H       D LHYC+PGPIDHWV LLY++LL K
Sbjct:    1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAK 132          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6466.17245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHR2_ECTSI6.590e-20595.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9Y7_9PHAE3.340e-20194.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J3_9PHAE2.270e-18284.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU41_9PHAE6.770e-14762.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G218_ECTSI2.510e-11861.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ9_9PHAE5.370e-8648.84Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FL53_ECTSI1.150e-8448.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFW9_9PHAE2.890e-8447.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL51_ECTSI1.210e-8146.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9U7_9PHAE3.880e-4254.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6466contigEcto-sp13_S_contig6466:88..3590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop1
Start0
Seed ortholog score79.7
Seed ortholog evalue2.5e-12
Seed eggNOG ortholog36080.S2K9M0
Model size885
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Mortierella verticillata NRRL 6337
EggNOG OGs1GTTD@112252,2DIAT@1,2S5Y9@2759,3A7BT@33154,3P5G3@4751
Cds size885
COG Functional cat.S
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463892.7409942-CDS-Ecto-sp13_S_contig6466:87..2561681463892.7409942-CDS-Ecto-sp13_S_contig6466:87..256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6466 88..256 +
1681463892.7515664-CDS-Ecto-sp13_S_contig6466:693..9241681463892.7515664-CDS-Ecto-sp13_S_contig6466:693..924Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6466 694..924 +
1681463892.7605283-CDS-Ecto-sp13_S_contig6466:1335..15341681463892.7605283-CDS-Ecto-sp13_S_contig6466:1335..1534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6466 1336..1534 +
1681463892.769563-CDS-Ecto-sp13_S_contig6466:2221..23181681463892.769563-CDS-Ecto-sp13_S_contig6466:2221..2318Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6466 2222..2318 +
1681463892.7786055-CDS-Ecto-sp13_S_contig6466:3401..35901681463892.7786055-CDS-Ecto-sp13_S_contig6466:3401..3590Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6466 3402..3590 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6466.17245.1prot_Ecto-sp13_S_contig6466.17245.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6466 88..3590 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6466.17245.1

>prot_Ecto-sp13_S_contig6466.17245.1 ID=prot_Ecto-sp13_S_contig6466.17245.1|Name=mRNA_Ecto-sp13_S_contig6466.17245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
RSRNRCGKRWSAEHEGEEPVPPMPYWKWEPSSCRLEEVDEAKFCRVMKGR
KGLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKMDTYTACDGELTLSWYR
NDFLDTRLDGFDTPRCEEPDISISQCMVFAGMYHDATLRQYDTLLVNAGA
HRQLGGVEAYGSMIKTAAESLTSSMRRLHGDNAILVVRNTVPGHGESFDR
MFTGPVNLDTALDLVEKGTPEFEWTTIRDKNTLLEEAFDATHGWTLLDAY
SPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILLEKVKSDA*
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mRNA from alignment at Ecto-sp13_S_contig6466:88..3590+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6466.17245.1 ID=mRNA_Ecto-sp13_S_contig6466.17245.1|Name=mRNA_Ecto-sp13_S_contig6466.17245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6466:88..3590+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCTCGCGAAACAGGTGTGGCAAAAGATGGTCAGCAGAGCATGAGGGCGA AGAGCCCGTACCCCCCATGCCGTACTGGAAGTGGGAGCCTTCGTCGTGCC GGCTGGAGGAGGTGGACGAAGCCAAGTTCTGCCGCGTTATGAAGGGGAGG AAGGGGTTGCTGTTCGCAGGTGAGAGCCACATGGCTACGTGAAGGACCAC CCCCGAAGGAACACTGCCGCTGGTGCACGGTGCTGTTGTGCATATGCCCG CTCAGAAGATACGAGTCGCGGAAATGGCGGGGGGGGTTAGGGGTGCACCC CTCGCCCAGGCGGAGGGGGGGGGGCGGGGGAAGACGTGCAAGGAAGGCGG GAAATTTCTCACCTGTACACCATTTCCTCTTCTCGCAAAGGCTAGGGGAA GATGATTTTTGGCATTGCCTGGTTTCACGTGCAAGGACACCACAAGATCT GACAGGATGGTCGGTGGATCTGCAAAGCCACAACCACCTATGCGTTCTCC TGCCCTGTGTGGAACTGAAGGTGCAGGCAGGTCTTGATAGGCACCGACGA CACTCAAACAACAACAACACCTTGTCTCCCCCCCTCCCATCCCCCCCCCC GCCTAGGGGACAGCCTGACGGGTGAGATGATCGATACTCTAAGGGCGGTC TTGCGCGCGACGCGGGTCAAGCACGTTCACCTGAAGATGGACACGTACAC AGCTTGCGACGGAGAGCTGACGCTGTCGTGGTACCGCAACGACTTCCTCG ACACGCGATTGGACGGCTTCGACACACCGCGCTGCGAGGAGCCCGACATC AGCATCTCGCAGTGCATGGTCTTCGCAGGCATGTACCGTCAGTCGTGGCC CCGATATAAGACGGGGGTCCTTATAAGAGGGGGCTCCCACGCAAGGGGGT CGGAAATTGGTTGTCACGGACTCGATCGGCATCAGGCATGTGCGCATCGT GCGGTTGGGAACCTCTAGCGTGCCTTGTCCCATCGGAGAAACACTTCTTC TCGCCTGTCGGTGTGCTCATAATGTTGTCGTTCGGAAGCCGCGGCTCTGA GTTGTTGGTGATATTGTTGCAGCTAGACCCACGATGGTGCAACAACAGCG TTCCGCGTTATCGTCTGCGCTCTGTCGGTGCCGAACGACATGGTAGCGTG ATTTTTTGTTATTCTCACAGATGATTCTGCCGTGAGCCAGCTCGGGATCG ATCCTGATAACGAAGTAACGTCAAGACTTCTCTCATCTTTACTCGCAGAT GATGCTACCTTGCGCCAGTATGACACCCTCCTCGTCAACGCTGGGGCACA CCGTCAATTGGGGGGGGTGGAGGCGTACGGGTCGATGATAAAGACCGCTG CCGAGAGCCTGACCTCGTCGATGAGACGGTTACACGGGGATAACGCCATC TTGGTGGTCAGGAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAGGTG GGAGACGGGTCAAGGGGATGTTGGCTTAGCCTTTTACGAAGGCTGAAAAA CTAGTTCAATTTTCATACGTGATGGCTTTGAGAGGCATGCGAACCTACGC CGTGGATATTTATTTTTCGAGGTCTTACACGCGGGACAGGTCGCCTGAAG TATTTCTACACAATCGTTTGTGTCTAGCTCGTCCCGCATCGAGCGTCGAT ATGTGCGTCGCGCGGTGATATCTCAACAGGTGCAGACCTAAACGGCGGGA GATTATTTTTTGGGGGCAATACAGGAAGCACGTGCTGTCATTCGTCGTCG CTTGTATCCATTGCTGTGCCTTGTAACCTGCCATAATTCTTGTAGCATTT CCGGCGTTGTTCACCTCCGGCGACATGTGGTGTGCAGAAGTTGTGTAGTG TGTTTCTTTTGCTTCACATCTCTCCGCTCCATAAAACGAAACCAGCAGTC CTGCCGAGCCCGAGCAGAGCAATGCTACCGCACGCGGTTCATTCGATTTC TTTCTTTGGCAGCCCAGGTTTTTTTCCACACCTATCTTTTTTTGGTCACG GCAACTGTTCCCCCCCCCACCAACTCGTATCTACACTTTGCTCCGCTGCC GAATACGAGGAGGAGGTTATTGTCGTGCCCGAAAGCTTGAGTTTCGACAA CGTTGTTTTTTGTGTGTGCCACTTTGCGTGACAGGATGTTCACCGGGCCT GTCAATTTAGACACGGCCCTCGACCTCGTCGAGAAAGGCACGCCGGAGTT CGAGTGGACGACAATTAGAGATAAGAACACGGTAAGGCTCTCGTTCTTTT TTTTTTTTTTTCACCGTCGTGTGTGAAGATTAATGGCAAAGGTCGGGGAG AGGCCTCAGAGTCGATCTTGCTTGTTGCGGGAGGGAGTCCAAGAAACTGC GCCGCGGGTACGCTGCGATAGGCTCGTCCTCACCTCTTGTGTTATGTTCA TATCAACGGAGTAGACTACTGTACACGGCAGCAGTGTTATTTCGTCGGTC TTGCTGATTGTTTAGCCCAGAACGTTGAAGAACCAGCCTTTCCAGGGTGC GAGTCGAGGTTAAAGATTTTAGGTGTTCTCGCCGGCTATTTCACCCCCAT CCTACTCCAAACCATGAGCCGAATCTAGACTCTAGCGTAGCCTTGTGGGA TGGTTACGATTGGCTGTCGTTCTGCTGCTCTTCTTATTTTCTCGGCAGGC AATGGGCGCCCTCGAAGAACCCTCATGGGTACCATACATATATATATTTT TTTTTGCATTCACACTTTTGCTCCGAAGCCGCTGCCCGTGTGCCCCTCTA GGCCCATTGAGCACATTTGCTCTTTTTTACATTCCTTGTGGTCCGTGAGG GCTGTTCGTTTTTTTCTTGTTCTCAATGTGCTTGTGTGTGTCTCTCTGCC GTAAGCATCGGCCGCACTATCCGGCTCACCAACGGCAAGACACCGCTCTC GCTGTAGCGGGACGAAACCTCGCGACTTCGCTTCCTTTTTTCCTAGTCCG CGGGTCCCCCGACAGGAGCGCTGCGGAGGAACTCGGGCTCGAGGGTCATG TCGCATAATATACACTTCTTCAGTTTTGTACGCAACTAGTGTGTGTCTTT TTCTTCATCTACACTGCTGTGTTACGAGAAAGACACATATCTATCGATGG ACTAGAGTCCACGGTCAACCAAGAGTTGACTTCATGATGGTGGCTGCTAA ATAGTCCACTGCTGTTTCTACTATTTTTCCGCAAATAGTATGGCATCTCA CTCTCCCCTGTGGGTAACAGGCTCAACCTCATATTCCTTGCAGAGTAGAT CGTGTTCTTAACGTTTGCGTGTGCGCCCGCTCTTGGATGTACCGTCTCTA TGTTCAAACCAAAGCTTCTGGAGGAAGCTTTCGACGCCACGCATGGCTGG ACGCTGCTGGATGCCTACTCGCCGACAATCCTGAGGGCAGACTCCCACGC CTCAGCAACAGATGGCCTGCACTACTGCTTGCCTGGGCCTATCGACCACT GGGTGGTTCTGTTGTACAATATTCTCCTGGAGAAAGTGAAGAGTGACGCA TAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6466:88..3590+

>mRNA_Ecto-sp13_S_contig6466.17245.1 ID=mRNA_Ecto-sp13_S_contig6466.17245.1|Name=mRNA_Ecto-sp13_S_contig6466.17245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6466:88..3590+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCTCGCGAAACAGGTGTGGCAAAAGATGGTCAGCAGAGCATGAGGGCGA
AGAGCCCGTACCCCCCATGCCGTACTGGAAGTGGGAGCCTTCGTCGTGCC
GGCTGGAGGAGGTGGACGAAGCCAAGTTCTGCCGCGTTATGAAGGGGAGG
AAGGGGTTGCTGTTCGCAGGGGACAGCCTGACGGGTGAGATGATCGATAC
TCTAAGGGCGGTCTTGCGCGCGACGCGGGTCAAGCACGTTCACCTGAAGA
TGGACACGTACACAGCTTGCGACGGAGAGCTGACGCTGTCGTGGTACCGC
AACGACTTCCTCGACACGCGATTGGACGGCTTCGACACACCGCGCTGCGA
GGAGCCCGACATCAGCATCTCGCAGTGCATGGTCTTCGCAGGCATGTACC
ATGATGCTACCTTGCGCCAGTATGACACCCTCCTCGTCAACGCTGGGGCA
CACCGTCAATTGGGGGGGGTGGAGGCGTACGGGTCGATGATAAAGACCGC
TGCCGAGAGCCTGACCTCGTCGATGAGACGGTTACACGGGGATAACGCCA
TCTTGGTGGTCAGGAACACCGTCCCGGGTCACGGCGAGAGCTTCGATAGG
ATGTTCACCGGGCCTGTCAATTTAGACACGGCCCTCGACCTCGTCGAGAA
AGGCACGCCGGAGTTCGAGTGGACGACAATTAGAGATAAGAACACGCTTC
TGGAGGAAGCTTTCGACGCCACGCATGGCTGGACGCTGCTGGATGCCTAC
TCGCCGACAATCCTGAGGGCAGACTCCCACGCCTCAGCAACAGATGGCCT
GCACTACTGCTTGCCTGGGCCTATCGACCACTGGGTGGTTCTGTTGTACA
ATATTCTCCTGGAGAAAGTGAAGAGTGACGCATAG
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