mRNA_Ecto-sp13_S_contig6465.17243.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6465.17243.1
Unique NamemRNA_Ecto-sp13_S_contig6465.17243.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: D7FKD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD1_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 1.070e-155
Identity = 219/228 (96.05%), Postives = 225/228 (98.68%), Query Frame = 3 
Query:    3 DVCVLSSGMKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDAEDTYEDTIVPAVG 686
            DVCVLSSG  +VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGI+WDDGCHFCGSSQCE+NTYDYTGQLIGGEGNGQDC+WPDSDCL+DGVE+QVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDA DTYEDTIVPAVG
Sbjct:   38 DVCVLSSGKTDVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGISWDDGCHFCGSSQCEDNTYDYTGQLIGGEGNGQDCYWPDSDCLQDGVEDQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDAGDTYEDTIVPAVG 265
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A835ZB01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB01_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.230e-53
Identity = 102/223 (45.74%), Postives = 136/223 (60.99%), Query Frame = 3 
Query:   18 SSGMKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVI---EDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGN---GQDCFWPDS-DCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDAEDTYED 665
            ++G + V +G  T+VCL+VN L ++     T YSQ+ I P AD FSRF + GSW+A       + DP+L  +G +V  HVES G  SFQK+FR      TFPL TAII+VD G +T ITWDDGCHFC    C+ NT+++ G     +G    G+DC++ D+  C+      QVS  CQL VYVVW+GTD  G FF S  KRL ++AG TV   +  AE T+ +
Sbjct:   38 TTGAELVKVGNTTAVCLIVNPLDYDT---ATNYSQISIFPAADSFSRFVIPGSWSAEYAASGTQTDPLLQKYGKDVAFHVESNGVASFQKSFRQASLGITFPLFTAIINVDRGNITSITWDDGCHFCARQFCQANTFNFAGTNTTADGQALGGKDCYYEDAKSCVN--ASGQVSDACQLEVYVVWSGTDRDGIFFQSQQKRLGLFAGPTVGQYLKTAEGTFNN 255
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A7S2R547_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R547_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.030e-37
Identity = 84/215 (39.07%), Postives = 120/215 (55.81%), Query Frame = 3 
Query:    3 DVCVLSSGMKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFG-TEVGVHVESMGKYSFQKAFRL---REEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGL 635
            + C +S+G K + IG+ T VC+ + G   E    +  +++    PD D+F+R  + GSW  S   +DD ++T  G TE+ +HVES  ++S+QK FR      ++ TFPL  A++ VDEG+V GITWD GC  C  S C +N Y Y G L   +    +C   D+ C         S+ C LTVYVVWTGTD  GN+  S  KRLS +   ++  L
Sbjct:   25 EACYVSNGEK-LAIGDSTWVCVTIGGFTSE---GVFNFTRSAFQPDLDDFTRLKISGSWG-SAAYQDDELMTMLGSTELYMHVESESEFSYQKLFRTTMDNGDQATFPLAVAVVDVDEGKVKGITWDTGCFDCEESSCTKNQYRYDGSLF--KDTHDECHKKDTQCS--------SSKCDLTVYVVWTGTDKNGNYLLSQQKRLSNFQMGSLSSL 224
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: W7TT05_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT05_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.070e-35
Identity = 79/214 (36.92%), Postives = 126/214 (58.88%), Query Frame = 3 
Query:    9 CVLSSGMKE-VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREE-EKTFPLHTAIISVDEGEVTGITWDDGCHFCGSS-QCEENTYDYTGQLIGGEGNGQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLIS 641
            C+   G+   VT  + T VC+V +   W+     + +S+V   P  D F+R     +++    +    +   +G  V VHVESMG  SFQK +R  +   +TF + TAII++D G VTGIT+D+GC  C +S +C ENTYD+TG+   G G   DCF  D++C  +   ++ +  CQL++Y+ WTGTD++GNF TS ++R S+ +  +V+  ++
Sbjct:   32 CLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGT--SNFSRVAFTPTVDRFTRLQFSDTFSN---LTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNA--CQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVN 238
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A7S4AKE4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKE4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.300e-32
Identity = 83/203 (40.89%), Postives = 110/203 (54.19%), Query Frame = 3 
Query:   24 GMKEVTIGEETSVCLVVNGLG-WEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQDCFWPDSDCLE--DGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGET 623
            G + VTIG+ T VCLV+   G W  +     Y ++   P AD +SRF V  S+      E + +   F   V VH ES    SFQK +    ++K FP  TAII+V +GEVTGITWDD C FCGS +CE+NT+ Y G++   E   Q    P   C    +  ++   A C L +YVVWTGTDSKG    S A R S +  ++
Sbjct:   70 GYEPVTIGKPTPVCLVLANNGDWSTEMT---YMRLNFKPLADAYSRFHVPQSFGQLVSTEQNALTEIFTGNVTVHAESQTALSFQKLY-YNGDDKVFPFLTAIINVHKGEVTGITWDDACVFCGSDECEDNTFRYDGEIATKEEARQ----PVGGCYNTVERCQSSKKAECDLILYVVWTGTDSKGRDMMSSANRFSAFPAQS 264
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A1E7ERI0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERI0_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.360e-31
Identity = 78/199 (39.20%), Postives = 107/199 (53.77%), Query Frame = 3 
Query:   24 GMKEVTIGEETSVCLVVNGLG-WEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQDCFWPDSDCLEDGV--ENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMY 611
            G + VTIG+ T++CLV+   G W  D +   Y ++   P AD++SRF V  S+        + +   F   + VH ES    SFQK +     +K FP  TAII+V++G VTGITWD+ C FC + +CE+NTY + G +        D   P   C    V  ++   A C L +YVVWTGTDS G  FTS A R S +
Sbjct:   59 GYEAVTIGQPTTICLVLASNGDWSTDME---YMRLNFQPIADDYSRFHVPDSFTQLIGSPKEALTKIFPGNITVHSESQTALSFQKLY-YNGADKVFPFLTAIIAVEKGNVTGITWDNACVFCANDECEDNTYGFNGGIA----TEADAQQPVGGCHSSVVACKDSAEAECDLMLYVVWTGTDSNGKDFTSSANRFSAF 249
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A8K1CV35_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV35_PYTOL)

HSP 1 Score: 119 bits (297), Expect = 1.370e-26
Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 3 
Query:    6 VCVLSSGMKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDY----TGQLIGGEGNGQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDAEDTYEDTIVPA 680
            +C  S+   ++T GE T VC+ VN              + L +P  D+F+   V  SWN +R+  D   L +F T     V +M   S  K +   E    +P  TAI+SV +GEVTG+TWDDGC+FC  S CE N+Y Y    + QL G    G  CF   S C         +  C LT+YV WTGTDS G++ +S   R+S +A  ++         ++ ++ +PA
Sbjct:   33 LCSPSATPPKITKGERTYVCVNVNDK-----------YRTLFMPVTDQFTVLRVTDSWNDTRIGGD--ALGSFVT-----VSTMAMRSTYKLYA-SERGHIYPYMTAIVSVKKGEVTGVTWDDGCYFCDHSMCEPNSYRYPTNVSSQLTG---EGYTCFNQMSSCSGTN-----ATACDLTIYVGWTGTDSNGDYLSSAGMRMSQFAKYSITSYFKKLASSF-NSFMPA 233
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A1Z5KI04_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI04_FISSO)

HSP 1 Score: 119 bits (299), Expect = 2.030e-26
Identity = 71/211 (33.65%), Postives = 112/211 (53.08%), Query Frame = 3 
Query:   27 MKEVTIGEETSVCLVV-NGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQD---CFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLISDA 647
            ++++ IG++T VC  V N   W    D   Y ++   P+AD++SR  +  S+N   V+E + +   +  +V +   +  K  F + +    E + FP  TAII V +G V G+TWDD C FC S +C E TYD+ G       +GQ    C   + +C  + + ++   LC LT+YVVWTGTD+ G  F S A R S +  + +   +S+A
Sbjct:   46 LEKIEIGKQTIVCFHVGNTKDWARGVD---YIRLSFQPEADQYSRMHIPNSFN-DLVVESETVF--YQRDVTIAAAAQDKSGFLRVYYDAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFCSSDKCAEITYDFNGVQQTQATSGQPTRGCEITEDEC--NVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFSRFPPQELSDRVSNA 248
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: F0WG02_9STRA (Uncharacterized protein AlNc14C86G5535 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG02_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.270e-22
Identity = 75/204 (36.76%), Postives = 96/204 (47.06%), Query Frame = 3 
Query:    3 DVCVLSSGMKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYD-YTGQLIGGEGNGQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMY 611
            +VC  S+    V  GE T VC+ +N    E  A  T        P AD+FS  S++ SWN SR I  +P          V V S+G  +  K  R   E   FP  TAIISV +G V G+TWDDGC FC    C  N Y   T   +     G  C+   S C      N   + C LT+Y+ WTGTD  GN+ +S   R+S +
Sbjct:   27 NVCSPSTAFPPVVQGELTWVCININN---EFRAVFT--------PTADKFSVISIRESWNDSR-IGGNP------EGASVSVSSLGNRTLYK--RYAHENVRFPYLTAIISVKQGLVQGVTWDDGCFFCSRDACLPNLYSSITNTSLQLPHQGFSCYTNTSIC------NDTVSACDLTIYIGWTGTDKDGNYLSSAGLRMSQF 204
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BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Match: A0A2D4C851_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C851_PYTIN)

HSP 1 Score: 107 bits (267), Expect = 1.370e-22
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 3 
Query:   36 VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEK--TFPLHTAIISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGN-GQDCFWPDSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMY 611
            VT G++T VC+ VN              + + +P AD+F+ F +  SWN +R+  D           G ++ ++   + + A++L   +    +P  TAIISV +G+V G++WDDGC+FCGS  CE N Y +   +       G  C+   + C      +     C LT+Y+ WTGTDSKGN+ +S   R+S +
Sbjct:   41 VTKGQKTFVCVNVNDK-----------YRTVFMPVADQFTVFRIANSWNDTRIGADP---------AGAYL-TISSMAMRSAYKLYASDAGHIYPFLTAIISVKKGQVQGVSWDDGCYFCGSEMCEPNLYRFASNVSSRVAKEGYTCYNNVATCSGPNATS-----CDLTIYIGWTGTDSKGNYLSSAGLRMSQF 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6465.17243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FKD1_ECTSI1.070e-15596.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB01_9STRA3.230e-5345.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R547_9STRA2.030e-3739.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TT05_9STRA2.070e-3536.92Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S4AKE4_9STRA1.300e-3240.89Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7ERI0_9STRA2.360e-3139.20Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A8K1CV35_PYTOL1.370e-2634.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Z5KI04_FISSO2.030e-2633.65Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
F0WG02_9STRA1.270e-2236.76Uncharacterized protein AlNc14C86G5535 n=1 Tax=Alb... [more]
A0A2D4C851_PYTIN1.370e-2232.31Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6465contigEcto-sp13_S_contig6465:2850..7968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score443.0
Seed ortholog evalue8.4e-122
Seed eggNOG ortholog2880.D7FKD1
Model size1999
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2AMNC@1,2RZCH@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_005750.1
Cds size663
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6465.17243.1prot_Ecto-sp13_S_contig6465.17243.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6465 4160..7942 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463892.6060255-UTR-Ecto-sp13_S_contig6465:2849..41591681463892.6060255-UTR-Ecto-sp13_S_contig6465:2849..4159Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6465 2850..4159 -
1681463892.680484-UTR-Ecto-sp13_S_contig6465:7942..79681681463892.680484-UTR-Ecto-sp13_S_contig6465:7942..7968Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6465 7943..7968 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463892.6189976-CDS-Ecto-sp13_S_contig6465:4159..42281681463892.6189976-CDS-Ecto-sp13_S_contig6465:4159..4228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6465 4160..4228 -
1681463892.6317847-CDS-Ecto-sp13_S_contig6465:5011..51371681463892.6317847-CDS-Ecto-sp13_S_contig6465:5011..5137Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6465 5012..5137 -
1681463892.6462479-CDS-Ecto-sp13_S_contig6465:6290..64341681463892.6462479-CDS-Ecto-sp13_S_contig6465:6290..6434Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6465 6291..6434 -
1681463892.655815-CDS-Ecto-sp13_S_contig6465:7030..72061681463892.655815-CDS-Ecto-sp13_S_contig6465:7030..7206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6465 7031..7206 -
1681463892.667864-CDS-Ecto-sp13_S_contig6465:7794..79421681463892.667864-CDS-Ecto-sp13_S_contig6465:7794..7942Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6465 7795..7942 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6465.17243.1

>prot_Ecto-sp13_S_contig6465.17243.1 ID=prot_Ecto-sp13_S_contig6465.17243.1|Name=mRNA_Ecto-sp13_S_contig6465.17243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MKEVTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGS
WNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTA
IISVDEGEVTGITWDDGCHFCGSSQCEENTYDYTGQLIGGEGNGQDCFWP
DSDCLEDGVENQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETV
EGLISDAEDTYEDTIVPAVG*
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mRNA from alignment at Ecto-sp13_S_contig6465:2850..7968-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6465.17243.1 ID=mRNA_Ecto-sp13_S_contig6465.17243.1|Name=mRNA_Ecto-sp13_S_contig6465.17243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5119bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6465:2850..7968- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATGTGTGCGTCCTCTCCTCCGGAATGAAGGAAGTGACGATCGGCGAA
GAGACGTCGGTGTGCCTGGTGGTGAACGGCCTGGGCTGGGAGGTGGACGC
GGACCTGACGTTCTACTCGCAGGTCCTCATCCTGCCCGACGCTGACGAGT
TCAGCCGTTTTAGCGTCAAGGGATGTGAGTAGTAGGAGTAGCCGAGCGGT
CCGCTGTGCTCGTTTGGTACGCCCGCGCGCAAGTGTGCGGGCTGGTTTCG
TGTGTTGATAGTTTTCTGGCACAGCCCTCCAGGCGACCGATCCCGCGTTG
TGATTTGCCGCCTGGATTATTGTCGGTAGCAGCGAAGTCAGGTTTTGGAC
CAACAGTATTTGTTTCTTCCTGCGGTTGGACATGCGTCGGCGGTAGACTT
GCCACTAGAGCGGACCGGTCCTCGAAGTGCAGTGCTGTGGGCACGAGCAC
CTTTCGACAACCTCGGAGCCGTTCTTCCGTGCTTGAACGAGTATCGTCCG
ACTACCTTGGAGCGCTTTCGCTTTGCCTTTCACAGTTACGCGATGGTCAA
ACGATCACTACGCGCTACATCGCAGGTCTTGATTTCCGCGCCTGTTCCCA
GGCGGCCGCTCTTGTGTCGGGAGGAAACGCCATCACCCACCCGCTCACTT
TTATGCACGAAAAGTATCGCCATGATTGTGTACCAGATATGTAAGTACCC
TTGTGTGTCCTCTTGCCGCGCCAACGGCGGGACCCGCTGCTCTGGTTTGC
TGCTGTCGGCAGCATGGAACGCCTCGAGAGTGATCGAGGACGACCCCATC
CTTACGACGTTTGGAACCGAGGTCGGGGTGCACGTGGAGAGCATGGGGAA
GTACTCGTTCCAGAAGGCGTTCCGGTTACGGGAAGAGGAGAAGACGTTTC
CTCTCCACACGGCCATCATCTCTGTCGACGAGGGAGAGGTGAGGCGGCGG
GCTGAGGAGAGATATGTGCCGAAGGGGGACTAGGTGGGGGTATAGATGGA
AATGGGGGGAAGAGCGCAGGAGCGGGGGGAATCACGAGAGCGAGAGAGAG
AGAGAGGGGGGGGTGGACGAAAACACGTGGGCAGATGGCGGTTTGGGTAG
TGCAGCGGGGGGTGGAGTGGCAGTATGGGTGGGGAAGAATCCGAATAAAT
CAACCGCATTCGCTCACACGGCAAAGACAAGAAGACATGTGTCACTTGGA
GCCCTTAACAATGGTGCGAAAAGTCACAGTAGACTTCGCAGGTTATTTCG
TATCATATTAGCTAAACATGTTGGATAACGCACACAATCGGGGAAGTTGA
TGTAGGGTTAGGGTTATAGGGAATAGGGTTTGCGTTCCCCCTCCTAGTTC
TATTTCCTCATTAACTTATCCATCGCGCGAAGGCCGTCTAAAAGTCGTCA
GGATGTGAGCAACCCTCCTCTCCGAAGTGTCCACGACCCTTTTCTCTCAA
CACTGGTGCGAATAGTCGTCATGGCGTTACTTCCAAAACAATGCTCCTCT
CAGAAGTGCTTCCCCTCTCCCTCCGTCGTGCCAGGTGACCGGTATTACGT
GGGACGACGGGTGCCACTTCTGCGGCTCTTCCCAGTGCGAGGAAAACACG
TACGACTACACGGGACAGCTCATAGGCGGAGAAGGCAACGGCCAGGACTG
CTTTTGGCCCGACTCGGATTGTCTCGAGGTGCTGAAGCCAGAATCGTGGG
GGTTGGTGATGTGTGATGTCGACTTACTGTCTCTGCCAGTTGCCCCCCCC
CGAGATGGCAAAGAATGTTCAGGCGCCCTGAGGCACAACTAGCGCCATGG
AGATGGATACGTCGATGCGCTTGACGTTGTTTGTGCAACCCAACCCAGTC
TGTCTGTTCTGGGGCGCGTCGAGGGCTGCTTCCCTTACGCATACAGTACA
ACCTTATCGAATGCTCAATTTTGTCCGAGTTTTTGTTAAGGCTGTGTTGC
GCCACGTATCGCAGAGCAACGAACGACGTGTCGGATACGTACTGCATATA
CTTCACAGATTGCAATAGTTCCGACTGACGTCGGTCCGACCTGCAAACAG
GCCGGTCGTGAGCCGCGTAGAGCTCCGGTGACAGCGCAGCGCCCTGGGGC
CCCGATATCTCTTGTACAGTTGGCGCACGCACTTAAGCTAGGAACTTGGC
AGTCAAGAGAACTTGGCACTGTTGAGAACTTGGCAGTCAGTTGAGCAATT
GATATAGCCTCTAAAACTCAGTATCTGAAGAACTTGAGCACTTTTTTGTA
AGCTCGGTTGAGAACTCCCTTTTTGCACTGAAATCTACATTGCGGCCATT
TGCAGCATAGCCCTAGGGACCGAGAACCCCAGCCTCGGCCCGAAAGTAGA
TCGAGGTTCTCGAGTGCTGGCGCTTCCGCTATGACAAACAATCGGGTAAC
GTTTGGGTGTTGAGGGCCCGTGGACGATGCGTTTCCCCTGGGCGCGGCTG
ACACTTGCGGAGGCATGATCGCCCTCTATCGTCTTCCCCCTCGCCGTGTA
ACGCTCAGGGTGGCTCGATTTTTTGAAGGAAAACCTTTTTTTACCCCTCT
TTTTTCTTACTAGTGGTTGCCGAATGTGATCAAGTTTACTTGGTCGTTTT
GATTGATGCGCTCTGGCGTGGTTCAGGAGCGGCGGAGCAAGCATCCAGGT
ATGGCTGGCTGGGCCTCGCGGACAGATGCAATGTGTTGTCAGAGCTATAA
CAAGCCGTGACTGCCGCCCTCGCTCTCTGTCACAACTGCCTTGCTCTTGC
TCTCTGACGATTGCCTGTGTTTTGCTCTCCACGAATTTGCTCTTGTTCGC
GCGAATCCGTTGTTCACTTCTGGGTGGGCAGGACGGGGTTGAAAATCAAG
TGAGCGCCCTGTGCCAGCTGACAGTCTATGTGGTGTGGACAGGGACCGAC
TCGAAGGGGAACTTCTTCACCAGTTTCGCGAAACGCCTGTCTATGTATGC
GGGGGAGGTGAGCCTCGTAGGTGGTCGTTGTTTTGTGACACTTATACCTG
TATGCTTGAAGCGGCCTTGTCCTGGCAACATGGAAGGACGGAAACGAGCG
TTGCTACCATGTTGTTGCCCATGCACTTGCCGGCATTGTCGATGTTGTCG
GAAAGCTCCTCCAGAATTCAGAGGCTTGGGACGGTAACATTAAGGATGGG
ACCCCCCACTTGCTCTTTGAAATTCGTGGAAAGTATGGTATTATATTGCG
TGCAGGGAACCCTCATCCACCTGGTAGGATAGTTCGGGGGTCTATGCATG
GCTTTTGGGAAACGACTATGAAGTCACCTTTTACAGCCTGGAGACCCGTA
GACAAAGGGGGCAGGGAGAGAGCCAAACAGGCCGGGCACCCGCAGCAGCG
CCTAGAAGCAGAACGGCTTTCCCTGTCGACGTTCTTGCTAGGGAATGTTG
AAATAGTGATTTGCTCTCTTCCTCGCGTAAGGTTCTTGAGCGGCGGACCG
TGTTGGTGCTGGCCGCTACAACACGAAAGCGACGAAGTTTTGGCTTTGTC
CGTGCCTGTGTTTTTCGTGTTTTCGGCGAAAGGTGCGACAAACTGGTCTG
GACAGACAGCTGCTACAAATACAAACGCTGACTCGTCTTCACAGTTTCGA
CGGCTGATGACCAGCAAAATTCGAATGTCCAAACTGCTCTTGCTCCGTCC
CAATAGCATTTTCCCATCGCTGTTTGTTGCGCCCCATTGTGCTCGACGCC
CTGGATGGTTCCCCCCGCACCCCCTTCTTGCGCTCGACAGACGGTAGAGG
GTTTGATCAGCGATGCGGAAGACACGTACGAGGACACGATCGTGCCTGCT
GTTGGGTAGGGATAGACCAAGAGCTAGCTCGATTTTCGGATGCACGCTTT
CTGCGATGATGTATTTCATCGGTCCCGTGATGTGTGTGTGTTTCTTTCCC
GAAAGCCTCTTCTGCGTTGCGGACCTCTAGCGCGCTCTTCGAACACGAAA
AATACGCGAATGGAAACCATCCCTGGTTCGTTTTTTTCTCTCGTTTCTCG
CGTTTTCCTGCTGGCGAACGAGAACTCTCGCCAGGGGGATGCACGCCAGC
GTGAACATCGTTGTGTGATACTCCTGTTGTTGGTATAGTTATTGTTGACG
TGACGTACTGTTGTGTTCTTTGGCATTTCGAGACGATGCAATCTTTTCTG
CGGGCGGTTTGTTTCGAAGGCAACACAGACAGACGAACCCAAGGCACAAC
AACGTGTGGTGTCTTCAGTATTTATTTGTTTTTCCAGCTGCCCCAACGCG
CCCGGTGTCTCTATCCCCCCGCGCCTTCCAGACTGGGCTTTTCTTTTTTT
TTGGTTGTGGTGTTCCTCTTTTTCGTTGACGCGCCCCAGTCTTTCTTCCG
TGTTAGACGGCTAGCGTAATCCGTAAGCTTTGTTGGGTCTATGCCCGTTG
TTGGCCGACTTGTCATTCCTGTTGTGATTTTTTTTTTTTGTGTGGCGTGG
GAGGAAGGGCGCCAGCCACTGCTGTCGTCACAGTGGAAGCAAGCAAATAC
GGCCTGTTTCGTGTGCCGTTCATGTAGCCAAATCGACGGACATGATTGCC
TTGTCTCAGGGTGTGATCATGCGCTTTACTCCTCTCCGCGTCCGTTGTTG
TAACATTAGACGAGTACCATAGTCAGCCCTGTCTACTTCAGTTTAAATAG
GTGCTCTCGAGGCCCGCTTGCTGTTGGGCTTGGAAAGGGGGCGTATCACA
CTGAATGTCACGCAAGGCATCGAGCTGATGCTCTGTGTTTTTTTTTGGTT
TGGTTGCCGGTGTCAATGAGAATCTCATCTGTAGGAACAACGGGTGTTTG
CGTGTGTGCTGGGAAACCGGTTTGCCCCCCCCTGCTCTGTTTGAGACAAC
TGGCTCATCGTGTTGTTCGTGCTGTGCTGCCCCCTTGCTGGCCGCCATGG
TCGACGATGTGGTTTCCTCGCCACATGGCAGAGTTGGGAAGAGAACAACA
GACTTACAGGTTTTTGCTCTTTGAAAGGAATGATGGTGCGATGTGGCAAT
GGTATTTATACATCGTCGTAGGCTGACTGCTGCTTGACAGCTTTCATTTG
TTGTGAAGAGAGAGAGAGAGGCAAGATGGTGAAGAAAGTAGCTCTCATGT
GGCTAGCTGGCCAGAGAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6465:2850..7968-

>mRNA_Ecto-sp13_S_contig6465.17243.1 ID=mRNA_Ecto-sp13_S_contig6465.17243.1|Name=mRNA_Ecto-sp13_S_contig6465.17243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6465:2850..7968- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGAAGTGACGATCGGCGAAGAGACGTCGGTGTGCCTGGTGGTGAA
CGGCCTGGGCTGGGAGGTGGACGCGGACCTGACGTTCTACTCGCAGGTCC
TCATCCTGCCCGACGCTGACGAGTTCAGCCGTTTTAGCGTCAAGGGATCA
TGGAACGCCTCGAGAGTGATCGAGGACGACCCCATCCTTACGACGTTTGG
AACCGAGGTCGGGGTGCACGTGGAGAGCATGGGGAAGTACTCGTTCCAGA
AGGCGTTCCGGTTACGGGAAGAGGAGAAGACGTTTCCTCTCCACACGGCC
ATCATCTCTGTCGACGAGGGAGAGGTGACCGGTATTACGTGGGACGACGG
GTGCCACTTCTGCGGCTCTTCCCAGTGCGAGGAAAACACGTACGACTACA
CGGGACAGCTCATAGGCGGAGAAGGCAACGGCCAGGACTGCTTTTGGCCC
GACTCGGATTGTCTCGAGGACGGGGTTGAAAATCAAGTGAGCGCCCTGTG
CCAGCTGACAGTCTATGTGGTGTGGACAGGGACCGACTCGAAGGGGAACT
TCTTCACCAGTTTCGCGAAACGCCTGTCTATGTATGCGGGGGAGACGGTA
GAGGGTTTGATCAGCGATGCGGAAGACACGTACGAGGACACGATCGTGCC
TGCTGTTGGGTAG
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