mRNA_Ecto-sp13_S_contig64644.17242.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig64644.17242.1
Unique NamemRNA_Ecto-sp13_S_contig64644.17242.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A6H5JJU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 5.520e-36
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSNIDIMTFETSCNVA NTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM
Sbjct:  351 VSNIDIMTFETSCNVATNTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 414
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A2P4YB31_9STRA (Lysophospholipid acyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YB31_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.160e-26
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYYLFFM
Sbjct:   56 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 119
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: M4B542_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B542_HYAAE)

HSP 1 Score: 103 bits (258), Expect = 4.280e-25
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  198 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 261
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A835Z8U4_9STRA (MBOAT, membrane-bound O-acyltransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 8.000e-25
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            V+N+DI+ FET+ N+  N+RAWNK TQ WLE+YVY RT NSL ATYFVSAFWHGFYPGYYLFFM
Sbjct:  341 VNNMDIIDFETAENMTGNSRAWNKMTQSWLEKYVYTRTNNSLMATYFVSAFWHGFYPGYYLFFM 404
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A7S2USG4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USG4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.270e-24
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:    4 SNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            SN+DI+ FE   NV+ N+RAWN+RTQGWLERYVY RT +SLTATY VSAFWHGFYPGYYLFF+
Sbjct:  387 SNMDILGFELGGNVSENSRAWNQRTQGWLERYVYARTNSSLTATYAVSAFWHGFYPGYYLFFL 449
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A3M6VA33_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA33_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.420e-24
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  333 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 396
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A0P1AIL7_PLAHL (Lysophospholipid acyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIL7_PLAHL)

HSP 1 Score: 103 bits (258), Expect = 1.420e-24
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  333 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLIATYFISAFWHGFYPGYYLFFM 396
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A2P4X757_9STRA (Lysophospholipid acyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X757_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.630e-24
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  388 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 451
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: D0MV88_PHYIT (Lysophospholipid acyltransferase, putative n=15 Tax=Phytophthora TaxID=4783 RepID=D0MV88_PHYIT)

HSP 1 Score: 103 bits (256), Expect = 2.200e-24
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTGNSL ATYF+SAFWHGFYPGYY+FFM
Sbjct:  333 VSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYIFFM 396
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BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Match: A0A2D4C7B3_PYTIN (Lysophospholipid acyltransferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7B3_PYTIN)

HSP 1 Score: 103 bits (256), Expect = 2.850e-24
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 VSNIDIMTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 192
            VSN+DI+ FE + +V   +RAWNK TQ WLERYVY RTGNSL ATYFVSAFWHGFYPGYYLFFM
Sbjct:  344 VSNMDIVGFEFAQSVREGSRAWNKGTQNWLERYVYTRTGNSLMATYFVSAFWHGFYPGYYLFFM 407
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64644.17242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJU3_9PHAE5.520e-3698.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4YB31_9STRA3.160e-2675.00Lysophospholipid acyltransferase (Fragment) n=1 Ta... [more]
M4B542_HYAAE4.280e-2575.00Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A835Z8U4_9STRA8.000e-2575.00MBOAT, membrane-bound O-acyltransferase family-dom... [more]
A0A7S2USG4_9STRA1.270e-2476.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3M6VA33_9STRA1.420e-2475.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A0P1AIL7_PLAHL1.420e-2475.00Lysophospholipid acyltransferase n=1 Tax=Plasmopar... [more]
A0A2P4X757_9STRA1.630e-2475.00Lysophospholipid acyltransferase (Fragment) n=1 Ta... [more]
D0MV88_PHYIT2.200e-2473.44Lysophospholipid acyltransferase, putative n=15 Ta... [more]
A0A2D4C7B3_PYTIN2.850e-2476.56Lysophospholipid acyltransferase, putative n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64644contigEcto-sp13_S_contig64644:5..745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score94.4
Seed ortholog evalue2e-17
Seed eggNOG ortholog272952.HpaP801392
Preferred nameMBOAT1
Model size195
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K13146,ko:K13517,ko:K13519
KEGG ReactionR01318,R02241,R03437,R04480,R09034,R09035,R09036,R09381
KEGG Pathwayko00561,ko00564,ko00565,ko01100,ko01110,map00561,map00564,map00565,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006575,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006658,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007009,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008150,GO:0008152,GO:0008354,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016411,GO:0016477,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0036150,GO:0036151,GO:0036152,GO:0040011,GO:0042171,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046486,GO:0047144,GO:0047184,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0061024,GO:0071617,GO:0071704,GO:0071840,GO:0090407,GO:0097164,GO:0098827,GO:1901564,GO:1901576
Exons2
EggNOG free text desc.MBOAT, membrane-bound O-acyltransferase family
EggNOG OGs3Q8MW@4776,COG5202@1,KOG2704@2759
EC2.3.1.23,2.3.1.51
Cds size177
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463892.5513875-CDS-Ecto-sp13_S_contig64644:4..841681463892.5513875-CDS-Ecto-sp13_S_contig64644:4..84Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig64644 5..84 -
1681463892.5660937-CDS-Ecto-sp13_S_contig64644:630..7271681463892.5660937-CDS-Ecto-sp13_S_contig64644:630..727Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig64644 631..727 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463892.577446-UTR-Ecto-sp13_S_contig64644:727..7451681463892.577446-UTR-Ecto-sp13_S_contig64644:727..745Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig64644 728..745 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64644.17242.1prot_Ecto-sp13_S_contig64644.17242.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig64644 5..727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig64644.17242.1

>prot_Ecto-sp13_S_contig64644.17242.1 ID=prot_Ecto-sp13_S_contig64644.17242.1|Name=mRNA_Ecto-sp13_S_contig64644.17242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MTFETSCNVAINTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFY
PGYYLFFM*
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mRNA from alignment at Ecto-sp13_S_contig64644:5..745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig64644.17242.1 ID=mRNA_Ecto-sp13_S_contig64644.17242.1|Name=mRNA_Ecto-sp13_S_contig64644.17242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=741bp|location=Sequence derived from alignment at Ecto-sp13_S_contig64644:5..745- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAGCAACATTGACATCATGACCTTCGAGACCTCCTGCAACGTGGCCAT
CAACACCCGGGCGTGGAACAAGAGGACCCAGGGCTGGTTGGAGCGCTACG
TCTACATGCGCACAGGTACGATACGGGGTCTTGATCGCGAGCTCGCGGCG
ACCACGTTCCCCTGCTCCTGATGGGCAGGCCAAAGTGTTTAACACCACCG
CGGCGTCATGTCGTCAGCAGGGGAAGCAGTAGTTTTGCTGACCCACCCTA
CCCACAGCGCAGAAGTACGAGATTCTCTCGTTTGGTCATGTTGTGCCGCG
TTTTTTCGGGCCGCTGTCGTCGTCAGGTTGGCAGACGCTTCGAGTAGAAC
ACGGCCATGGCTCTACATCCTATTTACGCATTGCCATGAGAGGTGTTCGC
GACTTGTTGTTCGTCTGCGCCGTCGCTGTGTTTGTATTTGCGTCGCTGAG
GGGGTTGCGTTTGCGGAGCGAGCCCCCAACCCCCCCTCTCACCGCTATTT
AGTGTCGTTTCACTCGCCAAGGGAGGTCTATGTCTTATTTTTTTTTTCTG
CATTTTCGAGTCTTGACGTCATGTATCCCACACCATCGTCTGTCTTCATC
CCCTCTGCGCTCGCCTGTTTCTTGTGTTTCGCCTGTTTTCTGGATGTGTG
GTTGGGTGCAGGCAACAGCTTGACCGCCACGTACTTTGTGTCGGCATTCT
GGCACGGATTCTACCCCGGCTACTACCTGTTCTTCATGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig64644:5..745-

>mRNA_Ecto-sp13_S_contig64644.17242.1 ID=mRNA_Ecto-sp13_S_contig64644.17242.1|Name=mRNA_Ecto-sp13_S_contig64644.17242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig64644:5..745- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCTTCGAGACCTCCTGCAACGTGGCCATCAACACCCGGGCGTGGAA
CAAGAGGACCCAGGGCTGGTTGGAGCGCTACGTCTACATGCGCACAGGCA
ACAGCTTGACCGCCACGTACTTTGTGTCGGCATTCTGGCACGGATTCTAC
CCCGGCTACTACCTGTTCTTCATGTGA
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