prot_Ecto-sp13_S_contig6459.17232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6459.17232.1
Unique Nameprot_Ecto-sp13_S_contig6459.17232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A6H5JUD9_9PHAE (Methionine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUD9_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 9.090e-81
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0
Query:    4 DYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            DYHILVKGNNDMLSITQPHIIKEIH KYLDSGSDIIGTNTFS+TTIAMADYEMEKDVYELNFESARLAR+ACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG
Sbjct:   86 DYHILVKGNNDMLSITQPHIIKEIHTKYLDSGSDIIGTNTFSATTIAMADYEMEKDVYELNFESARLARKACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 216          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: D7FUT0_ECTSI (Methionine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT0_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 2.080e-79
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0
Query:    1 MLQDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            MLQDYHILVKGNNDMLSITQPHIIKEIH KY+DSGSDII TNTFS+TTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG
Sbjct:    1 MLQDYHILVKGNNDMLSITQPHIIKEIHTKYVDSGSDIIATNTFSATTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S3PSC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSC6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 5.570e-62
Identity = 95/132 (71.97%), Postives = 113/132 (85.61%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +D+   VKGNND+L++TQP +IK IH +YL+SGS +IGTNTFSSTTIA ADYEME   YELN+  A+LAREAC+E TAKDPTKPRFV+GA+GPTNRTGSISPDVEDPS RNVTFDELV +Y ++  GL+DGG
Sbjct:   11 KDWTTNVKGNNDLLTLTQPEVIKGIHVQYLESGSRLIGTNTFSSTTIAQADYEMESLAYELNYYGAKLAREACDEMTAKDPTKPRFVVGAIGPTNRTGSISPDVEDPSVRNVTFDELVESYFEEIVGLMDGG 142          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7X8NA10_9FLAO (5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Lutibacter sp. B1 TaxID=2725996 RepID=A0A7X8NA10_9FLAO)

HSP 1 Score: 201 bits (511), Expect = 1.020e-61
Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +++HI VKGNNDMLSITQP IIKEIH KYL++G+DII TNTFSSTTIAMADYEMEK VYELNF+SA++A+E  +E TAK+P KPRFV G++GPTNRT S+SPDV DP FR VTFDEL +AYK Q + LIDGG
Sbjct:   39 KNFHISVKGNNDMLSITQPQIIKEIHKKYLEAGADIIETNTFSSTTIAMADYEMEKYVYELNFQSAKIAKEVAQEFTAKNPLKPRFVAGSIGPTNRTASMSPDVNDPGFRAVTFDELRIAYKQQIEALIDGG 170          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2R8Z7_9STRA (Methionine synthase (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R8Z7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.630e-61
Identity = 97/132 (73.48%), Postives = 115/132 (87.12%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            QD+ + VKGNND+L++TQPH+IK IH KYL++GS +IGTNTFSSTTIA ADY+ME   YELN+  A+LAREAC+E TAKDPTKPRFV+GALGPTNRTGSISPDVEDPS RNVTFDELV +Y ++  GL+DGG
Sbjct:  301 QDWDVNVKGNNDLLTLTQPHVIKGIHTKYLEAGSQLIGTNTFSSTTIAQADYKMESLAYELNYYGAKLAREACDEMTAKDPTKPRFVVGALGPTNRTGSISPDVEDPSVRNVTFDELVESYFEEVVGLMDGG 432          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2LA87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA87_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.060e-61
Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    4 DYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            D+   VKGNNDMLSITQPH+I  I+  YL+SGSD+IGTNTFSSTTIAMADYEME   YELN+E ARLAREAC+E TAKDPT PRFV GA+GPTNRTGSISP VEDPS RNVTFDELV  Y +Q  GL+DGG
Sbjct:  141 DWKCNVKGNNDMLSITQPHVIAGIYKGYLESGSDLIGTNTFSSTTIAMADYEMEDYAYELNYEGARLAREACDEMTAKDPTNPRFVCGAVGPTNRTGSISPSVEDPSARNVTFDELVDTYFEQVVGLMDGG 271          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A1H2TLM9_9FLAO (5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Lutibacter oricola TaxID=762486 RepID=A0A1H2TLM9_9FLAO)

HSP 1 Score: 199 bits (507), Expect = 3.380e-61
Identity = 96/132 (72.73%), Postives = 113/132 (85.61%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +D+ + VKGNNDMLSITQP  IK IHGKYL++G+DII TNTFSSTTIAMADYEME+ VYELN+ESA++A+E  EE TAK+PTKPRFV G++GPTNRT S+SPDV DP FR VTFD+L VAYK Q + LIDGG
Sbjct:   39 KDFKVSVKGNNDMLSITQPEAIKTIHGKYLEAGADIIETNTFSSTTIAMADYEMEEYVYELNYESAKIAKEVAEEFTAKNPTKPRFVAGSIGPTNRTASMSPDVNDPGFRAVTFDDLRVAYKQQAEALIDGG 170          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S0B190_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B190_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.410e-61
Identity = 98/133 (73.68%), Postives = 113/133 (84.96%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSG-SDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +D+   VKGNNDMLSITQPH+I+ I+ +YL+ G S++IGTNTFSSTTIAMADYEME   YELN+E ARLARE C+E TAKDPTKPRFV+GA+GPTNRTGSISP VEDPS RNVTFDELV  Y +Q  GL+DGG
Sbjct:  132 KDWSCNVKGNNDMLSITQPHVIQGIYRQYLEEGGSNLIGTNTFSSTTIAMADYEMEDYAYELNYEGARLAREVCDEVTAKDPTKPRFVVGAIGPTNRTGSISPSVEDPSARNVTFDELVETYFEQIVGLMDGG 264          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: UPI001CD4CDF0 (homocysteine S-methyltransferase family protein n=1 Tax=Lutimonas saemankumensis TaxID=483016 RepID=UPI001CD4CDF0)

HSP 1 Score: 197 bits (502), Expect = 2.200e-60
Identity = 96/132 (72.73%), Postives = 112/132 (84.85%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +D+ IL+KGNND+LS+TQP  IKEIH KYL++G+DII TNTFS TTIAMADY ME  VYELNFESARLA+EA +E TAKDP+KPRFV G++GPTNRT S+SPDV DP FR VTFDEL VAYK Q + L+DGG
Sbjct:   40 KDFEILLKGNNDLLSLTQPEAIKEIHRKYLEAGADIIETNTFSGTTIAMADYSMEDLVYELNFESARLAKEAAQEYTAKDPSKPRFVAGSMGPTNRTASMSPDVNDPGFRAVTFDELRVAYKQQGEALLDGG 171          
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2XWE9_9STRA (Methionine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.390e-59
Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    3 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSG-SDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
            +DYH LVKGNNDMLSITQP IIKEIH KYL+ G S +IGTNTFSSTTIAMADY+ME  V ELN ES RLAREAC+E TAKDPT+PRFV+GA+GPTNRTGSISP+VEDPS RNVTFDEL +AY +Q  GL++GG
Sbjct:   65 KDYHTLVKGNNDMLSITQPQIIKEIHLKYLEEGNSQLIGTNTFSSTTIAMADYDMESYVRELNVESVRLAREACDEVTAKDPTRPRFVVGAIGPTNRTGSISPNVEDPSVRNVTFDELEIAYYEQVCGLVEGG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUD9_9PHAE9.090e-8197.71Methionine synthase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D7FUT0_ECTSI2.080e-7997.01Methionine synthase n=1 Tax=Ectocarpus siliculosus... [more]
A0A7S3PSC6_9STRA5.570e-6271.97Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7X8NA10_9FLAO1.020e-6173.485-methyltetrahydrofolate--homocysteine methyltrans... [more]
A0A7S2R8Z7_9STRA2.630e-6173.48Methionine synthase (Fragment) n=1 Tax=labyrinthul... [more]
A0A7S2LA87_9STRA3.060e-6176.34Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1H2TLM9_9FLAO3.380e-6172.735-methyltetrahydrofolate--homocysteine methyltrans... [more]
A0A7S0B190_9STRA3.410e-6173.68Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
UPI001CD4CDF02.200e-6072.73homocysteine S-methyltransferase family protein n=... [more]
A0A7S2XWE9_9STRA1.390e-5977.44Methionine synthase n=1 Tax=Fibrocapsa japonica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036589Homocysteine-binding domain superfamilyGENE3D3.20.20.330coord: 1..134
e-value: 2.3E-41
score: 144.1
IPR036589Homocysteine-binding domain superfamilySUPERFAMILY82282Homocysteine S-methyltransferasecoord: 2..134
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 12..134
e-value: 2.1E-26
score: 93.4
IPR003726Homocysteine-binding domainPROSITEPS50970HCYcoord: 1..134
score: 21.372
NoneNo IPR availablePANTHERPTHR11103:SF11coord: 6..134
NoneNo IPR availablePANTHERPTHR11103FAMILY NOT NAMEDcoord: 6..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6459contigEcto-sp13_S_contig6459:1..1313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6459.17232.1mRNA_Ecto-sp13_S_contig6459.17232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6459 1..1313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6459.17232.1 ID=prot_Ecto-sp13_S_contig6459.17232.1|Name=mRNA_Ecto-sp13_S_contig6459.17232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
MLQDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIA
MADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTG
SISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036589HCY_dom_sf
IPR003726HCY_dom