mRNA_Ecto-sp13_S_contig6459.17232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A6H5JUD9_9PHAE (Methionine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUD9_9PHAE) HSP 1 Score: 260 bits (664), Expect = 9.090e-81 Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 10 DYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
DYHILVKGNNDMLSITQPHIIKEIH KYLDSGSDIIGTNTFS+TTIAMADYEMEKDVYELNFESARLAR+ACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG
Sbjct: 86 DYHILVKGNNDMLSITQPHIIKEIHTKYLDSGSDIIGTNTFSATTIAMADYEMEKDVYELNFESARLARKACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 216
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: D7FUT0_ECTSI (Methionine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT0_ECTSI) HSP 1 Score: 263 bits (673), Expect = 2.080e-79 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1
Query: 1 MLQDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
MLQDYHILVKGNNDMLSITQPHIIKEIH KY+DSGSDII TNTFS+TTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG
Sbjct: 1 MLQDYHILVKGNNDMLSITQPHIIKEIHTKYVDSGSDIIATNTFSATTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 134
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S3PSC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSC6_9STRA) HSP 1 Score: 197 bits (500), Expect = 5.570e-62 Identity = 95/132 (71.97%), Postives = 113/132 (85.61%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+D+ VKGNND+L++TQP +IK IH +YL+SGS +IGTNTFSSTTIA ADYEME YELN+ A+LAREAC+E TAKDPTKPRFV+GA+GPTNRTGSISPDVEDPS RNVTFDELV +Y ++ GL+DGG
Sbjct: 11 KDWTTNVKGNNDLLTLTQPEVIKGIHVQYLESGSRLIGTNTFSSTTIAQADYEMESLAYELNYYGAKLAREACDEMTAKDPTKPRFVVGAIGPTNRTGSISPDVEDPSVRNVTFDELVESYFEEIVGLMDGG 142
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7X8NA10_9FLAO (5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Lutibacter sp. B1 TaxID=2725996 RepID=A0A7X8NA10_9FLAO) HSP 1 Score: 201 bits (511), Expect = 1.020e-61 Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+++HI VKGNNDMLSITQP IIKEIH KYL++G+DII TNTFSSTTIAMADYEMEK VYELNF+SA++A+E +E TAK+P KPRFV G++GPTNRT S+SPDV DP FR VTFDEL +AYK Q + LIDGG
Sbjct: 39 KNFHISVKGNNDMLSITQPQIIKEIHKKYLEAGADIIETNTFSSTTIAMADYEMEKYVYELNFQSAKIAKEVAQEFTAKNPLKPRFVAGSIGPTNRTASMSPDVNDPGFRAVTFDELRIAYKQQIEALIDGG 170
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2R8Z7_9STRA (Methionine synthase (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R8Z7_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.630e-61 Identity = 97/132 (73.48%), Postives = 115/132 (87.12%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
QD+ + VKGNND+L++TQPH+IK IH KYL++GS +IGTNTFSSTTIA ADY+ME YELN+ A+LAREAC+E TAKDPTKPRFV+GALGPTNRTGSISPDVEDPS RNVTFDELV +Y ++ GL+DGG
Sbjct: 301 QDWDVNVKGNNDLLTLTQPHVIKGIHTKYLEAGSQLIGTNTFSSTTIAQADYKMESLAYELNYYGAKLAREACDEMTAKDPTKPRFVVGALGPTNRTGSISPDVEDPSVRNVTFDELVESYFEEVVGLMDGG 432
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2LA87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA87_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.060e-61 Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 1
Query: 10 DYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
D+ VKGNNDMLSITQPH+I I+ YL+SGSD+IGTNTFSSTTIAMADYEME YELN+E ARLAREAC+E TAKDPT PRFV GA+GPTNRTGSISP VEDPS RNVTFDELV Y +Q GL+DGG
Sbjct: 141 DWKCNVKGNNDMLSITQPHVIAGIYKGYLESGSDLIGTNTFSSTTIAMADYEMEDYAYELNYEGARLAREACDEMTAKDPTNPRFVCGAVGPTNRTGSISPSVEDPSARNVTFDELVDTYFEQVVGLMDGG 271
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A1H2TLM9_9FLAO (5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Lutibacter oricola TaxID=762486 RepID=A0A1H2TLM9_9FLAO) HSP 1 Score: 199 bits (507), Expect = 3.380e-61 Identity = 96/132 (72.73%), Postives = 113/132 (85.61%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+D+ + VKGNNDMLSITQP IK IHGKYL++G+DII TNTFSSTTIAMADYEME+ VYELN+ESA++A+E EE TAK+PTKPRFV G++GPTNRT S+SPDV DP FR VTFD+L VAYK Q + LIDGG
Sbjct: 39 KDFKVSVKGNNDMLSITQPEAIKTIHGKYLEAGADIIETNTFSSTTIAMADYEMEEYVYELNYESAKIAKEVAEEFTAKNPTKPRFVAGSIGPTNRTASMSPDVNDPGFRAVTFDDLRVAYKQQAEALIDGG 170
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S0B190_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B190_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.410e-61 Identity = 98/133 (73.68%), Postives = 113/133 (84.96%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSG-SDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+D+ VKGNNDMLSITQPH+I+ I+ +YL+ G S++IGTNTFSSTTIAMADYEME YELN+E ARLARE C+E TAKDPTKPRFV+GA+GPTNRTGSISP VEDPS RNVTFDELV Y +Q GL+DGG
Sbjct: 132 KDWSCNVKGNNDMLSITQPHVIQGIYRQYLEEGGSNLIGTNTFSSTTIAMADYEMEDYAYELNYEGARLAREVCDEVTAKDPTKPRFVVGAIGPTNRTGSISPSVEDPSARNVTFDELVETYFEQIVGLMDGG 264
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: UPI001CD4CDF0 (homocysteine S-methyltransferase family protein n=1 Tax=Lutimonas saemankumensis TaxID=483016 RepID=UPI001CD4CDF0) HSP 1 Score: 197 bits (502), Expect = 2.200e-60 Identity = 96/132 (72.73%), Postives = 112/132 (84.85%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+D+ IL+KGNND+LS+TQP IKEIH KYL++G+DII TNTFS TTIAMADY ME VYELNFESARLA+EA +E TAKDP+KPRFV G++GPTNRT S+SPDV DP FR VTFDEL VAYK Q + L+DGG
Sbjct: 40 KDFEILLKGNNDLLSLTQPEAIKEIHRKYLEAGADIIETNTFSGTTIAMADYSMEDLVYELNFESARLAKEAAQEYTAKDPSKPRFVAGSMGPTNRTASMSPDVNDPGFRAVTFDELRVAYKQQGEALLDGG 171
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Match: A0A7S2XWE9_9STRA (Methionine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE9_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.390e-59 Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 1
Query: 7 QDYHILVKGNNDMLSITQPHIIKEIHGKYLDSG-SDIIGTNTFSSTTIAMADYEMEKDVYELNFESARLAREACEEATAKDPTKPRFVMGALGPTNRTGSISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGG 402
+DYH LVKGNNDMLSITQP IIKEIH KYL+ G S +IGTNTFSSTTIAMADY+ME V ELN ES RLAREAC+E TAKDPT+PRFV+GA+GPTNRTGSISP+VEDPS RNVTFDEL +AY +Q GL++GG
Sbjct: 65 KDYHTLVKGNNDMLSITQPQIIKEIHLKYLEEGNSQLIGTNTFSSTTIAMADYDMESYVRELNVESVRLAREACDEVTAKDPTRPRFVVGAIGPTNRTGSISPNVEDPSVRNVTFDELEIAYYEQVCGLVEGG 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6459.17232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6459.17232.1 >prot_Ecto-sp13_S_contig6459.17232.1 ID=prot_Ecto-sp13_S_contig6459.17232.1|Name=mRNA_Ecto-sp13_S_contig6459.17232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp MLQDYHILVKGNNDMLSITQPHIIKEIHGKYLDSGSDIIGTNTFSSTTIAback to top mRNA from alignment at Ecto-sp13_S_contig6459:1..1313- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6459.17232.1 ID=mRNA_Ecto-sp13_S_contig6459.17232.1|Name=mRNA_Ecto-sp13_S_contig6459.17232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1313bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6459:1..1313- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6459:1..1313- >mRNA_Ecto-sp13_S_contig6459.17232.1 ID=mRNA_Ecto-sp13_S_contig6459.17232.1|Name=mRNA_Ecto-sp13_S_contig6459.17232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=402bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6459:1..1313- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |