mRNA_Ecto-sp13_S_contig6441.17210.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6441.17210.1
Unique NamemRNA_Ecto-sp13_S_contig6441.17210.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: D7FK80_ECTSI (Fructose-bisphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK80_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 3.810e-90
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKKA 387
            IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEI PKDIHERCPIIIGNPPFVERVLDEYKKA
Sbjct:  118 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEITPKDIHERCPIIIGNPPFVERVLDEYKKA 246          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A836CP10_9STRA (Fructose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP10_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.550e-59
Identity = 93/126 (73.81%), Postives = 101/126 (80.16%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEY 378
            IYSCN+GN+  WD  I+R V G      P+A RYVGSMVSDVHRTLLYGG+FLYPADKKS  GKLRVLYEGFPMALIIEQAGG ASTGMFNGSI RVLEI P  IH++CPII+G P  VE VL EY
Sbjct:  214 IYSCNQGNYGGWDAPIQRYVDGITAGDKPYALRYVGSMVSDVHRTLLYGGIFLYPADKKSRGGKLRVLYEGFPMALIIEQAGGMASTGMFNGSIQRVLEIKPTSIHDKCPIILGTPSMVESVLKEY 339          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A7S2XVM0_9STRA (Fructose-bisphosphatase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVM0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.270e-57
Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESP-PWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKKA 387
            IYSCNEGNF +W  EI++ V  FKT+ P P++ RYVGSMVSD+HR++LYGG+FLYPAD KS  GKLR++YEG+PMA++IE+AGGSASTGMF G IGR++EI P+ IH RCPII+GN   V+RVL  YK A
Sbjct:  208 IYSCNEGNFATWSPEIQQCVTDFKTQKPKPFSARYVGSMVSDLHRSILYGGVFLYPADSKSPNGKLRLMYEGYPMAMLIEEAGGSASTGMFKGGIGRIMEIVPEGIHARCPIIMGNTELVDRVLGYYKDA 337          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: W7TP29_9STRA (Fructose-bisphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP29_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.740e-57
Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKKA 387
            IYSCNEGN+  WD+ ++ AV  FK + PP+A RYVGSMVSDVHRTLLYGG+FLYPAD+KS  GKLRVLYEGFPMA I+E AGG A+TG+F G I RVL++ P ++H+RCPII+G P  V+RVLD Y + 
Sbjct:  212 IYSCNEGNYSLWDDAMRAAVDAFKHQDPPYAARYVGSMVSDVHRTLLYGGIFLYPADRKSKIGKLRVLYEGFPMAKIVEDAGGIATTGLFQGKIQRVLDLHPSNVHDRCPIILGTPSDVQRVLDVYAQV 340          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A6U4JRS6_9STRA (Fructose-bisphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JRS6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 8.490e-56
Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESP-PWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKKA 387
            IYS NEGNF  WD EI+ AV  FK   P P+ QRYVGSMVSDVHRT+LYGG+FLYPAD+KS  GKLRVLYEGFPM L++++AGG ASTGMF GSI  V EI P+ IHERCPII+GN  FV++VL  Y+ +
Sbjct:  218 IYSANEGNFAHWDPEIQEAVNSFKNAEPKPFTQRYVGSMVSDVHRTILYGGVFLYPADRKSPNGKLRVLYEGFPMCLLVKEAGGKASTGMFMGSIRDVTEIDPESIHERCPIILGNTEFVDQVLAHYESS 347          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: B8BXS2_THAPS (Fructose-bisphosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXS2_THAPS)

HSP 1 Score: 185 bits (469), Expect = 1.890e-55
Identity = 87/128 (67.97%), Postives = 101/128 (78.91%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKK 384
            IYSCNEGNF  WD+ IK AV  FK+   P++ RYVGSMV+D+HRTLLYGG+++YPADKKS KGKLR LYEG PMALIIEQAGG ASTG+F G IGRV+E+ P  IH +CPII+G P  V  V D YKK
Sbjct:  203 IYSCNEGNFVHWDQPIKDAVEAFKSSEKPYSARYVGSMVADIHRTLLYGGIYIYPADKKSPKGKLRCLYEGIPMALIIEQAGGIASTGLFEGKIGRVVELTPDAIHCKCPIIMGGPRDVGVVYDCYKK 330          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: F0YHW0_AURAN (Fructose-bisphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHW0_AURAN)

HSP 1 Score: 184 bits (468), Expect = 2.280e-55
Identity = 82/126 (65.08%), Postives = 101/126 (80.16%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEY 378
            IYSCNEGN+  WD+EI+ A   FK    P++ RYVGSMVSDVHRTLLYGG+F YPADKKS KGKLRVLYEG+PMAL+ EQAGG ASTG F G +GR++++ P++IH+RCPII+G P  V  +L +Y
Sbjct:  206 IYSCNEGNYSLWDKEIQEATDAFKAGPKPYSARYVGSMVSDVHRTLLYGGVFYYPADKKSAKGKLRVLYEGYPMALLTEQAGGVASTGRFRGKVGRIMDVVPENIHDRCPIIMGCPRDVAMILSKY 331          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A7S4GJ99_9EUGL (Fructose-bisphosphatase n=2 Tax=Eutreptiella TaxID=73024 RepID=A0A7S4GJ99_9EUGL)

HSP 1 Score: 186 bits (472), Expect = 3.120e-55
Identity = 85/127 (66.93%), Postives = 101/127 (79.53%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYK 381
            IYSCNEGN  +WDE IK+AV  FK    P+A RYVGSMVSDVHRT+LYGG+++YPAD KS  GKLRVLYEGFPMA+I+EQAGG AS GMF G+I R+L+I P DIH +CP+I+G    V  VLD+YK
Sbjct:  272 IYSCNEGNSSNWDEPIKKAVAAFKDPKKPYAARYVGSMVSDVHRTILYGGIYIYPADAKSKNGKLRVLYEGFPMAMIVEQAGGVASCGMFKGTIQRMLDIVPSDIHAKCPVILGAARDVNFVLDQYK 398          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A7S0BWS4_9STRA (Fructose-bisphosphatase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWS4_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.670e-55
Identity = 85/128 (66.41%), Postives = 101/128 (78.91%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKK 384
            IYSCNEGN   WD+ IK AV  FK    P++ RYVGSMV+D+HRTLLYGG+++YPADKK+TKGKLR LYEG PMALIIEQAGG ASTGMF G I RVLE+ P DIH +CPII+G P  +  V ++Y+K
Sbjct:  206 IYSCNEGNSKHWDQPIKDAVEAFKHSEKPYSARYVGSMVADIHRTLLYGGIYIYPADKKNTKGKLRCLYEGIPMALIIEQAGGIASTGMFEGKIQRVLELVPDDIHCKCPIIMGGPRDIAVVYEQYEK 333          
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Match: A0A7S4IKN0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IKN0_9EUKA)

HSP 1 Score: 178 bits (451), Expect = 6.460e-55
Identity = 86/129 (66.67%), Postives = 99/129 (76.74%), Query Frame = 1
Query:    1 IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGGLFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEIAPKDIHERCPIIIGNPPFVERVLDEYKKA 387
            IYSCNEGN   WDE IK+++  FK     +A RYVGSMVSDVHRT+LYGG F+YPADKKS  GKLRVLYEGFPMALI+E AGG ASTGMF G+I R+L++ P DIHERCP+I+G P  V  VL  YK  
Sbjct:   37 IYSCNEGNSPHWDESIKKSIDYFKDNK--YAARYVGSMVSDVHRTILYGGCFVYPADKKSPGGKLRVLYEGFPMALIVEAAGGVASTGMFKGAIHRMLDLVPTDIHERCPVILGCPRDVNIVLGYYKSV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6441.17210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK80_ECTSI3.810e-9099.22Fructose-bisphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A836CP10_9STRA3.550e-5973.81Fructose-bisphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVM0_9STRA2.270e-5766.15Fructose-bisphosphatase n=2 Tax=Fibrocapsa japonic... [more]
W7TP29_9STRA6.740e-5765.89Fructose-bisphosphatase n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U4JRS6_9STRA8.490e-5667.69Fructose-bisphosphatase n=1 Tax=Phaeomonas parva T... [more]
B8BXS2_THAPS1.890e-5567.97Fructose-bisphosphatase n=1 Tax=Thalassiosira pseu... [more]
F0YHW0_AURAN2.280e-5565.08Fructose-bisphosphatase n=1 Tax=Aureococcus anopha... [more]
A0A7S4GJ99_9EUGL3.120e-5566.93Fructose-bisphosphatase n=2 Tax=Eutreptiella TaxID... [more]
A0A7S0BWS4_9STRA4.670e-5566.41Fructose-bisphosphatase n=2 Tax=Proboscia inermis ... [more]
A0A7S4IKN0_9EUKA6.460e-5566.67Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6441contigEcto-sp13_S_contig6441:6831..7935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score269.6
Seed ortholog evalue7.5e-70
Seed eggNOG ortholog2880.D7FK80
Model size390
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
Ec32 ortholog descriptioncytosolic fructose-1,6-bisphosphatase
Ec32 orthologEc-17_003090.1
EC3.1.3.11
Cds size390
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463890.1426802-CDS-Ecto-sp13_S_contig6441:6830..70331681463890.1426802-CDS-Ecto-sp13_S_contig6441:6830..7033Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6441 6831..7033 -
1681463890.1694038-CDS-Ecto-sp13_S_contig6441:7748..79351681463890.1694038-CDS-Ecto-sp13_S_contig6441:7748..7935Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6441 7749..7935 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6441.17210.1prot_Ecto-sp13_S_contig6441.17210.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6441 6831..7935 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6441.17210.1

>prot_Ecto-sp13_S_contig6441.17210.1 ID=prot_Ecto-sp13_S_contig6441.17210.1|Name=mRNA_Ecto-sp13_S_contig6441.17210.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
IYSCNEGNFDSWDEEIKRAVMGFKTESPPWAQRYVGSMVSDVHRTLLYGG
LFLYPADKKSTKGKLRVLYEGFPMALIIEQAGGSASTGMFNGSIGRVLEI
APKDIHERCPIIIGNPPFVERVLDEYKKA*
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mRNA from alignment at Ecto-sp13_S_contig6441:6831..7935-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6441.17210.1 ID=mRNA_Ecto-sp13_S_contig6441.17210.1|Name=mRNA_Ecto-sp13_S_contig6441.17210.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1105bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6441:6831..7935- (Ectocarpus species13 EcNAP12_S_4_19m)
ATCTACTCGTGCAACGAGGGGAACTTCGACAGCTGGGACGAGGAGATCAA GAGGGCGGTCATGGGCTTCAAGACGGAGTCGCCCCCGTGGGCGCAGCGCT ACGTGGGGTCCATGGTCTCGGACGTGCACCGGACGTTGTTGTACGGCGGG CTATTCCTCTACCCCGCTGACAAGAAGTCCACCAAGGGTGGGTTAGGGGC GACGAGAAGGAAGCGGGGTGTTGTTCCAGTATAGTAGTAGCGAATGTCTG CGTATTTTGTTCACGGACGTGTGTTTGGGTGCGGTAGCTCGTCAGAGGCC GAAAGAGAAAGAAGGTTGACTCAAGACCTTGTTGCTTAGAGAGTGAGGGA CATGCGGTAGGCAACACCATCGCCATGCAGCATTCCTATCAACACATTTC ATCAGCGTACCCCCCGGGAGGCCCCGTAGACATTATACTTTGCCGAGCGC CCCAAACAACGTGTGATATGCATAGCAGCTTGTTCGGTAGCAGTTGAAAA ATGCGCGTGCGTGGTTGTATCCTTTACACACCAATAGTCCTTTTTTCGCT TGATTCCCACTGCACAAACAGAAAAACACACGATAACGGAACCACTAGTA GAAAATTTGCATTTCTCGTCATATGCCACGGTTTCTGCCTTTAACCCGAA GAATAACCTAGCCTCTCCCATGACATGCCCCCTCACGGGGTTCTAGATCA TCGCCTTACGGGGTGCCTTCTGTTTCCAGCCGCACGGGCTGACGGGGAAA TTCATTGGTTAGCCGGTTAGCGCGGTTGATCCTAGTAAACACACACACAC ATACATGCGTTCGCGTTTTGTCTTGCCTCTTTAGCACTGACGTCTTTTCA ATGGTCAGCCGGTTAGCGCTAATAAAACAATCACACACACATCCCACAAT AGGCAAGCTGCGAGTGCTCTACGAGGGCTTCCCGATGGCCCTCATCATCG AGCAGGCCGGAGGATCCGCGTCAACGGGCATGTTCAACGGATCTATCGGC CGGGTGCTGGAGATCGCCCCCAAGGACATCCACGAGAGGTGCCCCATCAT CATCGGAAACCCGCCGTTCGTCGAGCGGGTGTTGGACGAGTACAAAAAGG CGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6441:6831..7935-

>mRNA_Ecto-sp13_S_contig6441.17210.1 ID=mRNA_Ecto-sp13_S_contig6441.17210.1|Name=mRNA_Ecto-sp13_S_contig6441.17210.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=390bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6441:6831..7935- (Ectocarpus species13 EcNAP12_S_4_19m)
ATCTACTCGTGCAACGAGGGGAACTTCGACAGCTGGGACGAGGAGATCAA
GAGGGCGGTCATGGGCTTCAAGACGGAGTCGCCCCCGTGGGCGCAGCGCT
ACGTGGGGTCCATGGTCTCGGACGTGCACCGGACGTTGTTGTACGGCGGG
CTATTCCTCTACCCCGCTGACAAGAAGTCCACCAAGGGCAAGCTGCGAGT
GCTCTACGAGGGCTTCCCGATGGCCCTCATCATCGAGCAGGCCGGAGGAT
CCGCGTCAACGGGCATGTTCAACGGATCTATCGGCCGGGTGCTGGAGATC
GCCCCCAAGGACATCCACGAGAGGTGCCCCATCATCATCGGAAACCCGCC
GTTCGTCGAGCGGGTGTTGGACGAGTACAAAAAGGCGTGA
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