mRNA_Ecto-sp13_S_contig644.17206.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A6H5JEH1_9PHAE (HTH_OrfB_IS605 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH1_9PHAE) HSP 1 Score: 319 bits (817), Expect = 5.760e-100 Identity = 187/324 (57.72%), Postives = 194/324 (59.88%), Query Frame = 1
Query: 541 GEGEANSVSDARSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAG-------------------------------TTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQTIKIPGRCVKDGYMFGKSCVTERLKGFEDWASYRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMV 1419
GEG+ANSVSDARSR+IKLDPT WKERLRKWMG ARWTYNRCL FLN KCRMNKT+ R V G + RDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFR ALDPGVRTF+TAVDSKGNVTEFA DV RIYRLCHHM KLQSKAFNKATPSRKRYNLRKAW RAIKRVKD VMDVRNKTVK LCKN DLIFLP+ NTKE+V
Sbjct: 196 GEGKANSVSDARSRKIKLDPTPEWKERLRKWMGTARWTYNRCLDFLNRKKCRMNKTNF--RRKVVGGWNHGDAKKRTGKKKKKRGKNRGNWSKPKKTSKRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFR-----------------------------------------------------------------------------ALDPGVRTFNTAVDSKGNVTEFASGDVTRIYRLCHHMDKLQSKAFNKATPSRKRYNLRKAWQRAIKRVKDLVMDVRNKTVKHLCKNCDLIFLPQLNTKELV 440
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A397GJP5_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GJP5_9GLOM) HSP 1 Score: 216 bits (551), Expect = 6.890e-58 Identity = 168/533 (31.52%), Postives = 251/533 (47.09%), Query Frame = 1
Query: 31 YDISRSTLTSWGDSSRVQIRRLGDDGNSGKRIYDVADVETQLGCDARPEKSQKEFIIYAGVSPSKHSEALERQVASLQESYPHHITL*DIGSGLSYKRKNFEALLERVHSGNVEEIVVSYRDRLCRYGFELVESLCKLHGTKIKLRGHNKNFLKISRPSAISSSRGTTAGGEGEANSVSDARSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCR-------------MNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQ-TIKIPGR-CVKDGYMFGKSCVTERLKGFEDWASYRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSK--AFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTCSC 1575
YD+S TL W DS R+ I R GKR+Y + D++ + + + +QK I YA VS + LERQ+A+L++ YP + + DI GL++KRK F ALLER+H+ +EE+VV+ +DRLCR+G ELVE + + +GT++ + G + + N + A +R + + TY + K + K L + A + + WVLETP++IRD AM DL +N + K F M F SKK+ Q +I I + K ++ C + + Y +++ +R G FY C+ + EI + + V ALDP V E+ D+ RIY+L H K+QS + + RKRY LR+ R K++ + D +K K LC++Y +I L +F T+ MV R K RI TAR M+TWSH+ F++ LL V+I TEEYTSKTC C
Sbjct: 222 YDVSVETLRRWADSGRIAIVRTP----GGKRLYSITDIQEIFRDNQQTQITQKAKICYARVSSEHQRDDLERQIANLRQYYPEYKIISDIRLGLNWKRKGFVALLERIHTEGIEEVVVTRKDRLCRFGSELVEWIFEKNGTRLVVLGTDVSAESSEAGELAEDLLSIVTVFVARHNGMRSAANRXXXXXXXXXXXXQELQNSSRQDTTYLSLSYARGEVKTQTLDGNTVEKKGIEQTKKALRAQCLNAANFNNTELQWVLETPYDIRDEAMNDLLKSYSSNFAAKRKK----FKMKFCSKKNQQQSITILSKHWGKSKGVYTFLCKMKSAENLPAELHYDSRLVM--NRLGEFYLCIPQPLEIWAENQDPTQSDAVIALDPAV--------------EWGKNDISRIYQLSHIYDKIQSTHDSIHGKVHKRKRYKLRRVMLRIHKKICCLINDCYHKLAKWLCQSYRIILLSKFQTQGMVRREKWRIRSKTARMMLTWSHFRFRQYLLHKVREYPWCRVIICTEEYTSKTCGC 730
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A1D1Y5P0_9ARAE (Putative transposase R104 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y5P0_9ARAE) HSP 1 Score: 207 bits (527), Expect = 6.540e-56 Identity = 137/339 (40.41%), Postives = 178/339 (52.51%), Query Frame = 1
Query: 583 RIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQ-TIKIPGRCVKDGYMFGKSCVTERLKGFE---DWASYRGEIIIQEDRAGNFYACVTEQSEIVPPK---VECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKA--FNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTC 1569
RI++ P + +LR+WMG ARWTYNRCL + K DL A D WVLETP++IRD A+ DL G +N K F+M FRSKKD Q +I I + G G+ ++K E + Y +++ +R G +Y C+ EI + E V +LDPGVRTF T D G E+ D+GR+YRLCH KLQSK + RKRY LR+ R K++ V D K K LC+NY +I LPEF T+ MV R +RRIG TAR M +WSHY F++ L+ + VVI TEEYTSKTC
Sbjct: 199 RIRIYPNQQERLKLRRWMGTARWTYNRCLIAVEKEGINRKKKDLRALCLNAKNFNDTNLKWVLETPYDIRDEALNDLLKGYSSNFASNRKK----FNMKFRSKKDPQQSIAILSK--HWGKSRGEYSFLHKIKSSEPLPEKLEYDSRLVL--NRLGEYYLCIPRPLEIRAENQGPIFRKEGSGVISLDPGVRTFMTGYDPSGTAVEWGKNDIGRVYRLCHAYDKLQSKRDQIHGKKNKRKRYRLRRVMLRIYKKIHCLVNDCHYKLAKWLCENYRIILLPEFRTQGMVRRGQRRIGSKTARAMCSWSHYRFRQHLVHKSREYPWCQVVICTEEYTSKTC 529
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A1Y1ITS5_KLENI (Putative Transposase IS605 OrfB C-terminal n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ITS5_KLENI) HSP 1 Score: 206 bits (524), Expect = 1.100e-55 Identity = 169/562 (30.07%), Postives = 259/562 (46.09%), Query Frame = 1
Query: 46 STLTSWGDSSRVQIRRLGDDGNSGKRIYDVADVETQLGCDARPEKSQ-----KEFIIYAGVSPSKHSEALERQVASLQESYPHHITL*DIGSGLSYKRKNFEALLERVHSGNVEEIVVSYRDRLCRYGFELVESLCKLHGTKIKLRGHNKNFLKISRPSAISSSRGTTAGGEGEANSVSDARSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNT-TKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQTIKIPGRCVK---------DGYMFGKSCVTERLKGFEDWASY---RGEIIIQE----DRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVT-EFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYN-LRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRA---KRRIGKGTARGMMTWSHYSFKELLKTTALREGTMVVIVTEEYTSKTCSCEHFTTPSVGPRSSDVLRAEGSWTET 1650
+TL W DS + + GK Y + +V + D R E+ Q K+ + Y VS L+RQ +Q YP H + DIGSG+++KRK + +LE G +EE+VV+YRDRLCR+ +ELV + HG ++ + +++ R I L++W G AR TYN L L T + + L R + A S++L+TP +RD A+ DL G+ + K+ KN +H F M +RSKK+VQ++ + +K D + VT + AS RG++ D+ G+F+ T + + +P + + + ALDPGVRTF TA NV + AP + R+ RL HH+ +L+S+ + R +RKA R KRV + +V K + L + I LP F T+EM +R +RRIGK T+R M W HY+F+ L G + ++ E YT+KTC+ + ++G S V +G ET
Sbjct: 22 ATLRQWADSGLITSFKTP----GGKYRYLIDNVISGGSADTRAEELQRPATEKQKVCYCRVSSLGQKADLDRQAQYMQSRYPEHTIIRDIGSGINFKRKGLQTILELAFRGRLEEVVVAYRDRLCRFAYELVAWIFHQHGVRLVV--------------------------------LNEEEGRTI-----------LKRWFGCARKTYNMALEALKKRTAHKRTEAWLKNRFTRASNVSKAN-SFLLDTPTHVRDGAIADLMKGLRNEVAKKRKNGSHAFEMRYRSKKEVQSLYLEKTAIKKLIHADSHSDFLSMYPTHVTNAIFLISKKASLLNCRGKVSFDARLVMDKLGHFHIHATVEKDEIPSENQ---GRGIVALDPGVRTFMTAYSPSDNVAFQIAPGCIQRMVRLEHHIDRLRSEISLLPPQCKGRARRMRKAALRLHKRVSNLTSEVHWKVAQFLTDRFQTIVLPPFATQEMCSRTGDRQRRIGKSTSRKMHLWGHYTFRTRLAMKCKERGCDLKVLDEVYTTKTCTGCGWVHDTIG--GSKVFLCQGCGLET 530
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A397GM53_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GM53_9GLOM) HSP 1 Score: 199 bits (506), Expect = 7.080e-53 Identity = 129/347 (37.18%), Postives = 183/347 (52.74%), Query Frame = 1
Query: 550 EANSVSDARSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQ-TIKIPGR-CVKDGYMFGKSCVTERLKGFEDWASYRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQS--KAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTCSC 1575
+++ + +++RI+L PT K +L++WMG ARWTYNRCL + K L + A + + WVLETP++IRD AM DL +N + K F M FRSKKD Q +I I + K ++ C + + Y +++ +R G FY C+ + EI + V ALDPGVRTF T D G E+ D+ RIYRL H K+QS + + +KRY L + R K+++ + D +K K LC++Y +I LP+F T+ MV R KRRI TAR M+TWSH+ F++ LL V+I TEEYTSKTC C
Sbjct: 193 KSSKIPAGKTQRIRLFPTQEEKSKLKRWMGTARWTYNRCLVAVKKEGIERTKKALRAQCLNAANFNNTELQWVLETPYDIRDEAMNDLLKSYSSNFAAKRKK----FKMKFRSKKDQQQSIAILSKHWGKSKGVYTFLCKMKSAENLPAELHYYSRLMM--NRLGEFYLCIPQPLEIWAKNQGPTQSDAVIALDPGVRTFITGYDPSGQAVEWGKNDISRIYRLSHIYDKIQSTHNSIHGKVHKQKRYKLCRVMLRIHKKIRCLINDCHHKLAKWLCQSYRIILLPKFQTQGMVRRGKRRIRSKTARMMLTWSHFRFRQYLLHKVREYPWCRVIICTEEYTSKTCGC 533
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A6H5JUL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL6_9PHAE) HSP 1 Score: 187 bits (476), Expect = 2.500e-52 Identity = 93/125 (74.40%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1075 VPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKG 1449
+PP+VE EDLKV ALDPGVRTF+T VD+KGN TEFAP D GRIY LCHHM LQSKAF+K+ S+KRY LRKAWHRAIKRV V DVRNKTVK LCKNYD++FLP+FNTK++VNRAKR IG G
Sbjct: 56 IPPQVEYHEDLKVIALDPGVRTFNTGVDTKGNATEFAPGDAGRIYPLCHHMDLLQSKAFDKSVGSKKRYRLRKAWHRAIKRVTHLVTDVRNKTVKHLCKNYDVVFLPKFNTKDVVNRAKRNIGNG 180
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: UPI001CFDDE3D (uncharacterized protein n=5 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDDE3D) HSP 1 Score: 181 bits (458), Expect = 7.950e-47 Identity = 118/337 (35.01%), Postives = 172/337 (51.04%), Query Frame = 1
Query: 574 RSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTR-DCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQTIKIPGRCVKDGYMFGKSCVTERLKGFEDWAS-YRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTCSC 1575
+S +I+L P + L +WMG ARW YN+CL F N +K + K + R+ V + WV+ TP+++RD+A ++L TN +K++ F + FR KKD + + C G +K E + + II +++ ++Y C+ + +I +V ALDPGVRTF T D G T++ RI RLC KLQSK KRY ++A R +++++ V D+ K LC+NY +I LP F T++MV + RRI TAR M+TWSHY FK+ LL T + IV E YTSKTCSC
Sbjct: 117 KSLKIRLYPNEQERTTLNQWMGTARWIYNKCLEFTNKSK-GVKKNKKNFRTFVVNNDNYQTENQWVVNTPYDVRDAAAIELLTAFNTNFEKKKAGTIDKFMIRFRRKKDRKDHFVL-HCKHWKKKSGLYSFIRNIKSSEPLPEELQYDSIIIKNKLNHYYLCIPQVLDIRGENQAPQHSGQVVALDPGVRTFQTTFDLNGYSTKWGSGGAERIGRLCCAYDKLQSKWSQPEVRHCKRYKYKRAGRRIQQKIRNIVDDLHKKLCLWLCRNYQVILLPSFETQKMVKKLHRRINSKTARKMLTWSHYRFKQRLLHKAREHPWTHIYIVNEAYTSKTCSC 451
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A397J2C8_9GLOM (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J2C8_9GLOM) HSP 1 Score: 172 bits (435), Expect = 4.700e-43 Identity = 124/363 (34.16%), Postives = 177/363 (48.76%), Query Frame = 1
Query: 550 EANSVSDARSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQ-TIKIPGR-CVKDGYMFGKSCVTERLKGFEDWASYRGEIIIQEDRAGNFYACVTEQSEIV-PPKVEC---------------PEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSK--AFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTCSC 1575
+++ + +++RI P K +L++WMG ARWTYNRCL + K L + + + WVLETP+ IRD AM DL +N + K F M F SKKD Q +I I + K ++ C + K Y +++ +R G FY C+ + EI+ PK++ + V LDPGVRTF T D G E+ D+ RIYRL H K+QS + + Y L + R K++ + + R+K K LC++Y +I LP+F T+ MV KRRI TAR M+TWSH+ F++ LL V+I TEEYTSKTC C
Sbjct: 22 KSSKIPAGKTQRIHFFPMQEEKLKLKRWMGTARWTYNRCLVAVEKEGIERTKKALRAQCLNIANFNNTELQWVLETPYNIRDEAMNDLLKSYSSNFVAKRKK----FKMKFHSKKDQQQSIAILSKHWGKSKGVYTFLCKMKLAKNLPAELHYDSRLVM--NRLGEFYLCIPQPLEIILVPKIDFGFLSILEIWAENQGPTQSDAVIVLDPGVRTFITGYDPSGQAVEWGKNDISRIYRLSHIYDKIQSTHDSIHGKXXXXICYKLCRVMLRIHKKICCLINNCRHKLAKWLCQSYRIILLPKFQTQGMVRCGKRRIRSKTARMMLTWSHFRFRQYLLHKVREYPWCWVIICTEEYTSKTCGC 378
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: UPI001D053024 (uncharacterized protein n=2 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D053024) HSP 1 Score: 166 bits (419), Expect = 1.420e-42 Identity = 110/317 (34.70%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 634 MGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTR-DCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQTIKIPGRCVKDGYMFGKSCVTERLKGFEDWAS-YRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRNKTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKE-LLKTTALREGTMVVIVTEEYTSKTCSC 1575
MG ARW YN+CL F + K + K + R+ V + WV+ TP+++RD+A ++L TN +K++ F + FR KKD + + C G +K E + + II +++ ++Y C+ + +I +V LDPGVRTF T D G T++ RI RLC KLQSK KRY ++A R +++++ V D+ K LC+NY +I LP F T++MV + RRI TAR M+TWSHY FK+ LL T + IV E YTSKTCSC
Sbjct: 1 MGTARWIYNKCLEFTHNFK-GVKKNKKNFRTFVVNNDNYQTENQWVVNTPYDVRDAAAIELLTAFNTNFEKKKAGMIDKFMIRFRRKKDRKDHFVL-HCKHWKKKSGLYSFIRNIKSAEPLPEELQYDSIIIKNKLNHYYLCIPQVLDIRGENQAPQHSGQVVGLDPGVRTFQTTFDLNGYSTKWGSGGAERIGRLCCAYDKLQSKWSQPEVRHCKRYKYKRAGRRIQQKIRNIVDDLHKKLCLWLCRNYQVILLPSFETQKMVKKLHRRINSKTARKMLTWSHYRFKQRLLHKAREHPWTHIYIVNEAYTSKTCSC 315
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Match: A0A1Y1IP76_KLENI (Putative Transposase IS605 OrfB C-terminal n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IP76_KLENI) HSP 1 Score: 168 bits (425), Expect = 2.410e-41 Identity = 163/545 (29.91%), Postives = 246/545 (45.14%), Query Frame = 1
Query: 22 RERYDISRSTLTSWGDSSRVQIRRLGDDGNSGKRIYDVADVETQLGCDARPEKSQKEFIIYAGVSPSKHSEALERQVASLQESYPHHITL*DIGSGLSYKRKNFEALLER--VHSGNVEEIVVSYR----DRLCRYGFELVESLCKLHGTKIKLRGHNKNFLKISRPSAISSSRGTTAGGEGEANSVSDA---RSRRIKLDPTTAWKERLRKWMGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFEIRDSAMVDLYDGIVTNLKKREKNPTHTFSMTFRSKKDVQ----TIKIPGRCVK-DGY----MFGKSC--VTERLKGFEDWASYRGEIIIQEDRAGNFYACVTEQSEIVPPKVECPEDLKVAALDPGVRTFDTAVDSKGNVTEFAPVDVGRIYRLCHHMVKLQSKAFNKATPSRKRYNLRKAWHRAIKRVKDQVMDVRN----KTVKLLCKNYDLIFLPEFNTKEMVNRAKRRIGKGTARGMMTWSHYSFKELLKTTALREGTMVVIVTEEYTSKTCS-CEH 1581
R + +S TL W S +V ++R G+R++ + D Q A P ++E ++Y VS K + + RQ A L + +P + DIGSGL++KR +LLER V S +S+R R C FE + G + +DA R+R+I+L P A K+ L +W AR++YN+ + +N T NK L + A RD W+LETP +IR A+ + + + +N FSM ++ +K TI +P ++ G+ +FG C V E L A + IQ D ++ V + +VPP+ E V ALDPGVRTF TA KGN E ++ LC H+ +L S+ + P+R R + A +K+++ ++ D+RN KT + L + ++I P F+T+ M R RRI T R + SHY FK+ LK A G V+ V+E YTSKTC C H
Sbjct: 10 RHHFGVSGKTLYRWEASGKVTVKRSP----GGRRLFLIDDPLAQ----AEP---RRESVVYVRVSSGKQQDDMRRQEAYLLDQHPGSKVVRDIGSGLNFKRAGLLSLLERNTVSSSWFATRQISHRRRSWQRTCSPPFEF-----------------------------------SVVDGTASEDMPTDAPVIRTRKIRLLPNKAQKKLLDRWRHAARYSYNKAVFLMNET-ASYNKLYLRNLITPAEVNRD--KPWLLETPKDIRAGAVFEAAKNVKAAITILTRNNIEHFSMGYKGRKKEDGHGWTIDVPKSALRVRGFRRLQVFGDYCPWVFETLSRIGPLAM---DCKIQYDGV-KYFLIVPYERHVVPPRRE-----GVVALDPGVRTFQTAYTPKGNCYELGKGCCRKLEALCVHLDRLISR--ESSVPNRLR-RTKWALRTQMKKLRRRLRDLRNELHYKTAEYLTRTANIILPPTFDTRNMTRRTTRRIRSRTVRNLSLLSHYKFKQRLKAKAAVRGVRVMEVSEHYTSKTCGRCGH 493 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig644.17206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig644.17206.1 >prot_Ecto-sp13_S_contig644.17206.1 ID=prot_Ecto-sp13_S_contig644.17206.1|Name=mRNA_Ecto-sp13_S_contig644.17206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=356bp MGMARWTYNRCLHFLNTTKCRMNKTDLDGRSSVAGTTRDCKTSWVLETPFback to top mRNA from alignment at Ecto-sp13_S_contig644:16927..18732+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig644.17206.1 ID=mRNA_Ecto-sp13_S_contig644.17206.1|Name=mRNA_Ecto-sp13_S_contig644.17206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig644:16927..18732+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig644:16927..18732+ >mRNA_Ecto-sp13_S_contig644.17206.1 ID=mRNA_Ecto-sp13_S_contig644.17206.1|Name=mRNA_Ecto-sp13_S_contig644.17206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1068bp|location=Sequence derived from alignment at Ecto-sp13_S_contig644:16927..18732+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |