prot_Ecto-sp13_S_contig644.17205.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig644.17205.1
Unique Nameprot_Ecto-sp13_S_contig644.17205.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length261
Homology
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BLAST of mRNA_Ecto-sp13_S_contig644.17205.1 vs. uniprot
Match: Q6XLX6_9PHYC (FirrV-1-C2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX6_9PHYC)

HSP 1 Score: 234 bits (598), Expect = 2.550e-72
Identity = 128/254 (50.39%), Postives = 164/254 (64.57%), Query Frame = 0 
Query:   10 NEDVNNKHFLPPLASLFNTKTGVCAWCPVEHTYQ-NTTYKVNVLCMPLLLWYNGKGCPDAKLAEMTTRAYFMQIDPHPEIPYQAFCAILEQT-FKPRQVSKQEARNRTNFLMVRLHTWKQRELHNEKDYPARPRTLSLERRQHQSYGHFGNNIAYTQCAPDDTSTGFYQPFERSFSMGEKALTPSMGRTWTKEMLDKPAIRAFFGIPEELRGKCNIVGGKLEHETIKTHAQGYAASRSSLEAAMNIGLKRAEFR 261
            NED   K  +P LASLFNT+TGVCAW PV HT     T+KV V+ + +L WY+ KG PD K+ EM    +FM I    +IPY+    +L +T FKP Q+S +E+ N   F +V    W++ E  N++ YP+RPR L L   +   +   GN +AY+Q AP D S+G+   FE+SFS  EK L P+MGR WT EMLD P I  FF IP +LRGKC+IVGGKLE  TI+THA  YAA + ++EAAMN  LKRAE R
Sbjct:  115 NEDPLAKSLMPSLASLFNTRTGVCAWKPVIHTDGVGKTWKVVVIDLNILKWYHTKGRPDEKVNEMKVTKFFMSILKEVDIPYEILSELLARTPFKPHQISTKESYNTHRFWVVSFSEWQKIEEENDRRYPSRPRRLRLANPK-TPFSSKGNTVAYSQNAPGDFSSGYVPGFEKSFSPEEKKLIPTMGRAWTLEMLDSPEIVEFFNIPADLRGKCHIVGGKLEPATIQTHAAAYAADKLNIEAAMNRRLKRAEDR 367
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig644.17205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q6XLX6_9PHYC2.550e-7250.39FirrV-1-C2 n=1 Tax=Feldmannia irregularis virus a ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig644contigEcto-sp13_S_contig644:15311..16093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig644.17205.1mRNA_Ecto-sp13_S_contig644.17205.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig644 15311..16117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig644.17205.1 ID=prot_Ecto-sp13_S_contig644.17205.1|Name=mRNA_Ecto-sp13_S_contig644.17205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp
MQRQQGQKYNEDVNNKHFLPPLASLFNTKTGVCAWCPVEHTYQNTTYKVN
VLCMPLLLWYNGKGCPDAKLAEMTTRAYFMQIDPHPEIPYQAFCAILEQT
FKPRQVSKQEARNRTNFLMVRLHTWKQRELHNEKDYPARPRTLSLERRQH
QSYGHFGNNIAYTQCAPDDTSTGFYQPFERSFSMGEKALTPSMGRTWTKE
MLDKPAIRAFFGIPEELRGKCNIVGGKLEHETIKTHAQGYAASRSSLEAA
MNIGLKRAEFR
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