prot_Ecto-sp13_S_contig12001.1719.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12001.1719.1
Unique Nameprot_Ecto-sp13_S_contig12001.1719.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: D7G5W8_ECTSI (Putative homoaconitate hydratase, c-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W8_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 3.140e-77
Identity = 113/123 (91.87%), Postives = 120/123 (97.56%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLL 142
            +VRVPTFLVPATQKVYNDIQTLKI GRTLASIFREAGCLEPASPSCAACLGGPADTYARMN+PFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASA+TG VTDPREVF FD++KRWA+ED+L
Sbjct:  147 KVRVPTFLVPATQKVYNDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNQPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAITGYVTDPREVFAFDQDKRWAIEDIL 269          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: A0A6H5KHV3_9PHAE (3-isopropylmalate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV3_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 3.260e-74
Identity = 113/123 (91.87%), Postives = 119/123 (96.75%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLL 142
            +VRVPTFLVPATQKVYNDIQTLKI GRTL SIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASA+TG VTDPREVF FD++KRWA+ED+L
Sbjct:  404 KVRVPTFLVPATQKVYNDIQTLKIGGRTLGSIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAITGYVTDPREVFGFDQDKRWAIEDIL 526          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: X2KY86_SCYLO (3-isopropylmalate dehydratase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY86_SCYLO)

HSP 1 Score: 238 bits (607), Expect = 2.040e-73
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLL 142
            +VRVPTFLVPATQKVYNDIQT+ I GRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK AGIYLASPYTAAASA+TG VTDPREVF+FDK KRWAVED+L
Sbjct:  423 KVRVPTFLVPATQKVYNDIQTMTIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKGAGIYLASPYTAAASAITGFVTDPREVFEFDKGKRWAVEDIL 545          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: A0A835YVF1_9STRA (3-isopropylmalate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF1_9STRA)

HSP 1 Score: 219 bits (557), Expect = 9.440e-67
Identity = 105/123 (85.37%), Postives = 112/123 (91.06%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLL 142
            +VRVPTFLVPATQKVYNDIQ LKI GRT+A IFREAGC+EPASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHKDAGI+LASPYTAAASAVTG VTDPREV+ FDK +R  VE LL
Sbjct:  352 KVRVPTFLVPATQKVYNDIQNLKINGRTMAQIFREAGCIEPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVYGFDKARRHPVETLL 474          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: W7TZ20_9STRA (3-isopropylmalate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ20_9STRA)

HSP 1 Score: 196 bits (499), Expect = 9.880e-58
Identity = 94/126 (74.60%), Postives = 111/126 (88.10%), Query Frame = 0
Query:   19 HQVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLLMK 144
            ++V VPTFLVPAT++VY+D+ +L + GRTLA IFR+AGC++PASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHKDAGI+LASPYTAAASAVTG VTDPREVF+F + ++ A E L  K
Sbjct:  385 NKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQPA-ETLATK 509          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: A0A5J4YMP4_PORPP (3-isopropylmalate dehydratase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMP4_PORPP)

HSP 1 Score: 189 bits (481), Expect = 4.390e-55
Identity = 88/123 (71.54%), Postives = 104/123 (84.55%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLL 142
            +V+VPT+LVPATQ+V+ D+  +KI+G+TLA IF EAGC+EPA+PSCAACLGGP DT+ARMN    CVSTTNRNFPGRMG KD+ +YLASPYTAAASAVTG VTDPREVF+FDK KR   E  +
Sbjct:  393 KVKVPTYLVPATQRVWQDVYNIKIKGQTLAEIFSEAGCVEPAAPSCAACLGGPKDTFARMNTAEVCVSTTNRNFPGRMGSKDSSVYLASPYTAAASAVTGYVTDPREVFEFDKQKRVTAEQAI 515          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: R7QD35_CHOCR (3-isopropylmalate dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD35_CHOCR)

HSP 1 Score: 184 bits (467), Expect = 3.660e-53
Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDL 141
            +V VPTFLVPATQKVY D++TL+I G TL  IF  AGC+    P CAACLGGP+DT+AR+NEP  CVSTTNRNFPGRMG K+  IYLASPYT AASAVTG VTDPREV+DFD NKR   E L
Sbjct:  377 KVAVPTFLVPATQKVYEDVETLRINGETLKDIFYNAGCIALGDPGCAACLGGPSDTFARLNEPLVCVSTTNRNFPGRMGDKEGQIYLASPYTTAASAVTGYVTDPREVYDFDANKRHPTETL 498          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: A0A6P0Y465_9CYAN (3-isopropylmalate dehydratase (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0Y465_9CYAN)

HSP 1 Score: 172 bits (436), Expect = 5.410e-53
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 0
Query:   19 HQVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPRE 126
            HQV+VPT+LVPATQ VYND+ ++K +G+TL+ IF  AGCLEPA PSCAAC+GGP DT+ R+NE   CVSTTNRNFPGRMG+K A IYLASPYTAAASA+TG VTDPRE
Sbjct:    4 HQVKVPTYLVPATQTVYNDLFSIKHDGQTLSEIFLNAGCLEPAPPSCAACVGGPLDTFGRLNEAHVCVSTTNRNFPGRMGNKQAQIYLASPYTAAASAITGYVTDPRE 111          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: A0A2V3INF8_9FLOR (3-isopropylmalate dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INF8_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 8.390e-52
Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDL 141
            +V VPTFLVPAT+KVY+D++ L+I G TL  IF  AGC+   +P CAACLGGP+DT+AR+NEP  CVSTTNRNFPGRMGHK+  IYLASPYTAAASAVTG VTDPREV+DFD ++R   E L
Sbjct:  460 KVSVPTFLVPATKKVYDDVENLRINGETLKEIFVNAGCIGLGNPGCAACLGGPSDTFARLNEPLVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASAVTGYVTDPREVYDFDMSERHPTETL 581          
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Match: UPI001FBA0E57 (3-isopropylmalate dehydratase large subunit n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001FBA0E57)

HSP 1 Score: 177 bits (450), Expect = 3.390e-51
Identity = 83/107 (77.57%), Postives = 96/107 (89.72%), Query Frame = 0
Query:   20 QVRVPTFLVPATQKVYNDIQTLKIEGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGCVTDPRE 126
            +V+VPT+LVPATQKVY D+  LK EG+TL+ IF EAGC+EPA+PSCAACLGGP DT+ R+NEP  CVSTTNRNFPGRMG+K+AGIYLASPYTAAASA+TG VTDPRE
Sbjct:  329 KVKVPTYLVPATQKVYEDLFKLKYEGQTLSEIFLEAGCIEPAAPSCAACLGGPKDTFGRVNEPEVCVSTTNRNFPGRMGNKEAGIYLASPYTAAASALTGYVTDPRE 435          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12001.1719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5W8_ECTSI3.140e-7791.87Putative homoaconitate hydratase, c-terminal part ... [more]
A0A6H5KHV3_9PHAE3.260e-7491.873-isopropylmalate dehydratase n=1 Tax=Ectocarpus s... [more]
X2KY86_SCYLO2.040e-7391.873-isopropylmalate dehydratase n=1 Tax=Scytosiphon ... [more]
A0A835YVF1_9STRA9.440e-6785.373-isopropylmalate dehydratase n=1 Tax=Tribonema mi... [more]
W7TZ20_9STRA9.880e-5874.603-isopropylmalate dehydratase n=2 Tax=Monodopsidac... [more]
A0A5J4YMP4_PORPP4.390e-5571.543-isopropylmalate dehydratase n=1 Tax=Porphyridium... [more]
R7QD35_CHOCR3.660e-5371.313-isopropylmalate dehydratase n=1 Tax=Chondrus cri... [more]
A0A6P0Y465_9CYAN5.410e-5374.073-isopropylmalate dehydratase (Fragment) n=1 Tax=O... [more]
A0A2V3INF8_9FLOR8.390e-5269.673-isopropylmalate dehydratase n=1 Tax=Gracilariops... [more]
UPI001FBA0E573.390e-5177.573-isopropylmalate dehydratase large subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015931Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3GENE3D3.30.499.10coord: 7..127
e-value: 8.6E-31
score: 108.7
IPR001030Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainPFAMPF00330Aconitasecoord: 20..119
e-value: 8.3E-16
score: 58.0
NoneNo IPR availablePANTHERPTHR43822:SF6coord: 16..127
NoneNo IPR availablePANTHERPTHR43822FAMILY NOT NAMEDcoord: 16..127
IPR036008Aconitase, iron-sulfur domainSUPERFAMILY53732Aconitase iron-sulfur domaincoord: 18..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12001contigEcto-sp13_S_contig12001:164..2781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12001.1719.1mRNA_Ecto-sp13_S_contig12001.1719.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12001 18..3842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12001.1719.1 ID=prot_Ecto-sp13_S_contig12001.1719.1|Name=mRNA_Ecto-sp13_S_contig12001.1719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MAALLNVRVSLSVQYSFCHQVRVPTFLVPATQKVYNDIQTLKIEGRTLAS
IFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK
DAGIYLASPYTAAASAVTGCVTDPREVFDFDKNKRWAVEDLLMKESSAQA
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015931Acnase/IPM_dHydase_lsu_aba_1/3
IPR001030Acoase/IPM_deHydtase_lsu_aba
IPR036008Aconitase_4Fe-4S_dom