mRNA_Ecto-sp13_S_contig6434.17194.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI) HSP 1 Score: 950 bits (2456), Expect = 0.000e+0 Identity = 516/583 (88.51%), Postives = 532/583 (91.25%), Query Frame = 1
Query: 169 LPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGH-GFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRDKEDGEGEEEESRSAPVVSICAELTRDDSEPGPGDEPVGNPDADGPW--AATAAAVATGRTEGSASASGVRTWSRLEVAGRRVGRAVAITAALQRLELRPVDDAGSGDSSALSNRVNGGGGVLVGITDATGELLLPGKAGGAATVTNAIAGVANAHPSASFREGFRVVG 1908
L QSFFNEEKERELALRQHGQ RGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQA WLRGADKLSWSLPEQQFKQVKAYTPVCKVHVY TDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMA DPQEDPGR+G+EQ+GRPNSGTGGHRGNDSA PAS ASF+GGSPT+ASERTMP PVAAAAAA GLED +VAVHTGVDST SE+E PLAA TAVDAVSDLDALPVGPGADGQDARTFSLAIS+KGAAGLSGLAAAVAG DGGG GFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLC FLAEAPPLQVYLCTEG ILAHADVDMSLLLP E+WQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRD+ DG GEEE SR PVVSICAELT+ DSEPGPGDE VG+PDA G W ATAAA A GRTEGSA ASGV+TWSRL V G+RVGRAVAITAALQRLELRPVDD GSGD SALSNRVNGGGGVLVGITDAT ELLL K GGAAT T+AIAGVANA+PSASFRE FRVVG
Sbjct: 54 LNQSFFNEEKERELALRQHGQXXXXXXXRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQATWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYVTDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMARDPQEDPGREGYEQQGRPNSGTGGHRGNDSAKLPASGASFEGGSPTAASERTMPLPVAAAAAA-GLEDDEVAVHTGVDSTASEAEAPLAASTAVDAVSDLDALPVGPGADGQDARTFSLAISVKGAAGLSGLAAAVAGGDGGGPAGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCRFLAEAPPLQVYLCTEGRILAHADVDMSLLLPTEEWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRDEYDGGGEEE-SRDPPVVSICAELTKADSEPGPGDELVGSPDAGGLWPATATAAAAAMGRTEGSAGASGVKTWSRLAVVGKRVGRAVAITAALQRLELRPVDDPGSGDGSALSNRVNGGGGVLVGITDATRELLLSAKTGGAATATDAIAGVANANPSASFRESFRVVG 634
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A6H5JVP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP1_9PHAE) HSP 1 Score: 862 bits (2226), Expect = 9.570e-303 Identity = 487/635 (76.69%), Postives = 503/635 (79.21%), Query Frame = 1
Query: 136 EITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYL----------------------------C------------------------------TEGHILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRDKEDGEGEEEESRSAPVVSICAELTRDDSEPGPGDEPVGNPDADGPWAATAAAVATGRTEGSASASGVRTWSRLEVAGRRVGRAVAITAALQRLELRPVDDAGSGDSSALSNRVNGGGGVLVGITDATGELLLPGKAGGAATVTNAIAGVANA 1866
EITV VRSLRHLPQSFFNEE EREL LRQHGQQQ HQHGRGSVDYR+CLRAQ+NIANETRETGNS WGRG RSRQAMWLRGADK+SWSLPEQQFK+V AYTPVCKVHVYA DPNSPTMDTSDSVGW IVDMRDLAGQRQQE WVKLQGASPAEVLISS LAMA DPQEDP R+GHEQRGRPNSG HRGNDSA P AS+ASFDGGSPT+ASERTMPFPVAAAA AAGLEDG EPLAA TAVDAVSDLDALPVGPGADGQDARTFSLAIS+KGAAGLSGLAAAVAG+DGGG GF ESLGPPP GGGA+L+PM+DSF LRA LQGLCHFLAEAPPLQVYL C TEG ILAHADVDMSLLLPREQWQGRSTCEFGSTG+EG FQLHLPGEPLAAPQQRDKEDGEG EEES+S PV SICAELTR DSEPGPGDEPVG+PDADG WAATAAAVATGRTEGSASASGVRTWSRL VAGRRVGRAVA TAALQR ELRPVD GSG SALSNRVNGGGG LVGITDATGELLL GKAGGAA T+AIAGVANA
Sbjct: 58 EITVEVRSLRHLPQSFFNEENERELVLRQHGQQQRHQHGRGSVDYRKCLRAQSNIANETRETGNSTWGRGGRSRQAMWLRGADKVSWSLPEQQFKEVNAYTPVCKVHVYAIDPNSPTMDTSDSVGWLIVDMRDLAGQRQQEHWVKLQGASPAEVLISSRLAMARDPQEDPCREGHEQRGRPNSG---HRGNDSAKPSASKASFDGGSPTAASERTMPFPVAAAAPAAGLEDG----------------EPLAASTAVDAVSDLDALPVGPGADGQDARTFSLAISVKGAAGLSGLAAAVAGSDGGGPGF----------------ESLGPPPTGGGAMLDPMLDSFWLRAALQGLCHFLAEAPPLQVYLGTEGRILAHADVDMSLLLPREQWQGRGTCEFGSTXGGRQRNTTSFASRPLPLTLAVYLGTEGRILAHADVDMSLLLPREQWQGRSTCEFGSTGIEGYFQLHLPGEPLAAPQQRDKEDGEGGEEESQSPPVASICAELTRADSEPGPGDEPVGSPDADGLWAATAAAVATGRTEGSASASGVRTWSRLAVAGRRVGRAVAFTAALQRPELRPVDHPGSGGGSALSNRVNGGGGALVGITDATGELLLSGKAGGAAMATDAIAGVANA 657
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A6H5L783_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L783_9PHAE) HSP 1 Score: 572 bits (1475), Expect = 5.190e-200 Identity = 303/324 (93.52%), Postives = 310/324 (95.68%), Query Frame = 1
Query: 127 MLQEITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQ 1098
MLQEITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISS LAMA DPQED R+GHEQRGRPNSGTGGHRGNDSA PPAS+ASFDGGSPT+ASERTMPFPVAAAA AAGLEDG+VAVHTGVDST SESEEPLAA TAVDAVSDLDALPVGPGADGQDA+TFS AISIKGAAGLSGLAAAV G+DGGG GFWLS +F VVVQ
Sbjct: 1 MLQEITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSRLAMARDPQEDSCREGHEQRGRPNSGTGGHRGNDSAKPPASKASFDGGSPTAASERTMPFPVAAAAPAAGLEDGEVAVHTGVDSTVSESEEPLAASTAVDAVSDLDALPVGPGADGQDAQTFSPAISIKGAAGLSGLAAAVTGSDGGGPGFWLSCFMFRVVVQ 324
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A6H5JX35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX35_9PHAE) HSP 1 Score: 567 bits (1461), Expect = 2.020e-195 Identity = 357/592 (60.30%), Postives = 373/592 (63.01%), Query Frame = 1
Query: 136 EITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRCLRAQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRDKEDGEGEEEESRSAPVVSICAELTRDDSEPGPGDEPVGNPDADGPWAATAAA-VATGRTEGSASASGVRTWSRLEVAGRRVGRAVAITAALQRLELRPVDDAGSGDSSALSNRVNGGGGVLVGITDATGELLLPGKAGGAATVTNAIAGVANAHPSASFREGFRVVG 1908
EITV VRSLRHLPQSFFNE+KE+ELALRQHGQQQ HQ GRGSVDYR+C RAQANIANETRETGNS WGRG RSRQAMWLRGADK+SWSLPEQQFKQV AYTPVCKVHV+AT+P+SPTMDTSDSVGWFIVDMRDL GQRQQERWVKLQGASPAEVLISS LAMA DPQEDP R+GHEQRGRPNSG HRGNDSA P AS+ASF+GGSPT+AS GAV S R C A GR EG FQLHLPGEPLAAPQQRDKEDGEG EEES+S PV SICAELTR DSEPGPGD PVG+ DADG WAATAAA VATGRTEGSASASGVRTWSRL VAGRRVGRAVAITAALQR ELRPVD GS D SALSNRVNGGGGVLVGITDATGEL + GKAGGAAT T+AIAGVANA+PSAS REGFRVVG
Sbjct: 59 EITVEVRSLRHLPQSFFNEDKEKELALRQHGQQQRHQRGRGSVDYRKCWRAQANIANETRETGNSTWGRGGRSRQAMWLRGADKVSWSLPEQQFKQVNAYTPVCKVHVHATNPDSPTMDTSDSVGWFIVDMRDLTGQRQQERWVKLQGASPAEVLISSRLAMARDPQEDPCREGHEQRGRPNSG---HRGNDSAKPSASKASFEGGSPTAAS---------------------------------------------------------------------------------------------------------------------------GAV------SRR----------------------CXXXXXXA----------------GRRR--------EGYFQLHLPGEPLAAPQQRDKEDGEGGEEESQSPPVASICAELTRADSEPGPGDGPVGSSDADGLWAATAAAAVATGRTEGSASASGVRTWSRLAVAGRRVGRAVAITAALQRPELRPVDHPGSRDGSALSNRVNGGGGVLVGITDATGELFMSGKAGGAATATDAIAGVANANPSASLREGFRVVG 472
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A6H5LE02_9PHAE (DUF3668 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE02_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 1.030e-136 Identity = 232/253 (91.70%), Postives = 238/253 (94.07%), Query Frame = 1
Query: 1147 VLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQQRDKEDGEGEEEESRSAPVVSICAELTRDDSEPGPGDEPVGNPDADGPWAATAAAVATGRTEGSASASGVRTWSRLEVAGRRVGRAVAITAALQRLELRPVDDAGSGDSSALSNRVNGGGGVLVGITDATGELLLPGKAGGAATVTNAIAGVANAHPSASFREGFRVV 1905
+LEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEG ILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQ+RDKEDGEG EEES+S PVVSICAELTR DSEPGPGDEPVGNPDADG WAATAAAVATGRTEGSASASGVRTWSRL VAGRRVGRAVAITAALQRLELRPVD GSG ALSNRVNGGGGVLVGITDATGELLL GKAGGAAT T+AIAGVA+ +PSAS REGFRVV
Sbjct: 1 MLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGRILAHADVDMSLLLPREQWQGRSTCEFGSTGMEGDFQLHLPGEPLAAPQKRDKEDGEGGEEESQSPPVVSICAELTRADSEPGPGDEPVGNPDADGLWAATAAAVATGRTEGSASASGVRTWSRLAVAGRRVGRAVAITAALQRLELRPVDHPGSGGGLALSNRVNGGGGVLVGITDATGELLLSGKAGGAATATDAIAGVAHPNPSASLREGFRVV 253
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A835Z851_9STRA (DUF3668 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z851_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.470e-32 Identity = 114/365 (31.23%), Postives = 158/365 (43.29%), Query Frame = 1
Query: 310 TRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMDTSDSVGWFIVDMRDLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQTDRF-----ESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQWQG------RSTCEFGSTGMEGDFQLH 1371
T ETG S+WGRG +SR A+W + L++ + E + KAY P KV + A D ++P + D VGWF +D+RDLA R +++WVKLQG PAEV +S L + + + S TS+ R P P A DALPVG A DAR F+L+++I A+ L+ A +AG G WLSYS+F +VVQT++F + GG + P D+FRLRATL GL L PL+VY+CT G ++ + ++ LLP + G R F E LH
Sbjct: 14 TAETGCSSWGRGTQSRDALWGKAGGTLAFRVTEAALRDAKAYNPKLKVQLIAVDASAPALTDGDFVGWFALDLRDLASGRMEQQWVKLQGCLPAEVQVSGCLRVVPEELQQAQEXXXXXXX--------------XXXXXXXXXXXAPSQTSSVIRE-PSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAA------DALPVGDDAASPDARMFTLSLTIMRASNLAQSAPDLAGT---GARVWLSYSLFDIVVQTEQFSIGSGDGTSGGSGGGTEAMTPACDAFRLRATLGGLARHLHALSPLRVYVCTHGRVIGAVHLPLAQLLPLDVPSGGSGGGGRGAARFSRAAFEAALPLH 354
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A5A8DH65_CAFRO (DUF3668 domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DH65_CAFRO) HSP 1 Score: 105 bits (263), Expect = 7.480e-20 Identity = 110/363 (30.30%), Postives = 162/363 (44.63%), Query Frame = 1
Query: 286 AQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMD--TSDSVGWFIVDMRDL-----AGQRQQERWVKLQG---ASPAEVLISSSLAMAHDPQED------PGRDGHEQRGRPN-SGTGGHRGNDSANPPASRA--------SFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLP 1299
AQA + RET + +GRG R +W R + +LSW P F+ +K+ P KV+V + TS+S+GWF++D+R + + ++ W + G A A V +++ A+ + + D P + E RG P +G+ D PP RA S DG P++AS+ + V A E AA A+ A S DA+PVG G+ + F L +S+ AA L + +A G WLSY +FGV+VQ+D F+ P PM D F + A L FL PPL V+LCT G +LA A + ++ LLP
Sbjct: 31 AQATLEGAFRETQPAIFGRGTREYDPLWPRDSGELSWEAPYSAFQALKSSAPHVKVYVEWRQGAAAGRSEATSESLGWFVIDLRHVEAGLSSSVNRRLTWETVHGGGKAFGASVRVAT-WAVVLESEGDAGAAVAPAQQAGEPRGVPQPAGSRPAVRPDRPAPPRPRATEGTDADWSSDGTPPSAASDAPLVRMVPRA-------------------------ETSAAPAALRASS--DAIPVG----GRGGQRFVLRVSLSAAAALDRIPSAARLCSVPGRRLWLSYRLFGVLVQSDAFDDPSNP------AFRPMRDGFAIAAHPADLLRFLRAQPPLPVHLCTAGAVLATASLPLAQLLP 355
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A5A8CFV4_CAFRO (DUF3668 domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CFV4_CAFRO) HSP 1 Score: 105 bits (262), Expect = 8.620e-20 Identity = 110/363 (30.30%), Postives = 162/363 (44.63%), Query Frame = 1
Query: 286 AQANIANETRETGNSAWGRGVRSRQAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYATDPNSPTMD--TSDSVGWFIVDMRDL-----AGQRQQERWVKLQG---ASPAEVLISSSLAMAHDPQED------PGRDGHEQRG-RPNSGTGGHRGNDSANPPASRA--------SFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGGHGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLP 1299
AQA + RET + +GRG R +W R + +LSW P F+ +K+ P KV+V + TS+S+GWF++D+R + + ++ W + G A A V +++ A+ + + D P + E RG P +G+ D PP RA S DG P++AS+ + V A E AA A+ A S DA+PVG G+ + F L +S+ AA L + +A G WLSY +FGV+VQ+D F+ P PM D F + A L FL PPL V+LCT G +LA A + ++ LLP
Sbjct: 31 AQATLEGAFRETQPAIFGRGTREYDPLWPRDSGELSWEAPYSAFQALKSSAPHVKVYVEWRQGAAAGRSEATSESLGWFVIDLRHVEAGLSSSVNRRLTWETVHGGGKAFGASVRVAT-WAVVLESEGDAGAAVAPAQQAGEPRGVPPPAGSRPAVRPDRPAPPRPRATEGTDADWSSDGTPPSAASDAPLVRMVPRA-------------------------ETSAAPAALRASS--DAIPVG----GRGGQRFVLRVSLSAAAALDRIPSAARLCSVPGRRLWLSYRLFGVLVQSDAFDDPSNP------AFRPMRDGFAIAAHPADLLRFLRAQPPLPVHLCTAGAVLATASLPLAQLLP 355
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: V9FCV7_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FCV7_PHYPR) HSP 1 Score: 89.0 bits (219), Expect = 1.560e-14 Identity = 101/357 (28.29%), Postives = 151/357 (42.30%), Query Frame = 1
Query: 358 QAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVYA------TDPNSPTMDTSD---------SVGWFIVDMR--DLAGQRQQERWVKLQGASPAEVLISSSLAMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGG---HGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQW-QGRSTCEFGST-GMEGDF 1362
+A W+RG KL W+ P ++F+++KAYTP K VY +P+ M+ S GWF +D+R DL ERW+KLQ + ++ SS+ M + + S +R G S A +T+ A A V T V E L +G G+ GQD F L++ I+ A L + + G + GFWLSYS+F VVVQTD F +L A P+ DSFR++ +L L L L V++CTE +LA ++ + LLL + + +GR+ G+T ++G F
Sbjct: 173 EAKWMRGDGKLRWTFPMEKFRRLKAYTPRIKAFVYGIGEAGVVNPSRAQMENLPRQEKEGEILSFGWFFLDLRTPDLP-----ERWLKLQNSPFGGEILISSIFMPVELSDA----------------------QSVKHSVARPEDRGLSNVRAESQTVRVNKAEA------------VPTVVSGKSGEY------------------LQIGDGS-GQD--IFVLSVFIQAAFNLLNVVESSMGENRQELEQTGFWLSYSLFDVVVQTDIFHNLNV------AEFSPIRDSFRVKTSLTDLALCLKALGNLSVFMCTENRVLAGVEIPLQLLLSKGLFGEGRNKIRPGNTVDIDGKF 463
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Match: A0A0W8C1H8_PHYNI (Centrosomal protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C1H8_PHYNI) HSP 1 Score: 88.2 bits (217), Expect = 1.840e-14 Identity = 107/361 (29.64%), Postives = 151/361 (41.83%), Query Frame = 1
Query: 358 QAMWLRGADKLSWSLPEQQFKQVKAYTPVCKVHVY------------ATDPNSPTMDTSDSV---GWFIVDMR--DLAGQRQQERWVKLQGASP--AEVLISSSL--AMAHDPQEDPGRDGHEQRGRPNSGTGGHRGNDSANPPASRASFDGGSPTSASERTMPFPVAAAAAAAGLEDGKVAVHTGVDSTGSESEEPLAALTAVDAVSDLDALPVGPGADGQDARTFSLAISIKGAAGLSGLAAAVAGADGGG---HGFWLSYSIFGVVVQTDRFESLGPPPPGGGAVLEPMMDSFRLRATLQGLCHFLAEAPPLQVYLCTEGHILAHADVDMSLLLPREQW-QGRSTCEFGST-GMEGDF 1362
+A W+RG KL W+ P ++F+++KAYTP K VY A N P + + GWF +D+R DL ERW+KLQ SP E+LISS D Q S +R G S A +T+ A A V T V E L +G G+ GQD F L++ I+ A L + + G + GFWLSYS+F VVVQTD F +L A P+ DSFR++ +L L L L V++CTE +LA ++ + LLL + + +GR+ G+T ++G F
Sbjct: 173 EAKWMRGDGKLRWTFPMEKFRRLKAYTPRIKAFVYGIGEAGVGNPSRAQMENLPRQEKEGEILSFGWFFLDLRTPDLP-----ERWLKLQN-SPFGGEILISSIFMPVKLSDAQ-------------------------SVKHSVARPEDRGLSNVRAESQTVRVNKAEA------------VPTVVSGESGEY------------------LQIGDGS-GQD--IFVLSVFIQAAFNLLNVVESSMGENRQELEQTGFWLSYSLFDVVVQTDIFHNLNV------AEFSPIRDSFRVKTSLTDLALCLKALGNLSVFMCTENRVLAGVEIPLQLLLSKGLFGEGRNKIRPGNTVDIDGKF 463 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6434.17194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6434.17194.1 >prot_Ecto-sp13_S_contig6434.17194.1 ID=prot_Ecto-sp13_S_contig6434.17194.1|Name=mRNA_Ecto-sp13_S_contig6434.17194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=594bp MLQEITVVVRSLRHLPQSFFNEEKERELALRQHGQQQGHQHGRGSVDYRRback to top mRNA from alignment at Ecto-sp13_S_contig6434:2971..6975- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6434.17194.1 ID=mRNA_Ecto-sp13_S_contig6434.17194.1|Name=mRNA_Ecto-sp13_S_contig6434.17194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4005bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6434:2971..6975- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6434:2971..6975- >mRNA_Ecto-sp13_S_contig6434.17194.1 ID=mRNA_Ecto-sp13_S_contig6434.17194.1|Name=mRNA_Ecto-sp13_S_contig6434.17194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1782bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6434:2971..6975- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |