mRNA_Ecto-sp13_S_contig6423.17185.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6423.17185.1
Unique NamemRNA_Ecto-sp13_S_contig6423.17185.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 1188 bits (3073), Expect = 0.000e+0
Identity = 618/648 (95.37%), Postives = 625/648 (96.45%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSAPFPYATECAATATATCDPEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEGDYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            SYGLSVTTLEEVFLRVANGTADV ARKEIAGISMMRQSSYSSTMM+A              KEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSAPFPYATECAATATATCDPEVLVAEMDIS SAEPVVLGIPATADESGAVELMSEALLEG+YEDNVYGAVSFREADSSTETYD+TVHANYSALHSAPLYVNQINTALLRLVTGN DLSIAVTMHPLPRTPREEDIDSGFNSFNVS+FMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSL+PPVAFTLIVLAAADV ALISGENGVATFLLFLLFGFSMPCYTYLWSFLF NYSKAQNAFLFHNWITGLILPIATTIMSLFEG VSDVGRG+AAVLRIVPSFALGDGLMNMSFMEFFGFLDD+DYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEID DVRAEMDRVAGGGADNDVVKVKGLRKVYP S GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK
Sbjct: 1002 SYGLSVTTLEEVFLRVANGTADVEARKEIAGISMMRQSSYSSTMMEAATTKMAANVVGGGGKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSAPFPYATECAATATATCDPEVLVAEMDISGSAEPVVLGIPATADESGAVELMSEALLEGEYEDNVYGAVSFREADSSTETYDFTVHANYSALHSAPLYVNQINTALLRLVTGNSDLSIAVTMHPLPRTPREEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMPCYTYLWSFLFKNYSKAQNAFLFHNWITGLILPIATTIMSLFEGAVSDVGRGMAAVLRIVPSFALGDGLMNMSFMEFFGFLDDKDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDEDVRAEMDRVAGGGADNDVVKVKGLRKVYPASGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1649          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 914 bits (2362), Expect = 1.480e-311
Identity = 476/649 (73.34%), Postives = 534/649 (82.28%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSAPFPYATECAAT-ATATCDPEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEGDYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            SYGLSVTTLEEVFLRVANGTADVA+RKEIAGI++ RQSS+SST M A               E  GIDRSKPLFGRHM+ALLKKRLLTFKRDKKMWAFVVLMPAFFVLIG+LIL      NEP++LLTP DYN G+A FPY+T C AT A  TCDP  LV+ MD    A P+ L   A +D +  VELMS AL    Y++NVYGA SFR+ADSS  TYDYTVHANYSALHS PLY+NQ+N+A+LR+V GN+ LSI  +MHP PRT  + +IDSG +SFNV+ ++LIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSS+LWD+VSL+PP+AFTLI+LAAADV  LISGE G  TFLLFLL+G SMPCYTYLWSF F NYS AQNAFLFHNWITGLILPIAT+IM+ F+G VSD+G GIAA+ R++P +ALG GLM MSF+    F ++ +YT L   I GN+L+YM +C V++  LLLV ER SAGGS LSG+ G+L +GRSL KLTP+QLGDED ID DVRAEMDRVA G ADNDVVKV GLRKVYP S GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSA L GFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IK
Sbjct: 1023 SYGLSVTTLEEVFLRVANGTADVASRKEIAGIALKRQSSHSSTAMKAETAKIGGNIGSGKG-EGSGIDRSKPLFGRHMIALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGILILKTAGTYNEPAVLLTPADYNSGTALFPYSTHCTATSALGTCDPATLVSAMDFPAQATPLDLDTAANSD-ADVVELMSTALAGQSYDNNVYGAASFRQADSSDGTYDYTVHANYSALHSVPLYMNQVNSAILRIVAGNNALSITTSMHPFPRTSYQNNIDSGVDSFNVTFYILIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSYLWDFVSLIPPMAFTLIILAAADVDTLISGEAGATTFLLFLLYGTSMPCYTYLWSFAFKNYSTAQNAFLFHNWITGLILPIATSIMAFFDGKVSDIGDGIAALARLIPQYALGSGLMKMSFIPILSFFNNTEYTPLDGAIAGNSLIYMGVCSVVYFVLLLVFERISAGGSFLSGIYGKLVLGRSLKKLTPKQLGDEDNIDKDVRAEMDRVAAGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIK 1669          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 658 bits (1697), Expect = 1.600e-222
Identity = 331/426 (77.70%), Postives = 367/426 (86.15%), Query Frame = 1
Query:  667 ANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            ANYSALHS PLY+NQ+N+A+LR+V GND LSI  +MHPLPRT  + + DSG +SFNV+ ++LIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSS+LWD+VSL+PP+AFTLI+LAAADV  LISGE G  TFLLFLL+G SMPCYTYLWSF F NYS AQNAFLFHNWITGLILPIAT+IM+ F+G VSDVG GIA + R+VP +ALG GLM MSF+    F +D +YT L   I GN+L YM +C V++  LLLV ER SAGGS LSG+ G+L +GRSL KLTP+QLGDED ID DVRAEMDRVA G ADNDVVKV GLRKVYP S GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSA L GFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IK
Sbjct:  327 ANYSALHSVPLYMNQVNSAILRIVAGNDALSITTSMHPLPRTRYQNNFDSGVDSFNVTFYILIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSYLWDFVSLMPPMAFTLIILAAADVGTLISGEAGATTFLLFLLYGTSMPCYTYLWSFAFKNYSTAQNAFLFHNWITGLILPIATSIMAFFDGKVSDVGDGIATLARLVPQYALGSGLMKMSFIPILSFFNDTEYTPLDGAIAGNSLRYMGVCSVVYFVLLLVFERISAGGSFLSGIYGKLVLGRSLKKLTPKQLGDEDNIDEDVRAEMDRVATGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIK 752          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 573 bits (1477), Expect = 1.190e-181
Identity = 332/666 (49.85%), Postives = 434/666 (65.17%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRS-KPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGS-APFPYATECAATATA--TCDPEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEAL--LEGDYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFG----------FLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRS--LGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            SYG+SVTTLEEVFLRVA+   D    K +  +  +R+ S  S   D                ED   DRS    F    +ALLKKRLLTF+RDKKMWAFVVLMP  F+  G L++L     ++P++ L+P+ YN+G  APFP+ATEC+ T      CDP VL+  +D  DSA+ V L +   A+   AV  ++ AL      Y++ V+GA+SFREAD++  T+DYT+H+NYSALHSAP+Y+NQ+N+A+LRL++G+ + SI   MHP+P T   E+I     +F + +F ++AFSFVPA W+ +IVREK+TKCKHQQ+VSGVGLEAYW SSFLWD+ S + P+ F +++     V +L       A  LLF+LFG SM  YTYL SF+F+++SKAQN +LFHN++ G++ P+A   +   E    D    +  VL + P       L+ + F    G          F DD D     +R    +L YMA   V++   LL+ ER SAGGS LS LCG+ +VG S  L  ++P+QLG+ D +D DV  E +RV  GG D D VK++G+ KVYPT  GAKVAVKSTSLGIP+G+CFGLLGINGAGKSS L+ILSG +P T G+A L G DVGK PE IHRL+GYCPQFDALFETLTGREHL LYA+IK
Sbjct: 1018 SYGMSVTTLEEVFLRVASEATD---HKNLGHLGRLRRES--SHASDMEKVATPNESVQRGVTEDRSSDRSWTSAFLYQTLALLKKRLLTFRRDKKMWAFVVLMPVVFIGTGALLILDFDIKDQPALALSPQVYNNGGGAPFPFATECSDTIATDGVCDPGVLMESLDNPDSAQEVDLELSPDAESGEAVGELNTALSVFPNSYDNRVFGALSFREADTAAATFDYTIHSNYSALHSAPVYLNQMNSAILRLLSGDPEQSIKTVMHPMPETADVEEILDFVQTFFIIIFTIMAFSFVPAGWIMFIVREKDTKCKHQQIVSGVGLEAYWFSSFLWDFGSFLVPMTFAIVLFKGLGVDSLFENGADAAFVLLFILFGLSMVPYTYLGSFMFSSHSKAQNLWLFHNFVLGILGPVALFSIP-NEKWYQD---ALLFVLNLFPQVCFSFALLVLGFTNVVGGDEEGEGEDDFEDDFDPFDKFVR---RSLTYMACEVVVYTIFLLLIERYSAGGSCLSSLCGKAAVGASTLLSSVSPQQLGEGDVLDEDVARETERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIK 1671          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 409 bits (1050), Expect = 7.320e-122
Identity = 265/666 (39.79%), Postives = 383/666 (57.51%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLL-TPEDYND--------GSAPFPYATECAATATATCDPEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEG--DYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVS-LVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDE--DYTALSMRITGNALLYMAICGVI-FLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTS---RGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            +YG+SVTTLEEVFLRVA G  +   + ++A    + +S   S  + A              K +     +  LF +H   L+ KR   +KRD+K W F +L PA F+L+G+ IL   +   +PS+ +   E+YN         G  P  YA      A+ATC     V E     +   V   +    D +  V  ++E L+    DY+ + YGA  F  AD++ + Y   VH N++A H+AP ++N +N A+L+ V G   LS+A+   PL  T     +D   + F V++FM +AF+F+PA +  Y++RE+E K KHQQVVSGV L AYWLSS+ WD+   L+ P   T I+LAA D+ AL++G+ G A  L  LL G ++  +TYL +F F + S      L  N   GL+L +   IM L   T   V + +  + R+ P +  G+ +++++F EF   +DD     +     I+G  L+++A   V+ FLG+LLV ER SAG + L+    RL +    GK    +    +E+DADV  E DRV GGGA+ DV+++  +RK +P     RG K AV+  SLGIPRG+CFGLLGINGAGK++TL ILSGE PPT G+A+L+G ++ +NPEE HRL+GYCPQFDA+F +LTGRE+L LY  +K
Sbjct: 1008 AYGISVTTLEEVFLRVAAGLHEPETQAQLAKSRGLSRSRSLSAEVGAAKAAQPAWKDDARWKAEAVTGAA--LFRQHFTTLMVKRFWNYKRDRKAWGFTLLAPALFLLLGLGILQIDSNWTQPSLTIGLAENYNTKLGSSAAGGQQPVFYACN----ASATCADAQGVMEQMTDATPYDVSDDLSTATDNNSTVWHLNEHLVTTIEDYQASRYGAYYFTAADAAADEYAANVHLNFTAAHAAPAFINALNEAVLK-VAGGASLSLALREFPLGETSAMLALDGSVDGFTVTIFMTMAFAFIPAGFAQYVIREREMKTKHQQVVSGVSLNAYWLSSYAWDFCQYLLGPFLLTEILLAAFDIEALVNGDGGGAACLALLLNGLAIVPFTYLLTFFFKSASVGTVLVLILNIALGLLLTMVMFIMLLIPST-QKVAKKLQWLFRLFPPYCFGNTMLSVAFREFLSLIDDAPGSLSPWDNTISGYNLVFLAWEAVVYFLGVLLV-ERLSAGSNPLAQKLDRLKL---RGKRYAPRDPPREEVDADVAEEEDRVLGGGAEGDVIRIHRIRKAFPDGPCGRGYKEAVRGLSLGIPRGQCFGLLGINGAGKTTTLTILSGEQPPTEGAAFLAGLNIAENPEEAHRLIGYCPQFDAIFGSLTGRENLWLYGRLK 1661          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A6H5KNW1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW1_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 4.160e-115
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 1
Query: 1384 MRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            MRITGNALLYMA CGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTS GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK
Sbjct:    1 MRITGNALLYMATCGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 187          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A4D9D3B3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3B3_9STRA)

HSP 1 Score: 382 bits (981), Expect = 1.080e-112
Identity = 263/713 (36.89%), Postives = 384/713 (53.86%), Query Frame = 1
Query:    4 YGLSVTTLEEVFLRVANGTA-DVAARKEIA-----------GISMMRQSSYSSTM--------MDAXXXXXXXXXXXXXXKEDLGIDRSKP--------------------------LFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLA----VAATNEPSMLLTPEDYNDGSA----PFPYATECAATATATCD-------PEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEG--DYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTE---RASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            YG+SVTTLEEVF+RV  G   DV A+  I+            +  +R +S   T+          A               +  GI   K                            F RHM ALL KR+L  KRDKK W +  ++PA FVL+G L++ A    + A   P + L+ + YN G      P PY  E  +      +       P V+    D+  +A P    +P  +  + +V+ MS  LL+   D++ + YGA++F   D   E ++Y VHANY+  HS+ ++ N IN ALL+        SI  T+ PL  T  E    + F+ F + + M++AF+F+PAA+  ++VRE+ETK KH Q+VSGV   +YWLS++L+D+ S   P+  T+++L   D  AL++G+   AT LL  LFG S+  +TYL +F F  +S+ Q A +  N++ G++L   T IM+ F  T  DV   +  + R+ P FA G+GL+N+ F +FF  LD + YT  S+ I G +++YM++  V++  L+L  E   R       L G    ++     GK     L +ED +  +  A MD +  GG   DVV +K + K Y   RG K+AV+  SLGIP GECFGLLG+NGAGK++TL+IL+ E PP++G  +L G+D+  NPE + RLVGYCPQFDALF+ LTG+EHL LYA +K
Sbjct:  802 YGVSVTTLEEVFIRVTRGDEIDVEAKAAISVRRNSLEERRRSLEELRYTSLCRTLDGTMPPQKTSAPLEIVTHSSGEALRPKTAGISDGKVPPSMKVHRGLMPCAEDQKIDFNDHWRFFRRHMYALLVKRMLYLKRDKKAWVYQFVLPALFVLVGCLLMRAGVNSIFAEKMPPLTLSLDAYNPGIQTNRNPLPYNAEGESFIFTMWEGNQQMENPNVV--GQDVIMAAIPSGSTLPTYSIAANSVQNMSSGLLDTRRDWKASRYGALTFAVVDD-LEEFNYNVHANYTGAHSSAIFANLINDALLQQYAPGS--SIKTTIKPLGVTRNEISTAASFDGFTIVIMMMLAFAFIPAAFALFVVRERETKAKHLQLVSGVSFLSYWLSTWLFDFASYQVPLWMTIVILKLFDAQALMNGKAFGATVLLMELFGTSVTGFTYLTTFSFRRHSRIQVATIMLNFMCGVVLVTLTVIMT-FIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLCVEYLIRRPTVSKLLEGGSSSMAAKDCSGK-DEAVLEEEDRVRRE--ATMDTMKAGG---DVVVIKDMTKTY---RGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYARVK 1499          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A7S4D9H3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9H3_HETAK)

HSP 1 Score: 377 bits (969), Expect = 6.010e-111
Identity = 256/692 (36.99%), Postives = 362/692 (52.31%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSM------LLTPEDYNDGSAPFPYATECAATATATCDPEVLVAEMDISD-----------SAEPVVLGIPATADE-------------------SGAVELMSEALLE--GDYEDNVYGAVSFREADSSTETYDY--TVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWD-YVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDD---EDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            +YG+SVTTLEEVFLRVA G  D   +K       MR++S S   +DA                  G+     LF  ++  L KKR   +KRD+K W F  + PA F+  G+L+L A ++  +PS+      L       + + P  YA  C       C  ++      ISD            A+     + +T+D                    S  +  M+  LL+   D + + YGAV F +  SS+   DY  T+  N++ LH+AP ++N +N AL++ V G+ ++SI V   PL  T  E     G + F V++F+L AF+FVPA +  Y+V EKE K K+QQVVSGV L AYWLSS++WD +  L  P+A  + +L   DV  L+ G    AT  LF+LFG ++  +TY+ SF F +   AQN  +  NWI GL+L   T IMSL   T  D    +    R+ P +   D L+ +SF +F  F D     D +     + G  + ++    + +  LLL  ERA+AG S L+    R++                     DV+ E  RV  GG   DV++V GLRK +P+  G K AV+  +LG+PRGECFGLLGINGAGKS+T++IL+GE PPT+G   L+G DV  + E +H+LVGYCPQFDA+F  LTGRE+L +Y  IK
Sbjct:  991 TYGVSVTTLEEVFLRVAEGKFDEEIQKT------MRENSMSIASIDAANQDLWKLDDSWKKDRIKGMG----LFLMNLTILFKKRFWNYKRDRKAWVFTFISPAVFIFAGLLVLQATSSWVKPSLKLEISALFNRNTRKEPTQPVLYADSCFVQNGTLCSADIENLMSGISDIDAMQCDFSWFDADYKFAAVNSTSDSYEQDSSSILDFQNYLNARGSEEIYTMNSYLLDTKNDQDASRYGAVYFEDTSSSSTLVDYKITLLTNFTGLHAAPAFLNVVNEALIQKVLGDHEISITVRSFPLDLTQFELSQKQGIDGFTVTIFILFAFAFVPAGFAQYVVHEKEMKIKYQQVVSGVNLNAYWLSSWIWDSFQYLAGPMALCIAMLYIFDVEILV-GNAVDATLTLFILFGLAVVPFTYICSFFFNSAPVAQNLSILMNWIFGLLLMCTTFIMSLIPSTQGDAVL-LRRAFRVFPQYCFADALLRVSFRDFLYFFDSAVPRDPSPWHPEVAGLDIAWLGGEVLAYGLLLLAAERAAAGSSPLAR---RVAAAXXXXXXXXXXXXXXXXXXXDVQEEQARVEAGGPHGDVIRVHGLRKAFPSRGGFKEAVRGLTLGVPRGECFGLLGINGAGKSTTMSILTGEQPPTSGRGELAGMDVTADAERVHQLVGYCPQFDAIFPLLTGRENLRIYGRIK 1667          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A4D9DBM5_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBM5_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.450e-109
Identity = 225/583 (38.59%), Postives = 340/583 (58.32%), Query Frame = 1
Query:  256 LLTFKRDKKMWAFVVLMPAFFVLIGVLILLA----VAATNEPSMLLTPEDYNDGSA----PFPYATECAATATATCD-------PEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEG--DYEDNVYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGFLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTE---RASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            +L  KRDKK W +  ++PA FVL+G L++ A    + A   P + L+ + YN G      P PY  E  +      +       P V+    D+  +A P    +P  +  + +V+ MS  LL+   D++ + YGA++F   D   E ++Y VHANY+  HS+ ++ N IN ALL+        SI  T+ PL  T  E    + F+ F + + M++AF+F+PAA+  ++VRE+ETK KH Q+VSGV   +YWLS++L+D+ S   P+  T+++L   D  AL++G+   AT LL  LFG S+  +TYL +F F  +S+ Q A +  N++ G+++ +  T++  F     DV   +  + R+ P FA G+GL+N+ F +FF  LD + YT  S+ I G +++YM++  V++  L+L  E   R       L G    ++     GK     L +ED +  +  A MD +  GG   DVV +K + K Y   RG K+AV+  SLGIP GECFGLLG+NGAGK++TL+IL+ E PP++G  +L G+D+  NPE + RLVGYCPQFDALF+ LTG+EHL LYA +K
Sbjct:    1 MLYLKRDKKAWVYQFVLPALFVLVGCLLMRAGVNSIFAEKMPPLTLSLDAYNPGIQTNRNPLPYNAEGESFIFTMWEGNQQMENPNVV--GQDVIMAAIPSGSTLPTYSIAANSVQNMSSGLLDTRRDWKASRYGALTFAVVDD-LEEFNYNVHANYTGAHSSAIFANLINDALLQQYAPGS--SIKTTIKPLGVTRNEISTAASFDGFTIVIMMMLAFAFIPAAFALFVVRERETKAKHLQLVSGVSFLSYWLSTWLFDFASYQVPLWMTIVILKLFDAQALMNGKAFGATVLLMELFGTSVTGFTYLTTFSFRRHSRIQVATIMLNFMCGVVVLVTLTVIMTFIPITRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLCVEYLIRRPTVSKLLEGGSSSMAAKDCSGK-DEAVLEEEDRVRRE--ATMDTMKAGG---DVVVIKDMTKTY---RGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYARVK 569          
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.210e-109
Identity = 243/714 (34.03%), Postives = 374/714 (52.38%), Query Frame = 1
Query:    1 SYGLSVTTLEEVFLRVANGTADVAARKEIAGI----------SMMRQSSYSSTMMDAXXXXXXXXXXXXXXKEDLGIDRSKP-----------------------LFGRHMMALLKKRLLTFKRDKKMWAFVVLMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSA-------PFPYATECAATATATCDPEVLVAEMDISDSAEPVVLG-----------IPATADESGAVELMSEALLEGDYEDNVYGAVSFREADSSTET-----YDYTVHANYSALHSAPLYVNQINTALLRLVTGNDDLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTALISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITGLILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFGF---------LDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEI-DADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1944
            SYG+SVTTLEEVF+RV +G+ D + R++ + I          S    S+  +T   +               +D G D +                         +F +H  ALL KR +  KRD K   F +++P+  VL+G+++L        PS+LLT E YN G A       PF   +            E ++   D+ ++    V G               A     +  M++ +++    D+ YG+  +     S +       DY V  N + +HS P+ +N +N A L++++ +   SI V+ HPLP+T  E+   +  ++F  ++F++IAF F+PA++  ++V+E+E K KHQQ++SGV + AYWLS+F WD  S + P   T+I + +  +   I G+  +A   + LL+G +   +TY+ S+ F+++S AQN  LF N+ITGL L I + ++++ E T  +V   +  + R+ P F LGD L  ++  +  G              D     + + G +++Y+ +  ++++ + L  E +    S +                  R  GD  E+ D DV AE +RVAGGGAD+DVV+++ LRKV+PT  G KVAVK  S GIPRGECFG LGINGAGKS+TLAILSGE PPT+G+A+++GFD+  +   I R +GYCPQFDAL E LT  EHL LYA IK
Sbjct:  388 SYGISVTTLEEVFIRVGHGSEDPSEREQDSAIRRRLSSDGSHSTGASSTSRTTYGPSLSMAGIEEVKTGPEYDDDGFDENDETALMDFTGDGFQLNDEGRQAEYRIFTKHFSALLTKRYINAKRDSKAIVFQIVVPSILVLLGLILLTIRPPIGRPSLLLTAEKYNTGLAGTLRNFVPFDAGSSPLG--------EDIMERFDLHEAHPSGVYGQYVRLEDADDQFSGCAKGPARLTAMNDYIIDSIGADDGYGSSRYVAGTISDDCERIALLDYHVMGNATGMHSHPIGLNLVNEAALKVLSADHGASIKVSSHPLPQTFTEDQNRAMEDTFTAALFIVIAFCFLPASYAIFVVKEREVKAKHQQIISGVSIYAYWLSTFAWDSASYLVPAGLTMIQMFSFGIENFIQGQGALACAAVLLLYGPATAAFTYILSYGFSSHSTAQNFVLFFNFITGLCLMITSFVLNIIENT-QEVNYSLRFLYRLFPGFCLGDALAQIAVCQDPGANCLRVTRNGYVMSDAGPFDLDVAGASMIYLIVEVIVYMAITLGIEYSLQFPSVIKYF------------QRVRDPGDASEVEDTDVAAEAERVAGGGADDDVVRLERLRKVFPTPVGPKVAVKHMSFGIPRGECFGFLGINGAGKSTTLAILSGEFPPTSGTAFIAGFDIQADQSRIRRRIGYCPQFDALLELLTVSEHLELYARIK 1080          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6423.17185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE8_ECTSI0.000e+095.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZE9_ECTSI1.480e-31173.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE1.600e-22277.70ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZA6_ECTSI1.190e-18149.85ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A7S3XYR3_HETAK7.320e-12239.79Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6H5KNW1_9PHAE4.160e-11598.93ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A4D9D3B3_9STRA1.080e-11236.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4D9H3_HETAK6.010e-11136.99Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9DBM5_9STRA1.450e-10938.59ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7S1UE30_9STRA2.210e-10934.03Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6423contigEcto-sp13_S_contig6423:422..7848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score1185.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FZE8
Model size1944
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
Exons13
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0059@2759
Ec32 ortholog descriptionAAA ATPase domain transporter protein
Ec32 orthologEc-27_001550.1
Cds size1944
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6423.17185.1prot_Ecto-sp13_S_contig6423.17185.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6423 422..7848 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463888.0587878-CDS-Ecto-sp13_S_contig6423:421..5821681463888.0587878-CDS-Ecto-sp13_S_contig6423:421..582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 422..582 -
1681463888.0718963-CDS-Ecto-sp13_S_contig6423:861..10091681463888.0718963-CDS-Ecto-sp13_S_contig6423:861..1009Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 862..1009 -
1681463888.0828478-CDS-Ecto-sp13_S_contig6423:1655..18271681463888.0828478-CDS-Ecto-sp13_S_contig6423:1655..1827Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 1656..1827 -
1681463888.0932472-CDS-Ecto-sp13_S_contig6423:2096..22181681463888.0932472-CDS-Ecto-sp13_S_contig6423:2096..2218Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 2097..2218 -
1681463888.108117-CDS-Ecto-sp13_S_contig6423:3373..34661681463888.108117-CDS-Ecto-sp13_S_contig6423:3373..3466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 3374..3466 -
1681463888.116982-CDS-Ecto-sp13_S_contig6423:4004..41391681463888.116982-CDS-Ecto-sp13_S_contig6423:4004..4139Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 4005..4139 -
1681463888.125673-CDS-Ecto-sp13_S_contig6423:4502..46851681463888.125673-CDS-Ecto-sp13_S_contig6423:4502..4685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 4503..4685 -
1681463888.1344132-CDS-Ecto-sp13_S_contig6423:5023..51661681463888.1344132-CDS-Ecto-sp13_S_contig6423:5023..5166Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 5024..5166 -
1681463888.143017-CDS-Ecto-sp13_S_contig6423:5686..58071681463888.143017-CDS-Ecto-sp13_S_contig6423:5686..5807Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 5687..5807 -
1681463888.1517143-CDS-Ecto-sp13_S_contig6423:6212..63171681463888.1517143-CDS-Ecto-sp13_S_contig6423:6212..6317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 6213..6317 -
1681463888.1605866-CDS-Ecto-sp13_S_contig6423:6645..68161681463888.1605866-CDS-Ecto-sp13_S_contig6423:6645..6816Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 6646..6816 -
1681463888.1718962-CDS-Ecto-sp13_S_contig6423:7260..74971681463888.1718962-CDS-Ecto-sp13_S_contig6423:7260..7497Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 7261..7497 -
1681463888.1815374-CDS-Ecto-sp13_S_contig6423:7695..78481681463888.1815374-CDS-Ecto-sp13_S_contig6423:7695..7848Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6423 7696..7848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6423.17185.1

>prot_Ecto-sp13_S_contig6423.17185.1 ID=prot_Ecto-sp13_S_contig6423.17185.1|Name=mRNA_Ecto-sp13_S_contig6423.17185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=648bp
SYGLSVTTLEEVFLRVANGTADVAARKEIAGISMMRQSSYSSTMMDAATN
KMAADGGGGGGKEDLGIDRSKPLFGRHMMALLKKRLLTFKRDKKMWAFVV
LMPAFFVLIGVLILLAVAATNEPSMLLTPEDYNDGSAPFPYATECAATAT
ATCDPEVLVAEMDISDSAEPVVLGIPATADESGAVELMSEALLEGDYEDN
VYGAVSFREADSSTETYDYTVHANYSALHSAPLYVNQINTALLRLVTGND
DLSIAVTMHPLPRTPREEDIDSGFNSFNVSMFMLIAFSFVPAAWMAYIVR
EKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLVPPVAFTLIVLAAADVTA
LISGENGVATFLLFLLFGFSMPCYTYLWSFLFTNYSKAQNAFLFHNWITG
LILPIATTIMSLFEGTVSDVGRGIAAVLRIVPSFALGDGLMNMSFMEFFG
FLDDEDYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLC
GRLSVGRSLGKLTPRQLGDEDEIDADVRAEMDRVAGGGADNDVVKVKGLR
KVYPTSRGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPT
TGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK
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mRNA from alignment at Ecto-sp13_S_contig6423:422..7848-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6423.17185.1 ID=mRNA_Ecto-sp13_S_contig6423.17185.1|Name=mRNA_Ecto-sp13_S_contig6423.17185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7427bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6423:422..7848- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCTACGGGTTGAGCGTGACCACCCTTGAAGAGGTGTTTTTGCGCGTGGC TAACGGCACCGCTGACGTAGCGGCTCGCAAGGAGATCGCAGGCATCTCCA TGATGCGCCAGAGCAGCTACTCCTCGACCATGATGGACGCAGCCACCAAT AAGGTGCGGTCTTTCTTTAGCAGGAAGCAGCGAGCTTAGAGCTCTCCCCC ACGCCACGTCCTCGCCGCCCATCGTACCTTTTTTCGACGTGTTAAAAACG TTTCTGCTGCAACCCTTCGCGTTGAAATTGCAACATGTACGTTGGAACGT TAGCAGATTTACTTTGGACACGTTTTTTTTTTTTTATCGCCACACGATCA GATGGCCGCGGACGGCGGCGGTGGCGGCGGCAAGGAAGACTTGGGCATCG ACCGGTCCAAGCCGCTGTTCGGCAGACACATGATGGCCCTTCTGAAAAAG CGCCTCCTAACCTTCAAGCGCGACAAGAAGATGTGGGCGTTCGTCGTGCT CATGCCGGCCTTCTTCGTGCTCATCGGCGTCCTGATCCTGCTCGCGGTTG CTGCAACCAACGAACCGTCGATGTTGCTTACGCCGGAGGTGAATAAGTCG TGCAAGGGGGGAGGTAGGCAGGAAGGCGTGCATACGTGCGAGTGTTCCAC ACTCGGAAATCGCGGTCTCGCCTTCTCTCTCTCTCTCTCTCTCCCTATCT CCTTTTCGCGTCGTTTTCTTGAACTGGCTGTGCGGAATGTTGCGCCCCTT GGGATTGTTTTGACCCTTTTTGTTTTTTTGTTTGATTCGTTGTTGCCTGC TGACAGGAAGACAAGCAGGGCAGAAACACCAACCACTTCGCTGTCCATCT CACCGCCGTCTCTCTCGGTGGAAGTCTATCCCCTGCCGACGGATCTGCCA CCTGCTCCCCACCTCTTCGAACATGCTGGAACCGAAGTTAAACCAACCTT CCGATGGCCGCACACCTATCCCCTCCCCCTCCCCCCGATCCTACGTGTTC TCTTCGTCACCCCCACCCCTTTTTTTCCCCAGGACTACAACGACGGCTCG GCGCCCTTCCCGTACGCCACCGAGTGCGCTGCCACCGCCACCGCGACGTG CGACCCGGAAGTACTGGTGGCCGAGATGGACATCTCCGATTCCGCCGAGC CTGTGGTTCTCGGTATTCCCGCTACCGCTGATGAGTCTGGCGCCGTTGAA CTGGTGGGTTGCTTGTGTTGTTGGTTGTTTCTCGCCTTTTGTTTTGTTGC GCACACGGCAAAGGTGTTTTTGGTTGTTGCTTGTTTTTCACGAACTGGGG CGTGATTTTTTCCAGGACCAGCACCACCCGTTATTTTTTTCTTCGAAAGT GCATTTATCGAGAGACACTTGTCGTCTTTCCGTGTGCGTTGTGTGTGTTC TTTGGTCGACGAGCCCTGACGACCCAACCCTAGCACTAACTCTTCACCAT TCCTTACGCTAACATTAAACCTTCACATTTCTATCTGTAACCCATCGTTC CACGGTGCGTTCCACGGTACGATGGGAACAGATGAGCGAAGCCCTTCTGG AGGGTGATTACGAGGACAACGTGTACGGGGCTGTATCCTTCCGTGAGGCG GACTCGAGCACGGAGACTTACGACTACACCGTGCACGTGAGGAAAACGCT GCCTGCATGCCCCATGGCCGCTGTCGTCGGTGGTGTTGCTGCTGCTGCTG CTGCTGCTGCTGCTCTTGTGTATGATGCATTTTTGTGCGTCTTTCCTGGG CGTACGTAGGCACAGCCGCACGGCTTCAAACTTGTTGCTATCGTTAATCA GCCCGTTGCTGTATAGTTGTATACTGCTGTACCCTGGAAAGTGACGGCGA CGGCGTCAAGATTGTCGGCTTTCGATGCAGCCGCCCAGCTACTACGTTTT GCGGCTGGCCTTTGCCACTCAGAGCGCCCCAAGTAAAGCCTGTGTGCCGG TTCATATTTGCTGTGGTCACCCCCCCCCCCACCCCCCTGGCGCGTGCGCG TGCCCCCTCTCTCGCCGCCGCGATCGCACGCTCAATAACAGGCCAACTAC AGCGCGCTGCACAGCGCTCCCTTGTACGTGAACCAGATCAACACGGCTCT CCTCCGCCTGGTGACGGGGAACGACGACTTGAGCATCGCCGTCACGATGC ACCCGCTCCCACGTGAGCAGGAGGAGGCGGAGGCGGAGGATTTTTTGCCC TCGTTGTTGTGTACCTCTTCCTCTGTCGATCTTCGGTTTTTTTAGCTGCG TTCTTGTTGCTAGTCGTGCGCGCGTGGATACTGTTAGGGCCCCTCTGTGG CACCTTTCGACCCCATCTAGCAAGCGGGGGCTTAAGTGGGGGAGCCAGGG TACTAAAGTACTTGGGGTTAGGAACCCTCCACCCCCCTCATCCTCATTCA CCCTCCGTAGGCTCGGACGAGTAGAAAGTGGCGAAGCGTTTGAGAGATGC CACGATACTACTGTTCGTGGACAGATGGTTTTAGGCGGTCCAGTACAGTT AAGGTGACAAAATCCACCCTCGATACATACCTGTCACGGTTATTCTTGGA CCCGTTGGAGCGAAGTTTCCGCTGCCATCACATCGAAAGAGTGGCAGGGG TTGCGTCCGCTGATGTTTCCTTTGACTCCTCTCCCGTGTAAACCCTTTTG TTTTATCCCTACTGTGGCTGTTTCCGACACAGGCACCCCACGCGAAGAGG ACATCGACTCGGGGTTCAACTCGTTCAACGTGTCCATGTTCATGCTCATC GCCTTCAGCTTCGTGCCCGCGGCGTGGATGGCCTACATCGTCCGCGAGAA GGAGACCAAGTGCAAGCACCAGCAGGTACAAGCAAAGGAGGGGCGATGCA GCGGTTGGGTGCATACTGGGAGTTTGTCGTCGCTGTAGTGTTGACATTTG AAAACCGTGCCGGTCTCTCTGCCATGTTCGTGTTTAGTTCCGGTCCAAGC GACGCGGACGCCTTCCGTGGGCGCAGGCCTGCCATGGCGAGCCCCGCGAT ACGTGATTTAGCAACGGCGTCCTCGCCATCTACGATGACGTGCAGTCACC CACGTCTGTTTGTGTTCTCTTCCAGATGCGTATCAACCCACAATTATCCC TGTTTGCTCTCTCCTAGATAGATGTACACCCCCACATCTTTCTCTGTTTG CTCTGTCGCAAAGGTGGTGTCCGGTGTGGGCCTGGAGGCCTACTGGCTGT CTTCCTTCCTTTGGGACTACGTGTCGCTCGTCCCCCCGGTGGCCTTTACG CTCATCGTGCTGGCGGCCGCGGACGTGACGGCCCTTATCTCCGGAGAAAA CGGCGTCGCCACCTTCCTGCTCTTCCTGCTCTTCGGGTTTAGTATGGTGG GCCGTAGCTAGCGCACGCTTCGGTGGTCGAGATTGATACATGCGCACACG CACTCCGCTTCACGTGTCTCCAACCATGGCGTGGCGGGGCAAGTTTGGAT AGTTGTAGATGTGGGACACATCTACACACGCGCTCGCCTGCAATCGTACG AAGTGTATCTTTTTTGCTACCGAGGGGAAGCGACGCCTTCTGTTGGGTTC GAGGACGCGTCGGAGCAGATTTGCTGCTACATTCACAACCTCCTTTTTTC TTGCCCCCTCCCTCCCTCCTTTCTTCAGTCACTGTTACATTTTCTCCGCA ACTGCCTCATCTGTCTCTCTCCCCCCGTTCCGTACATGCTCGGTTGTCGA CGAAACCAGCCGTGCTACACTTACCTGTGGAGCTTCTTGTTCACTAACTA CTCCAAGGCACAAAACGCCTTCCTGTTCCACAACTGGATCACCGGCCTCA TCCTGCCGATCGCAACCACCATCATGTCCCTGTTCGAAGGAACCGTGAGT CATCTCGTTGTTGGTGGTTGTTGTGTTGTTTTGTTGCTTTGGTTAGAGAA GTTCCTGCCCCCATCAGGAGACGGTTCCATGCGAAAGGAACAAAAAATGT TCGATTGGTTGGTGTGATACGGTATTCCGTATTGATGGCAGGCGTTTTGC TTTTTGTGATGGGTTCACTAGTCGCGCCAGTCAATCACGACCTGCTGTGG ACCCTCCCGCACGCTGTGCTGTACCAACGGCTTGGTGTCGGCCTTACGGT TGAGGCGTTAAAACGTGGCCTTGTCGGCCTGCCCCTCGCCACATGGACAG CCAATAGACTCGTCTCTCCAGCAATAAAAAAAAACTTTCCCATAAAATTA GAAATTGGCGCCCGCTCTTGTTTGCCTGCAGAATTATCCCCACCACCGCG GCATGGACTTTAGCTTCCTACACAGCGGCGACGTCTTCAGTTTGCCACTA CCACTGCGCACCTCTTTCTGGTGCCAAACGTGTTGCTGTTGTTCCAACCG CCGACTCTCTGTGTGCGTTTTTTTTTTTTCAGGTCTCGGACGTTGGCCGC GGCATAGCCGCGGTGCTGCGCATCGTCCCCAGTTTCGCCCTGGGCGACGG TCTCATGAACATGAGCTTCATGGAGGTGGGATATTTGCCTCCAAGTAGCA TCGTCTCTCGTTGGGGTTAAGGGGTCCTGCGCTGTGACGACCCCCGTTTG TTTTGTCGGCATGCACGTTTGAAACCGATTCCTGTTGTTCGTTCGGCTTC CGCACGGGAATAACGTAGCGGGCACAACCCGAGACTCATGAGAAAACGCG GCGTTGGAAAGTCGCTGAAAATCAAGGATTTGGTTCTCTCGGTGGTTCCA AACGGTTCTGTAACGTTGTTGTTGTTGTTGTTGTTGTTCTCGTCTACGTC ACGACCAGCTGGTCTTTATTTTACGCGAACGAAGGGAGAGGCCACACCAC GCCACTTGTCCACTGCCACCTCGCCTACAACGCGCAGCGGTGTACCTCCG ACATGTCATCCGTTCTGAACAACTTAACGGTCGGCAAGAAGGGTCGCTAC CGGCAGGCGGACGGTTGGGTGCCGAACACGCTGTTCGTCAAACGAGAGCG GCCGAGACCAGCATCGGCGTCTCGGGAAGCTCTTCCTCCCCGGACGCGGG CGCCGAACATACAAGATACAGTGTGTTTCGGCGCCCTCGGGGAGGAAGAG CTGCCCGAGACGCCGATGCTGGTCTCGGCCGCTCTCGTTTGACGAAGAGC GTGTTCGGCACCCAACCGTCCGCCTGCCGGTAGCAACCCTTCTTGCCGAC CGTTAAGTTGTTCGGAACGGATGACATGTCGGAGGTACACTGCTGAGTGT CGTAGGCGAGGTGGCTGTGGCGGTGTAACGCGGTGGGGCCTCTCCCTCCA TTCGCGTCAAATAATATAATCATGGATAGAATGTGCCAGCGGGTCGTGTT TGATTTTGGGTGTCGACGTATGTGTAGGATGCAAGCCTGTCGCAGCCTAC ATGCCTGCGTGGTTTTTTTCGCAGGTGGTTGGAAAAACCGGCCACGGCTT TCATGAAGAGATGAAAGAGGTGGACGAGGACATTTTTTGTTTCGGCTGTC GCGCTGCAGCATCCGGTGAAGCACGGTTGGGGGGGGCAGGCGGTTACAAT GAAGACAACACTTATCCAGCGGGCCCGCCTCGGTCGCGTCCCCTACAGGC CAGTTTGCAATTTACGCATGTCAACGTCAATCATATGCTCCCCCGCACGC CTCCATGTTATCATTTCCGCTGGTCGACAGTTTTTCGGATTCCTGGACGA TGAGGACTATACGGCCCTTTCCATGAGGATCACGGGTAACGCCCTGTTGT ACATGGCCATCTGCGGAGTGATCTTCCTCGGGCTGCTGTTGGTCACGGAG AGGTGCGCCGTACATTCTGCTGCTGCGAGCGGCATGGATCACTCGCGTGC TGTGCACCATTTGCCCGGCCGGTTGCCTTCGACGACGTCTCCCTCCCCCC CATCCGCAGGTCCCTGAGACATACTTCGTATCTTCTTCCCCTCCTCTGTG TTGTACTTCTATGTCATCATGGTCGTTTTCGGTCGGCGTTGATGTAGTAG GGTTTTTCTCAAGTCGTCCTTATCTTCTGCTCCCCCTCTGTCGTCGTCGT GGTCGCGGTCCTTCTTTGCAGGGCATCTGCTGGCGGTTCCGCTCTGTCGG GACTCTGCGGCAGGCTCTCCGTGGGCAGGAGTCTCGGCAAGCTCACCCCG AGGCAGCTCGGGGACGAGGACGAGATCGACGCGGACGTCAGGGCGGAGAT GGACAGGGTGGCCGGCGGCGGCGCTGACAACGACGTGGTCAAGGTGGGAC AGACTTGTCTTGTGTAGTTTTGATAACGACACTGTCAGTGGCAGTTTTTT CTGGTCTACTTATCTAGTAGCTGTTGCGAAAGTGTTTTCGGCAACATATT TTTCTGTATTTTGGCTGCTTTGATGTTGTTACAACAGCAGCAATCCAAAC GATCCTTCGTCTTGTGCACCAGCATGAACTATTAAGCGGTGTGTGGGTTT ATGTACTCTAGGAACATCGATCTTGATCTTATGTCGTTGAGGCCGCCGCC GCTGCCTCCGCCGCGTTTTCCCGTCTGTTTGTCTCAAAATGAGTGTTTTT TTTTTTTCTCGTTTTCCGTTTGTATTGCGAAGAAGTACGGTATTTTGCTG CGCGCGGGGCAGCCGTCGACAAAACCGTGTGAGACGATTGTGCTTTCCGC GTGCGGCGGGCCTCCATAGCGAGGTGTTCAGCGAGAAGAGCACCTCGCCG CCGCTGCTCATCGGCAACAACCATAACCGCCTTCACACACTCGTTGCACG TTACGCGTTTTTTTTTTCAACCGTCGTTTTATGTTGACCGGACCTTGTCC GGTACCTGGAAATGACAGCTTTCGTGTGTTTTTGCCATTCTCTTCTGTTG TGTGTGTCTTTCCTTTTCTTGCGACATATTTATGTTCAGGTCAAGGGCCT GCGGAAGGTGTATCCCACGAGCCGCGGCGCGAAGGTTGCCGTGAAGAGCA CGTCCCTGGGCATCCCGCGCGGGGAGTGCTTCGGCCTGCTCGGCATCAAC GGGGCGGGGAAGAGCTCGACTCTCGCGATCCTCTCAGGTTTGTCAAAATC AAGTCTTGATATTTGGGCTGTTTTTTTTTTTTAGAAGGAAGTATGCATAC AATCACAGAAGGATATGTATGTACCCGTTGAAGATGCATACCACAGGCTG TTTTTCTTTTGTCAGGATTTTGGGTCCTGTGGCGATGAGGCTCGTAAACA GCGGAAGCGGCATCCGGACGGAATGCCGTGATGTGGTGGCTGAAACGTTG TAGCCCCCCACACACCACTACCCACCCGTTCATGATCTACAACCTATTTC GTCACCTTTTTTGAAGGGGAACTGCCGCCCACGACGGGATCTGCTTATCT GAGTGGCTTTGACGTGGGCAAGAACCCCGAGGAGATCCACCGCCTGGTGG GGTATTGCCCGCAGTTCGACGCTTTGTTCGAGACACTCACGGGCAGAGAG CACCTCGCCCTCTACGCATCCATCAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6423:422..7848-

>mRNA_Ecto-sp13_S_contig6423.17185.1 ID=mRNA_Ecto-sp13_S_contig6423.17185.1|Name=mRNA_Ecto-sp13_S_contig6423.17185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1944bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6423:422..7848- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCTACGGGTTGAGCGTGACCACCCTTGAAGAGGTGTTTTTGCGCGTGGC
TAACGGCACCGCTGACGTAGCGGCTCGCAAGGAGATCGCAGGCATCTCCA
TGATGCGCCAGAGCAGCTACTCCTCGACCATGATGGACGCAGCCACCAAT
AAGATGGCCGCGGACGGCGGCGGTGGCGGCGGCAAGGAAGACTTGGGCAT
CGACCGGTCCAAGCCGCTGTTCGGCAGACACATGATGGCCCTTCTGAAAA
AGCGCCTCCTAACCTTCAAGCGCGACAAGAAGATGTGGGCGTTCGTCGTG
CTCATGCCGGCCTTCTTCGTGCTCATCGGCGTCCTGATCCTGCTCGCGGT
TGCTGCAACCAACGAACCGTCGATGTTGCTTACGCCGGAGGACTACAACG
ACGGCTCGGCGCCCTTCCCGTACGCCACCGAGTGCGCTGCCACCGCCACC
GCGACGTGCGACCCGGAAGTACTGGTGGCCGAGATGGACATCTCCGATTC
CGCCGAGCCTGTGGTTCTCGGTATTCCCGCTACCGCTGATGAGTCTGGCG
CCGTTGAACTGATGAGCGAAGCCCTTCTGGAGGGTGATTACGAGGACAAC
GTGTACGGGGCTGTATCCTTCCGTGAGGCGGACTCGAGCACGGAGACTTA
CGACTACACCGTGCACGCCAACTACAGCGCGCTGCACAGCGCTCCCTTGT
ACGTGAACCAGATCAACACGGCTCTCCTCCGCCTGGTGACGGGGAACGAC
GACTTGAGCATCGCCGTCACGATGCACCCGCTCCCACGCACCCCACGCGA
AGAGGACATCGACTCGGGGTTCAACTCGTTCAACGTGTCCATGTTCATGC
TCATCGCCTTCAGCTTCGTGCCCGCGGCGTGGATGGCCTACATCGTCCGC
GAGAAGGAGACCAAGTGCAAGCACCAGCAGGTGGTGTCCGGTGTGGGCCT
GGAGGCCTACTGGCTGTCTTCCTTCCTTTGGGACTACGTGTCGCTCGTCC
CCCCGGTGGCCTTTACGCTCATCGTGCTGGCGGCCGCGGACGTGACGGCC
CTTATCTCCGGAGAAAACGGCGTCGCCACCTTCCTGCTCTTCCTGCTCTT
CGGGTTTAGTATGCCGTGCTACACTTACCTGTGGAGCTTCTTGTTCACTA
ACTACTCCAAGGCACAAAACGCCTTCCTGTTCCACAACTGGATCACCGGC
CTCATCCTGCCGATCGCAACCACCATCATGTCCCTGTTCGAAGGAACCGT
CTCGGACGTTGGCCGCGGCATAGCCGCGGTGCTGCGCATCGTCCCCAGTT
TCGCCCTGGGCGACGGTCTCATGAACATGAGCTTCATGGAGTTTTTCGGA
TTCCTGGACGATGAGGACTATACGGCCCTTTCCATGAGGATCACGGGTAA
CGCCCTGTTGTACATGGCCATCTGCGGAGTGATCTTCCTCGGGCTGCTGT
TGGTCACGGAGAGGGCATCTGCTGGCGGTTCCGCTCTGTCGGGACTCTGC
GGCAGGCTCTCCGTGGGCAGGAGTCTCGGCAAGCTCACCCCGAGGCAGCT
CGGGGACGAGGACGAGATCGACGCGGACGTCAGGGCGGAGATGGACAGGG
TGGCCGGCGGCGGCGCTGACAACGACGTGGTCAAGGTCAAGGGCCTGCGG
AAGGTGTATCCCACGAGCCGCGGCGCGAAGGTTGCCGTGAAGAGCACGTC
CCTGGGCATCCCGCGCGGGGAGTGCTTCGGCCTGCTCGGCATCAACGGGG
CGGGGAAGAGCTCGACTCTCGCGATCCTCTCAGGGGAACTGCCGCCCACG
ACGGGATCTGCTTATCTGAGTGGCTTTGACGTGGGCAAGAACCCCGAGGA
GATCCACCGCCTGGTGGGGTATTGCCCGCAGTTCGACGCTTTGTTCGAGA
CACTCACGGGCAGAGAGCACCTCGCCCTCTACGCATCCATCAAG
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