mRNA_Ecto-sp13_S_contig641.17175.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig641.17175.1
Unique NamemRNA_Ecto-sp13_S_contig641.17175.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: D8LQ14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ14_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 4.000e-195
Identity = 314/323 (97.21%), Postives = 318/323 (98.45%), Query Frame = 1 
Query:    1 DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFANLLRKQASTLEVELALARSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLFAYGGGQR 969
            DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFA+LLR QASTLE ELAL RSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKL+AIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFM+ VVMPAFREC+QAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTS FGASFADTYVSDFLFAYGGGQR
Sbjct:   45 DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEFELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECMQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYGGGQR 367
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A6H5K0Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q7_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 3.570e-63
Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 1 
Query:    1 DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFANLLRKQASTLEVELALARSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 435
            DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFA+LLR QASTLEVELAL RSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV
Sbjct:   45 DASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 189
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: I4IE70_9CHRO (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=8 Tax=Microcystaceae TaxID=1890449 RepID=I4IE70_9CHRO)

HSP 1 Score: 109 bits (273), Expect = 3.880e-23
Identity = 59/194 (30.41%), Postives = 114/194 (58.76%), Query Frame = 1 
Query:  373 YTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPGEDYAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            Y   + RK+R +Y++  +  Q++++V Y +  +D PLLG+  +A G  ++L  LD QPLF  +DY  KY +    + +IR+KYP L ++L   YY  + +FS  +++A    K +A+  ++ +  PA++E IQ Y +++ +A      +  ++ ++  Q ++DR+ AER+    + +S FG  +++ ++  FLF
Sbjct:   58 YQCPQFRKIRYTYINAGETAQIFNSVIYPSYNYDLPLLGIDFLAFGKKKILVVLDFQPLFRDQDYLTKYIEP---MRSIRDKYPDLAQDLPMKYYDANQYFSPYLLFA----KTDAETVVKQL-FPAYQEFIQLYWQLLEKAQP-LTSAAAQEPIIAAQKDYDRYSAERDPASGLFSSYFGQEWSEKFLHQFLF 242
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A6U3U630_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U630_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.030e-20
Identity = 77/282 (27.30%), Postives = 138/282 (48.94%), Query Frame = 1 
Query:  148 LAPPELQLQSDEGFEGEPLAWTESLGSGGP---LFFANLLRKQASTLEVELALARSPVPRCMDTVC---------NPERRSRVRNLIYTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPGE-DYAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            L+PP   +  +E      + W  S+ + G    L +      Q S ++  L+  R+ VP C D            N ++++R+ N+    D  RK+RM+Y D     QV++++ Y  P ++ P+LG+  ++    + L + D QP+   E D+A   +D   KL++IR  Y  L  ++   +Y  + FFS  M++ R+    + +  +   VMPAF+  +Q + ++V           T   VL+RQA +D + AER+    +  + FG  +++ +V DFLF
Sbjct:   65 LSPPLSIMTIEEAESRHEMPWKTSIDNDGDDSSLLYMPFWEWQISFIQKNLSNVRA-VP-CSDPNIHQHDYHYNENKQKKARIVNICLQSDEYRKIRMTYYDAGSKTQVFNSLWYPRPEYNLPVLGIDLLSFNQKKYLTIVDFQPIQENEADHAC--SDYEEKLKSIRKDYKNLQGQMSPRFYDETLFFSKQMIFGRF----DTEKVVHEEVMPAFQRYVQTHYDMVLNTTPDVSSKSTSN-VLDRQAAYDSYSAERDPATKMFEAMFGVDWSEGFVHDFLF 337
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A7S2GVA5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GVA5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.730e-20
Identity = 66/208 (31.73%), Postives = 115/208 (55.29%), Query Frame = 1 
Query:  337 NPERRSRVRNLIYTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPGED-YAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIV-NQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            N ++ +R+ N+ +  D  RK+RM+Y D     QV+++V Y  P ++ P+LG+  +A    + LA+ D QP+   E+ +A  Y      L+ IR+ YP L   +   +Y  + FFS  M+++R+    E    + +   PAF+  I  +V+++ N  P     S   + VLERQA +D + AER+    +LT+ FG  ++++Y+ +FLF
Sbjct:  201 NEQKGARIVNMCFESDEYRKIRMTYYDAGQKTQVFNSVWYPHPKYNLPILGVDVLAFNQQKYLAITDYQPIHDAEEKHACTYEHL---LKPIRDDYPNLKGRMSNKFYDENQFFSKQMVFSRF----EDVNVVHDEFYPAFQRYIMTHVDLLQNTKPDENMRSM--RFVLERQASYDTYSAERDPALGLLTAMFGTDWSESYMREFLF 399
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A7S1DEG3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DEG3_CYCTE)

HSP 1 Score: 100 bits (249), Expect = 1.970e-19
Identity = 77/256 (30.08%), Postives = 125/256 (48.83%), Query Frame = 1 
Query:  208 WTESLGSGGPLFFANLLRKQASTLEVELALARSPVP-----RCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMG--SVRVLALDLQPLFPGE-DYAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            W  S+     L FA         LE  L+  R P+P       +D     + +S + NL +  D  RK+RMS+ D    +QV   + Y  P ++ P+LG+     G  +  ++A D QP+   E D+A  Y     K   IR KYP L   +   YY  +  F+D M+++R+    + + +++  V+PA +E  +A+V ++ +        P    V+ERQA FD + AER+Q   +  + FG  +A+ +V DFLF
Sbjct:   67 WNTSVSPNQRLVFAEFWNWHLDFLESNLSNLR-PLPATNRDNSIDFSLVQDEKSHMVNLCFRSDEYRKIRMSHFDGGKQIQVLQALWYPDPKYNLPVLGIEMAQFGGGTGHMMASDFQPIHDSESDHAVLYTPLIKK---IREKYPLLQGRMSDRYYDYT-HFNDFMLFSRF----DDERYIDTDVVPAVKEYTRAHVNMIQELKPDDTAIPK---VMERQAAFDTYFAERDQAIHMFKAKFGKQWAEDFVYDFLF 310
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A7S0BH48_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BH48_9RHOD)

HSP 1 Score: 67.0 bits (162), Expect = 3.030e-8
Identity = 53/203 (26.11%), Postives = 99/203 (48.77%), Query Frame = 1 
Query:  355 RVRNLIYTGDRVRKVRMSYLDTP-DMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKLEAIRNKYPQL---GEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLER-QAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            R R+  Y   ++R++R +++     +QV + V +    +  P  G   + +    ++ALD+QPLF  ++Y  ++      L+ I +KY +    G +  ++      FFS   ++ R  P E  D  ++N V  AF+E +  Y+ IV +AP      P E A +E+ Q  +  + AE++  R +    +G  + + Y+  FLF
Sbjct:  102 RTRSFGYRTPKLRQIRAAHVQGGRSLQVLNFVIFPELKYQVPFFGADLVTLPGGHLIALDMQPLFHDDEYKEEFYSG---LKPIFDKYAEQLPWGGDFPEE---AKQFFSPCFLWTR--PAE--DEKVQNEVFDAFKEYLDTYLSIVEEAPEIT--DPEELARIEKSQKAYLAYRAEKDPARGMFQRFYGPEWTEEYIHGFLF 292
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: UPI00164826DD (phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Synechococcus sp. Minos11 TaxID=221341 RepID=UPI00164826DD)

HSP 1 Score: 65.9 bits (159), Expect = 4.260e-8
Identity = 47/193 (24.35%), Postives = 91/193 (47.15%), Query Frame = 1 
Query:  376 TGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGE-DYAAKYADANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            +  ++R++R + ++      V + V      +D P  G   + + +  +LALDLQP    + D+  K     ++L  I  ++ +          +  P+FS   ++ R     E D  ++ VVMPAF++ +  Y+E+V+ A    P     +A+L  Q  +  + AE++  R +LT   G+ + + Y+   LF
Sbjct:   68 SSTKLRQIRAACVEAGSAASVLNFVINPLTTYDLPFFGADLVTLPAGHLLALDLQPALKSDRDHTEKVW---SRLLPIFERWQECLPHGGPIPEEAQPYFSPGFLWTRIPLGAEGDALIDEVVMPAFQDYLNLYLELVDSAETVEPDRS--EALLAGQRRYTTYRAEKDPARGMLTRFHGSEWTEEYIHGVLF 255
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: PEBB_PROMM (Phycoerythrobilin:ferredoxin oxidoreductase n=10 Tax=Prochlorococcus TaxID=1218 RepID=PEBB_PROMM)

HSP 1 Score: 58.2 bits (139), Expect = 1.490e-5
Identity = 42/165 (25.45%), Postives = 76/165 (46.06%), Query Frame = 1 
Query:  469 DFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAK--LEAIRNKYPQLG---EELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            D P  G   + + S  +LALDLQP    ++   K          E  R   P+ G   EE +       P+FS   ++ R     E +  ++ V+MPAF++ +  Y+++V  A   +P    +  +LE Q  +  + A+++  R +L    G  + ++Y+ + LF
Sbjct:  100 DLPFFGADLVTLPSGHLLALDLQPAITSDERHTKQVWERLMPIFEHWRVHLPEGGPIPEEAK-------PYFSPGFLWTRLPLSIEGNQLIDEVIMPAFKDYLNLYLDLVEMAEEVSPQRAFK--LLEGQKRYLSYRAKKDPARAMLARFHGHQWTESYIHNVLF 255
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BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Match: A0A7S4SWZ5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SWZ5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.470e-5
Identity = 30/106 (28.30%), Postives = 55/106 (51.89%), Query Frame = 1 
Query:  631 ELRKDYYKGSPFFSDSMMYARWGPKEEADGFMENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSNFGASFADTYVSDFLF 948
            ++   +Y  + FFS  M++ R+    + +  +   VMPAF+  +Q + ++V           T   VL+RQA +D + AER+    +  + FG  +++ +V DFLF
Sbjct:    4 QMSPRFYDETLFFSKQMIFGRF----DTEKVVHEEVMPAFQRYVQTHYDMVLNTTPDVSSKRTSN-VLDRQAAYDSYSAERDPATKMFEAMFGVDWSEGFVHDFLF 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig641.17175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LQ14_ECTSI4.000e-19597.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0Q7_9PHAE3.570e-6397.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I4IE70_9CHRO3.880e-2330.4115,16-dihydrobiliverdin:ferredoxin oxidoreductase ... [more]
A0A6U3U630_9STRA4.030e-2027.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2GVA5_9STRA6.730e-2031.73Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1DEG3_CYCTE1.970e-1930.08Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0BH48_9RHOD3.030e-826.11Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI00164826DD4.260e-824.35phycoerythrobilin:ferredoxin oxidoreductase n=1 Ta... [more]
PEBB_PROMM1.490e-525.45Phycoerythrobilin:ferredoxin oxidoreductase n=10 T... [more]
A0A7S4SWZ5_9STRA2.470e-528.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig641contigEcto-sp13_S_contig641:1345..9025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score110.5
Seed ortholog evalue1.3e-21
Seed eggNOG ortholog159749.K0SXV6
Model size2303
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Ferredoxin-dependent bilin reductase
EggNOG OGs28II3@1,2S2CU@2759,2XA81@2836
Ec32 ortholog descriptionFerredoxin-dependent bilin reductase
Ec32 orthologEc-15_001330.1
Cds size846
COG Functional cat.C
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig641.17175.1prot_Ecto-sp13_S_contig641.17175.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig641 1471..7694 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463886.9200003-UTR-Ecto-sp13_S_contig641:1344..14701681463886.9200003-UTR-Ecto-sp13_S_contig641:1344..1470Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig641 1345..1470 +
1681463887.0031145-UTR-Ecto-sp13_S_contig641:7694..90251681463887.0031145-UTR-Ecto-sp13_S_contig641:7694..9025Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig641 7695..9025 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463886.9366124-CDS-Ecto-sp13_S_contig641:1470..16261681463886.9366124-CDS-Ecto-sp13_S_contig641:1470..1626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 1471..1626 +
1681463886.9514337-CDS-Ecto-sp13_S_contig641:3165..33151681463886.9514337-CDS-Ecto-sp13_S_contig641:3165..3315Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 3166..3315 +
1681463886.965333-CDS-Ecto-sp13_S_contig641:3820..40181681463886.965333-CDS-Ecto-sp13_S_contig641:3820..4018Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 3821..4018 +
1681463886.9760613-CDS-Ecto-sp13_S_contig641:4813..49371681463886.9760613-CDS-Ecto-sp13_S_contig641:4813..4937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 4814..4937 +
1681463886.9851537-CDS-Ecto-sp13_S_contig641:5682..57851681463886.9851537-CDS-Ecto-sp13_S_contig641:5682..5785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 5683..5785 +
1681463886.9942608-CDS-Ecto-sp13_S_contig641:7579..76941681463886.9942608-CDS-Ecto-sp13_S_contig641:7579..7694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig641 7580..7694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig641.17175.1

>prot_Ecto-sp13_S_contig641.17175.1 ID=prot_Ecto-sp13_S_contig641.17175.1|Name=mRNA_Ecto-sp13_S_contig641.17175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp
MLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFANLLRKQAST
LEVELALARSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPD
MQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYA
DANAKLEAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFM
ENVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAERE
QVRPILTSNFGASFADTYVSDFLFAYGGGQR*
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mRNA from alignment at Ecto-sp13_S_contig641:1345..9025+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig641.17175.1 ID=mRNA_Ecto-sp13_S_contig641.17175.1|Name=mRNA_Ecto-sp13_S_contig641.17175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig641:1345..9025+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATGCCTCCGCTGGCGTAGGCTCGTCGTCCCGAAGCCGGGCGGCGTCGCC
GCCACCGCACCACGCGGGTTCCTCGAGGGACGGGGGGGGCAGGGGGGGGT
CGTCTGGCAGCGGCGGGGGACCCCGCATGCTGGGCGTGTCGGACGTGCTG
GCGCCCCCGGAGCTGCAGCTGCAGTCGGACGAGGGCTTCGAGGGGGAGCC
GCTGGCCTGGACGGAGTCGCTAGGCTCTGGGGGTCCGCTTTTCTTTGCGA
ACCTTCTCCGGAAGCAGGCGTCCACTCTCGAGGTGACTCCGTTGTTTTAT
TTTTCTGTGTTTTTGTTTTGGGAGTGCACACCAAGGAAGGATAGAGTGAC
CAAAAGTGAAAAGGACACCGATGATTTCGCATTCCGTTTCGGACCTTGTC
CGGACACAGGCGTCCGCTGTTGAGTTAACTTTTTTTTTCTTTTTGAGAAG
AGTGCACGAACGATAAGACGAAAACGACACCTGTATCGGAGAGGTCGAAA
TGAACATCCGTGTTTCAGTCCTTTTGAAGCAACTGAAGTGCCAGGTGTGA
CGGCATCTTCCGTCTTCGCAGGTTGTCGTGTTGCTGTGTCAATGTGTCGG
CGTTGTGCTTCAGCGGTTACGCATTTGTTGGTGTCGTCGATGGGTTGCGC
GCGGTCACGAGAAGTTGACCCCCATGTTTTGGTCGGTTCGGAGCATTCGC
TGAAGGCGCCGCAAGAGTCTCATCCACGGGTCCGGTCATCCTCCACAAGC
TTGCTACCACCGCCGGTGGCTTCGATTCCACGACGCACTACACCCGCGGC
CAGGTCTTGTTTACGGCGGTAGTGGCGACCATGATGTGGTCTCACATCGT
TTGGGCTCGGTGCTTGAGGCGTTCGCTGCTGCTGGTGCCGTATTGGAAAA
CTAGCGTCGTGTCGGGTTTGCCTGCGTTGCAGTCAGTCGCCGAATGCTCA
TGAGCGCCGACCAACAATTCCGGCTTGTGGAGATTACGGATGGTTTTGTT
GTCGTGTTGCCTGTCCCTCCCGATGCATGCATTACTACAAGTGATTCCCC
TGAGTAGGCTCATAAAAGAACAGCAGTGCCAACAAAGGCTCGCTGCCACC
TGTGACGTTTCTTAACCTGGAACAAATCACACAGCTGACGTGTATTTGAC
TCGAAGAGCCGGGCGAACCTTAACGAATCGAAAAGAATAACTTGCATATC
TGTCGAATACGACAGCCTCGGAATCTAGATGCCATCTACATCTTGCTGCC
GAGGGTTCGCGCACCAAAGGTCGTGTTGCAACTCGTCACACATGCGCTGT
ATTGATCGGCCGGGGGCTCGACTTGAAGTAGCGACCCATCTTGTCGCTCA
ACTTCTTCGAACGTCACTCTCCGCTCATCATTGGGAAATTGTTTTGCAGA
AACGTATGATACAAAGGACGCTCGCCTCTCTTCCTGTCCGCATGGGATGT
CTCCGAAATCACAACAACCAAGAAGCAGCAATTCTCGAGAATGCTGCGTT
GCATGTCTCAAGACTAACCCTTTGGAATTGCATACACCAAAACTCGAGAA
AATTTCACTTGGAATCACAATCTTCCCCAACAACATTGCGTCGGAACCAC
AAACATGTCCCACGAGTGTTATTGCCTTGAACCACAAACATTAACTCACG
GGCACTATTGTCTTGGAATCACAAAACATTTCACTCACGAGTGTCATTGC
CTTGGTACCACAAACATTAACTCAAGACTATTTATTGTCTTGTCATCTCA
AGCATTGTCAAACCTCTTTTGTCCTTTCCATTGCGTGAACCTCCTCCCTC
CTCCAATGCGGGCCGCCATAGGTCGAGCTGGCGCTCGCCCGGTCGCCAGT
GCCCCGGTGTATGGACACCGTGTGCAACCCGGAGCGCCGGTCGCGGGTGC
GGAACCTCATCTATACCGGCGACCGCGTGCGTAAGGTCCGCATGAGCTAC
CTCGACACTCCGGACATGCAGGTGGGTGGCTGTGGCTGGCGGGAAGGGTG
GCTTCGGCCGATCGCCGGGAACATGATCGAATCGAGCTGATGACTCGAGC
TTGGTTGGAATGCCTCGTTCATGATGAACGATTTGTCCCTATCACGATGC
ACGCTTCAACAGGGCCTCTCGGCCCATGAAAAGTAAAGAGTTTGTGTTGC
TGCCGTCACAGCTGCTGTTGTTTGTAAGGGAGCAGGTGTGCCTTCACCAA
CCCGCAGGGACCGCAGGGGAGGTGGTGCCACCGCTGCTATCTTGTCCCAC
ACTGCAGGGAATTTGACGGTTACGGAAGTAACTCTCCAAATATTTTCTGG
GAACGTTCTTGTGAAAAAGAGGGAATGAATCGTCCTCGGACAGACATTTG
GAAGATTGCACCCTTTAAAAAGGTTATCTCCCACTCTCTTTTTTTTTCTT
CGGGCGGTAGTTGTAATGGTCGCTAGCCTTGTAGAGAGTAGGTCCGACAA
TTTCCAACGAACAAATCTGTCCGCAGGTGTACAGCACCGTAGCGTACAGC
GCCCCAGGCCACGACTTCCCCCTGCTCGGTCTCTCCGCCATGGCGATGGG
GAGCGTGAGGGTGCTGGCGCTGGACTTGCAGCCTCTCTTTCCCGGCGAGG
ACTACGCCGCCAAGTACGCCGACGCGAACGCTAAGCTCGAGGCCATCCGG
AATAAGTACCCGCAGCTGGGAGAGGTGCGCGCCGTGTAATAGATGCTCAT
TTGCCGCTACTTTACACGCAAAAGCAGCTTTTTTGTTGGCGAAGGGAGGG
GGGGAGTTCTGTGCACGTTGCGTGCTGCGGGTATCAACTTGGTTGCATTT
TTTGTTCCCCTTATCCACTTTGACCTTTTGTGCGGTTTTGCCCAAGAAAA
TGGTTTTCATTTCCCCGTCAAAAGTGGAATTTCCCCGAGATCGGGGAAGG
TGCCCTCCCACCCGCCTAGTGGCCTCCTCAGACGAAAGCGTGTCCTGTTC
TTCCCCCAAGACACCTGAGGTCACACATTTTTTTATGTCCTCTGGAAGAA
ACAAGTAGTCAATTGATGTTGTATGGTACAGCGACACTATTATTGATAGG
AGGGCGAGGGCCCGATCATGAGCAAAAGCATTTTGACAAGAAAGCGGGGC
TTAGATTTTTTACAGCGTTAAGAAAGGAAAGGGCGTAGGAAAATTGCGGT
CAGCCGCCGGCACGACGTGCCAGACCGTTTGACGGCGTTGCACCCGGCTG
TTGTCAAATCGTTGACATTGCAAGGCTTTGCTACTGAAGTTCGTGTTTCT
TCTGAGAAAGGGCTGGCAGTTTTTACGAACCTACAGCAGGAAATTGTCAT
ACCACACGTAGCATGTAGCACACCCGACATGAGTAGTATTCTGTTTGCTT
CTTGTCCCCCAATGAAAACCAGAATACAGTTTCAGCTCACAGCAAACCGA
GCACCCACAAAAGCACCCCCTCCGTATGTATGCACCATATTCCTCTGCCT
CCGCCATGATTTACCGCAGGAGCTTCGAAAGGATTACTACAAGGGGTCGC
CCTTTTTCTCGGACAGCATGATGTACGCGAGATGGGGACCCAAGGAAGAG
GCGGACGGTTTCATGGAAAACGTCGTAATGCCCGCCTTTCGAGGTGAGTC
ACCCGTAGTTGTCTCCCCCTACAGATGAACGGTACGCATAAACTTTGTTC
CAGGGACGCCGCACCCATCCTGTCAACGCACGTCGAGTTGTGGCCCTTGG
TTGAATGTGCCGTTTGATGATGTGCCTTGAAACACCTTGTGGACTGTGTT
GAGCTATGGTCGTTTGGCTGCTATATAAGAGGGGGTCCCGATATTAGAGG
TCCGAGGGCCTTGGTCACACAACCCCCTTATATCGGAGCCACGACTTTGT
TGCCATGTCGGAGGTCTCGCTGCCACTTACCTGGCCCGTCCGCGGGCGGT
TCAAAGCTTCCGGCACCCATCGCCTCGGAGCATGTTCAGTTGTGAAGCGT
CGTTTCTTGAATCTAACATTTTTACCTGGCGCTGGAAGGCTTGAGTTTTT
CTACTTTTTGTTGTTTGGAGTGTCCTGCGTTGATAAAGAGCATCGTCTAT
AACCCTTGTTGCGTGGAGTCATTTTTTTTTCCTTGTCGAAAGAGGCACTG
GTGAAATGAGACACGGCAACCGGCTCGTTCACAAACGCTGGCGTGTATCA
TCTTGCCTTGACGGCGTGTCGTCAAACACCCCCATTTTTCTTGCCCAAGC
TGACGACAATCTCGATCGAAATCATTTTCCCATTCCATGTCGTCATTAAC
ACAACCCTTTCCCCCCCCCCCACGCTTATCACGATATCCCCTGCCTTATT
CCCATGCGAAACTTCCGCGCCCTTTGTTGCCACGGCAGAGTGCATACAAG
CGTACGTTGAAATCGTCAACCAGGCCCCCGCGCACGCGCCAGGTTCTCCC
ACCGAACAGGCGGTACTAGAGCGACAGGCAGAGTTCGACCGGTAAGAGGT
CGCCAGACGGAACACGGTGGGGCGTGGGCAGGGTAACGGAGTGACACAAC
CCGTCTGTTTGTTACTTCCTCCAACTTCAAGAATAATGAACAAGAAATGT
AAATTGTGGCGACTGTGAAAAGCGAGTTCAACTCCCACGGCCCCGCTTGG
TTTGTTTCGATGACGGTGGGAGTCTTGCGCTGTCCTGCAAACCCGCCGTG
TCTTGTCTCTAGCGTTTTTATTGTTGTTTACTCTTTTTATTACCTCCTCC
AACCGTGACGTCTATGAAAAATGAGTGCAACTCCCCCCCCCCGCTCTCCC
TGGTCTATTTCGATGACGGTGGCAATCTTGCGCTGTCCTGCAGACCCGCC
GTGTCTTTTCTCTACGCAAGCGTTTGTTGGGGTGTTTACTCTTTTTCCCG
CTCTTTGTAGACCGAAGTTAAACGATTAGACCATGTAGTCAGCGCTGACC
AGTCTTGCGGTTTTATTATTTGGTTCTATTCTAGTAAGTTTGCCGTGTTT
CTCGGTCCTGGAAACTGTCGGGACTCGTTCATGTGGTATTGACGACAGCG
CCTGATCATGTGGCCCCCCATATAATCCAAGCAGACACTGATCGCAGTAT
TTTTTACGCACACTGGGGGTCCTCGAGTACGGCGGTTGCCCTACATAAGA
CTGGTGAAAATTACTGACATTACAGGGAGTAATGAAGTTGTTCTACAAAT
TGACTAGGGCGCCTGCCTCATAAGACGTGCGTCAATTGACTCCGGCTACC
ATCGTGAAATACCATCCGCAATCGTGTAATCGACACCCCTAACATGAGGC
GCCGTAAAGCACTACCCGCTGCCCATCTCCGAACATCCAAGCACACGCAC
AAGTGCCCCCGACCGGGGCTCGCACCCCCCGACACTTGTTCTATACAGGC
GGTCATTCTCAGTACCTGCCCCACCACCACCTTATTCCGGGACCCCCGCT
GTACCCCATACCTTGTCGTCTTCTGTCTTAGTGTTGCCTTCCGTTTTAGA
TTTTGTATGTTGTGACTTTGAACGTAGACGTTGTCTCCGACGGTACACGT
CAAGTGATGCAAGACAAAAGGGAAACGGATTGGGACCCAGCACACGCCCT
GCACTAATCTTGGATGTAGTTGAAATCAGGAGGGGAGCGGGGGTATTGTC
AACACTGCAGTAATACTGGGTTGTTGACGTTGATCCGGTGACGGTTAGTT
GCCGTAAGGATGCGAGAGAACGCACTGGAGTTGTCAGCGTTTTTCAGAGC
TTGATTGCTCCACAACTAGGAGTGTGTGTGTCAACACCGACCGATACCTC
TCAGTAAAGCCCTCGCGACGACTTATCTCCAAAACCACCTTTTCGGCAGT
GGTTTAGCAGTACCCTCCTGGTTGTGGAGGAAACACTCGGTGAAAAACAC
GAACACCCCCGTGCATTCTCTGGCATCCTTGCGGTAGTTGTCGTCCCCTA
TCAAGGGGTGAGAGAGGTGGAGGGCTGAGTTTTCATGCCTACCGGAACCC
CTTATGCCATATCTTACCAAGGATTATGGCAGAGCGGCAGGGGAGGGCCA
GACATACTCGGTTGCAATCTGTGCGCCCTTCAGAAGCCGAAATCGAACGT
GTATCTAATGGATTGATGTCGGCTTCTAAGAAAGTCGGCTGCCTATTTAG
TTTCATGGTTTGATTTCGGATTCTGAAGCCCTCCTCGTGCAAATATGCAG
GAGCGCACGTCGGGAAAAGGGGTGTTGTGGTCAACAGTCACTTGACACAA
TCTAACTTCAACCAACGTGCCTCTCTCACTCGCAGATTTCACGCCGAACG
CGAACAAGTGCGACCGATCTTGACGTCCAACTTTGGCGCCTCGTTCGCGG
ACACTTACGTTTCGGACTTCCTCTTCGCGTACGGTGGCGGTCAACGGTAA
CGGCTCTTCCGGAAAAGAGGCGTTGGGAAAAAGAGCCGTTGTGGAGAGCA
CGTTGGAAGAAGACGATTTGGGGGCGGACACATTTTTGTAACGCCATCAT
GAGACCAACGGGTTGTGTGGCGTGTGTGCGTGTTTTGTCCTCCGGTCTAT
GGATTGTGCTGCATGAGAGCACCCAGCGTGTTTGTTGGAACCGTCCCCGT
CGCACATGTGGTGCTGTTGCTCTTCAACGCTGGTGAAGATGTTATTTACG
CTGTACACATCGGCTGTTCCCAGCGCGATATTGGTTGTGACAGCGACTCC
CGGCCGCTTTTGGCCGGTTTGTCGTGGCGGCTGATCTCGGTCACCCGCCA
CTTTTTCACCTGAAATGGCGCGACCGTGTTCGCAATAAAGTTGTCTTTGG
CCCACGACGCGCTTGTTTTAACCCCCATCTCTTGACCGCGCATCACAGCA
GCAGTTTGTGGTGGGCGGAGGTTCTAGAAGTAGTTTATGTGACATAGCTG
CTTAGTACGGCGAGAGGACTGCGGCATTCGTGGGGTTATATGCCGGGCGA
TGTGAGACTAATGTTGTCTAGGAGAGACTTGAGTATTGTAGTAGCAAGGA
GCTTGTTGGGGTTGTTACTGCTTTTGTTGTTTTCGTGACTACACGAGCTG
TTCGGGTTTCCCGGCGGTCGGTACGAGCTGTTCAGGGTTGGCTTGTGGGT
AACGTCGACATATCTTTCCGACAGCCAGTCAACCACACCTCATTCAAAGA
CCGATATGAGACTACCTTCAACATCCACGAAAAGCCTACCACGTGCCAAG
AGCGTAGGATCTGCTGCTTCTGGACCGTTGTTGTTGCTGCGTACGGGGGG
GGCATGGCATGTAACAACGTCATCTGTTGTTGCGAACAGTATGCGACCGT
TCTAATGAACCAGTTGCTTTTGACGCCACCTCTTGACCGCGTCACAACAG
CAGTTTGTGATGGGTGAAGGTTCTAGAAGCAATAGATGTGCATAGCTGCA
TACCTAGTACTGGGGGCAGGACTGGTATCCGTGGGGTCGGTATGCCGGGC
GATGTGAAACTAATTTTGTCAAGGGGAGACTGTATTGTAGCAAGAACGGA
GCTTTGATGTCGTTGCTTCTTTTTTGTGTTGACAACACCAGCTTTTTTGG
GATTCCCGGCGGTCGGTACGAGCTGTTTGGGTTGGTCCTTGCTAGTAACG
TGGACATATCTTTCCGACAGCCACCCAACCACACCTTTTTCGAGAACCGA
TTCGAGACTGTCGCGAACATCCACAAAAGCCTACCATGTGCGAGAGCGTG
GATCTGCTTCCTCTGGACCGTTATTGCGCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig641:1345..9025+

>mRNA_Ecto-sp13_S_contig641.17175.1 ID=mRNA_Ecto-sp13_S_contig641.17175.1|Name=mRNA_Ecto-sp13_S_contig641.17175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp13_S_contig641:1345..9025+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGGCGTGTCGGACGTGCTGGCGCCCCCGGAGCTGCAGCTGCAGTC
GGACGAGGGCTTCGAGGGGGAGCCGCTGGCCTGGACGGAGTCGCTAGGCT
CTGGGGGTCCGCTTTTCTTTGCGAACCTTCTCCGGAAGCAGGCGTCCACT
CTCGAGGTCGAGCTGGCGCTCGCCCGGTCGCCAGTGCCCCGGTGTATGGA
CACCGTGTGCAACCCGGAGCGCCGGTCGCGGGTGCGGAACCTCATCTATA
CCGGCGACCGCGTGCGTAAGGTCCGCATGAGCTACCTCGACACTCCGGAC
ATGCAGGTGTACAGCACCGTAGCGTACAGCGCCCCAGGCCACGACTTCCC
CCTGCTCGGTCTCTCCGCCATGGCGATGGGGAGCGTGAGGGTGCTGGCGC
TGGACTTGCAGCCTCTCTTTCCCGGCGAGGACTACGCCGCCAAGTACGCC
GACGCGAACGCTAAGCTCGAGGCCATCCGGAATAAGTACCCGCAGCTGGG
AGAGGAGCTTCGAAAGGATTACTACAAGGGGTCGCCCTTTTTCTCGGACA
GCATGATGTACGCGAGATGGGGACCCAAGGAAGAGGCGGACGGTTTCATG
GAAAACGTCGTAATGCCCGCCTTTCGAGAGTGCATACAAGCGTACGTTGA
AATCGTCAACCAGGCCCCCGCGCACGCGCCAGGTTCTCCCACCGAACAGG
CGGTACTAGAGCGACAGGCAGAGTTCGACCGATTTCACGCCGAACGCGAA
CAAGTGCGACCGATCTTGACGTCCAACTTTGGCGCCTCGTTCGCGGACAC
TTACGTTTCGGACTTCCTCTTCGCGTACGGTGGCGGTCAACGGTAA
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