mRNA_Ecto-sp13_S_contig638.17139.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 647 bits (1668), Expect = 3.030e-225 Identity = 323/344 (93.90%), Postives = 334/344 (97.09%), Query Frame = 1
Query: 1 MRVVASSLVLLLAGVQSLHVSVPPRVRRGSPSSPLLLRCRPISNHQHLSSNTRVLASPSDTMMSKEDLEKTTNSAPNDSAPILETKDSAPPKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPPEQEESTN 1032
MRVVAS+ VLLLAGVQSLHVS+PPR RRG+PSSPLLLRCR ISNHQHLS NTRVLAS SDTMMS EDLE+TT+SAPNDS PILETK S PPKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWT+GEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELA+IERQRVVRSA+AGLLLHGPLSHVWYNVCEGLFDIVGWN+YWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAH+VTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSP EQEEST+
Sbjct: 1 MRVVASAFVLLLAGVQSLHVSIPPRARRGAPSSPLLLRCRLISNHQHLSRNTRVLASSSDTMMSTEDLEETTDSAPNDSTPILETKASTPPKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQEESTS 344
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 315 bits (806), Expect = 1.350e-96 Identity = 139/242 (57.44%), Postives = 181/242 (74.79%), Query Frame = 1
Query: 280 YTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNS-EVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQAR 1002
Y P +LWW K+ EE++++N N+GFL V + T+AV ++ + SRGWT E +LR+P DNW GY +MLR PV VKA TSG VYALGD AQ+ GT LA+++R RV RSA AG + HGPLSH WY VCE LF +GWN WWV PKI+TDQL+WGP WNA Y+ +G++ +D+ A +WEA+TST +PLV++G++LWP H+VTYGL+P ENRLLWVD VEI+WVTILS QAA++A+
Sbjct: 41 YKPKLLWWCKSEMEEDREVNFLVNSGFLIAV-IVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAK 281
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.410e-72 Identity = 114/219 (52.05%), Postives = 154/219 (70.32%), Query Frame = 1
Query: 334 LNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 990
+N N G + VAL +A V V+ ++ RGWT E + R+ LDNW YSE+L +P+Q KA TS VYA+GD++AQ EG + +++R R +RS +AGL+ HGPLSHVWY+V E LF + WN+ WW PK++ DQL WGP WN +YI LG++ +S +W I T +PL+++G++LWPLAH VTYGL+P ENRLLWVD VEI WVTIL+SQA+
Sbjct: 106 INETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 246 bits (629), Expect = 3.070e-72 Identity = 110/215 (51.16%), Postives = 146/215 (67.91%), Query Frame = 1
Query: 349 NAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAAE 993
N GF+ GV + + +++ +SRGWT E R+P+D W GYS++L SPV KA TS VY +GD +AQ +G + D++R R+VRS +AGL+ HGPLSH WYNVC+ FD V WW PK++ DQ WGP WN YI LG++ + IW + T +PL+++G++LWPLAH VTYGLVP ENRLLWVDAVEI+WVTIL++ AAE
Sbjct: 3 NTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.030e-70 Identity = 124/257 (48.25%), Postives = 160/257 (62.26%), Query Frame = 1
Query: 223 APNDSAPILETKDSAP-PKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 990
AP S L D+A P+ + + + ++++LN N G ++ VA +A V V+ +V RGWT E R+PLDNWDGY +L PV VKA TSG VY LGD VAQ EG L +I+R RV RS IAG + HGPLSH WY V E F +GW WW PKI DQL+W P WN YI LG + +++ I + ST+ L+ +G++LWPLAH+VTYG++P ENRLLWVD VEI+WVTILS +AA
Sbjct: 85 APVTSLETLSEHDAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.050e-68 Identity = 110/222 (49.55%), Postives = 148/222 (66.67%), Query Frame = 1
Query: 328 KKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFD-IVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 990
K +N F N + V + ++ V V++ ++RGWT E R+P+DNW YS +L +P+ KA TS VY +GD++AQ EG + D++R R++RS +AGL+ HGPLSH WY+ E FD ++ W + WW PK+I DQ WGP WN YI LG + D IW I T +PLV++G++LWPLAH VTYGLVP ENRLLWVD VEIVWVTIL++QA+
Sbjct: 96 KDINSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.300e-68 Identity = 117/234 (50.00%), Postives = 155/234 (66.24%), Query Frame = 1
Query: 337 NLFANAGFLAGVALFTIAV-VFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFD-IVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAA---EQARSPPEQEE 1023
N N A +AL T+ V VN + RGW+ E RVPLDNW+ Y+ +L +P+Q K+ TS VYA+GD +AQ EGTE+ +++R R+ RS AGL+ HGPLSH WY + E F+ ++ W D WW PK++ DQ LWGP WN YI LGV+ + +W I T +PLV++G++LWPLAH +TYGLVP ENRLLWVD VEIVWVTIL++QAA E +P +QE+
Sbjct: 104 NTIINTSIFA-IALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTD-WWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPEKQEQ 335
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.090e-66 Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 328 KKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 990
K +N F N + V + V V++ ++RGWT E R+P+DNW GYS L SP+ KA TS VY +GD++AQ EG + +++R R++RS +AGL+ HGP+SH WY E FD V WW PK+ DQ WGP WN YI LG++ DS IW + T +PL+++G++LWPLAH VTYGL+P ENRLLWVD VEI+WVTIL++QA+
Sbjct: 95 KDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A8J5X504_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X504_DIALT) HSP 1 Score: 232 bits (591), Expect = 2.110e-65 Identity = 116/229 (50.66%), Postives = 154/229 (67.25%), Query Frame = 1
Query: 322 ENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSS--QAAEQAR 1002
+ + LN N LA V L + + V++E+SRGWT E + R+P DNW Y+ L SPV KA TSG VYALGD++AQS EG LAD++R R VRS++ G LHGPLSH+WY E LFD++ W +++VP KI+TDQL WG WNA+YIA +G+ + + I I T PL+ G++LW AH++TYG+VP ENRLLWVD VEI+WV ILS+ A++QAR
Sbjct: 99 DTRTLNAALNFAGLAVVVLAVVVKLLTVDAEISRGWTWFEIVSRLPSDNWSDYTSFLTASPVLTKAITSGTVYALGDILAQSTEGKGLADLDRVRTVRSSLCGFTLHGPLSHLWYIFAERLFDLLHWGAWYFVPL-KILTDQLTWGALWNALYIAAIGLTSGRALPTIQGEIKETVFPLIRDGLKLWCPAHMITYGVVPIENRLLWVDLVEILWVVILSTTASASKQAR 326
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.230e-65 Identity = 107/220 (48.64%), Postives = 144/220 (65.45%), Query Frame = 1
Query: 337 NLFANAGFLAGVALFTIAVVFGVNSEVSRGWTVGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELADIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLF-DIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHIVTYGLVPKENRLLWVDAVEIVWVTILSSQAAE 993
N + N G +A V + ++ + V+ + RGWT E +R+P+DNW Y +L +P+ KA TS VY +GD++AQ EG D++R RV+RS +AG + HGPLSHVWY+ E +F + W + WW PK+ DQ+ WGP WN YI LG++ IW I T +PL+++G++LWPLAH VTYGLVP ENRLLWVD VEIVWVTIL+S AAE
Sbjct: 88 NAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE 306 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig638.17139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig638.17139.1 >prot_Ecto-sp13_S_contig638.17139.1 ID=prot_Ecto-sp13_S_contig638.17139.1|Name=mRNA_Ecto-sp13_S_contig638.17139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp MRVVASSLVLLLAGVQSLHVSVPPRVRRGSPSSPLLLRCRPISNHQHLSSback to top mRNA from alignment at Ecto-sp13_S_contig638:5808..15207- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig638.17139.1 ID=mRNA_Ecto-sp13_S_contig638.17139.1|Name=mRNA_Ecto-sp13_S_contig638.17139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9400bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:5808..15207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig638:5808..15207- >mRNA_Ecto-sp13_S_contig638.17139.1 ID=mRNA_Ecto-sp13_S_contig638.17139.1|Name=mRNA_Ecto-sp13_S_contig638.17139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:5808..15207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |