mRNA_Ecto-sp13_S_contig6379.17137.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6379.17137.1
Unique NamemRNA_Ecto-sp13_S_contig6379.17137.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI)

HSP 1 Score: 818 bits (2113), Expect = 4.900e-289
Identity = 460/532 (86.47%), Postives = 468/532 (87.97%), Query Frame = 1
Query:    1 QISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALSTFLKAVRDAARQSRSFGSQPATGRGETSSPASTTAGRSQDEVLGVAAGAEEHEKYLDGG--GGNGDFDWQYLQGALVLLGAAGRCQRCFAGVEEEFASALLRDRIGLFASSAPRLSSLALPANSPLPNTHGGRGAGTVPENGASPFPATGGVAAADGSSSSSSEEGRVAVLRSLLARVRLDEDRTARAETRASLMALVEPSAAVPGDVLPAPAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQDLHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPPVLEHVSLLASLSRDEAATHLAQETVAGYGAAGIVLTKVERRLAEARGITH 1590
            +ISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALS FLKAVRDAARQSRSFG+QPATGR               DEVLGVAAG EE E YLDGG  GGNGDFDWQYLQGALVLLGAAGRCQRCFAGVEEEFASALLRDRIGLFASSAPRLSSLA+PANSPLPNT+GGRGAGTVPENGA+                   EEGRVAVLRSLLARVRLDEDRTARAETRASLMALVEPSAAVPGDVLPAPAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEE G      WG D+GDGADEYDTVPQ YMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQDLHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSA++DNAEG     XXXXXXXXXX    GEAAKFCTAWLLCVGSATVGCLL KVLSLPQLSERGTKHLEADLKYLSNV HALDLPAP VLEHVSLLA LSRDEAATHL QETVAGYGAAGIVLTKVERRLAEARGI H
Sbjct:  430 EISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALSAFLKAVRDAARQSRSFGNQPATGR---------------DEVLGVAAGVEEQENYLDGGLGGGNGDFDWQYLQGALVLLGAAGRCQRCFAGVEEEFASALLRDRIGLFASSAPRLSSLAMPANSPLPNTNGGRGAGTVPENGAAXXXXX--XXXXXXXXXXXXEEGRVAVLRSLLARVRLDEDRTARAETRASLMALVEPSAAVPGDVLPAPAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEHGXXXXXXWGTDMGDGADEYDTVPQVYMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQDLHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAYSDNAEGGNNDEXXXXXXXXXX----GEAAKFCTAWLLCVGSATVGCLLAKVLSLPQLSERGTKHLEADLKYLSNVLHALDLPAPSVLEHVSLLAGLSRDEAATHLVQETVAGYGAAGIVLTKVERRLAEARGIAH 940          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S4ATT1_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATT1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.640e-23
Identity = 93/292 (31.85%), Postives = 139/292 (47.60%), Query Frame = 1
Query:  736 DVLPAPARE-VRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQD-LHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNA---EGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHL-AQETVAGYGAAGIVLTKVERRLAEARGIT 1587
            DVL + A E V+ LA    S VFDVC       L+ +  + +W+E           A   D  D Y T+PQ Y+TQVGEH+LSL+Q  EPFA+  A    V    D +  +    W +   A     SD  +   ++G   S     + +  +++A   EG                     +A FC AWL  +G    G LL +++ +PQL+ +G  HL +DL YL NVF AL +   P  ++ H++ LASLS  +    + +++T +   +A   L  VE R+A  RGI+
Sbjct:  685 DVLYSDAEEAVKRLANSCHSFVFDVCSAVPKRHLNEISQMTAWRES----------ASSSDNLDSYGTLPQQYITQVGEHMLSLVQAFEPFASDPATLSLVNEVMDEVRDVALQPWSEFTGAAGYVGSDATISSLMNGKDISDLVLTNAALSDEDAALEEGATEEEI--------------ASAAFCNAWLDVIGLGVTGRLLERIMRIPQLTTKGCDHLNSDLNYLVNVFSALGVAGHPHPLVSHMATLASLSDSDLEEQIKSRDTRSEVESA---LRAVEARIALRRGIS 949          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A6U3QI04_9STRA (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QI04_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.400e-21
Identity = 89/296 (30.07%), Postives = 125/296 (42.23%), Query Frame = 1
Query:  745 PAPAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANS-DAFQDAVEPTQDLHLLTEAAWRD----------CGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHLAQETVAGYGAAGIVLTKVERRLAEARGITHS 1593
            P+ A     LA +    VFD+C       L  + +L  W EE           + GD  + Y  +PQ Y+TQVGEH+L+L+Q LEPFA+S DA   A E    +H +    WR+           G+   + E D++L               H     +  E                       A FC  WL  VGSA  G LL + + +  LS+RG +HL AD  YL NVF AL L   P  +L+H   L  + RD+   ++        G  G++    E R+A  RG+  S
Sbjct:  745 PSSAEGASRLAGNCHEFVFDICSAVPRRSLRAMSSLPVWGEE----------GESGDAIESYGILPQQYITQVGEHVLALVQALEPFASSADALSLANEVMSGVHAVAIQPWREFLVAAMANSGSGIGDSIREEDVVLELMKGQGLGDYLLSDHDGGFEEEDE------------DHEEDADDSVGAAFCNEWLDVVGSAVTGRLLERTMRISHLSQRGCEHLAADYNYLMNVFSALGLSGHPHPLLKHFGSLVVMDRDDLKANIMSRRTKD-GTVGVIRA-AEVRMAHMRGVDIS 1016          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A448YUI0_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUI0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.180e-21
Identity = 88/299 (29.43%), Postives = 128/299 (42.81%), Query Frame = 1
Query:  736 DVLPAPARE-VRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQD------LHLLTEAA------WRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHLAQETVAGYGAAGIVLTKVERRLAEARGIT 1587
            DVL + A E V+ LA+   S VFDVC       L+ +  + +W E               D  D Y T+PQ Y+TQVGEH+LSL+Q  EPFA+  A    V    D      L   +E A        D  ++  +   D++ L   + A    +      A  D                         +A FC  WL  +G    G LL +++ +PQL+ +G  HL +DL YL NVF AL +   P  ++ H + +A LS D+    +    +       I L  +E R+A  RGI+
Sbjct:  672 DVLYSAAEEAVKRLASSCHSFVFDVCSAVPNKHLNALSEMTAWXESDS----------ASDNFDSYGTLPQQYITQVGEHMLSLVQAFEPFASDPATLSLVNEVMDNARDVALQSWSEFAASAGYVGSDSAVSSLMNGKDILGLVLANAALTEEDAALEEGATEDEI----------------------RSAAFCNVWLDAIGLGVTGRLLERIMRIPQLTPKGCDHLNSDLNYLVNVFSALGVAGHPHPLVTHTAAVAMLSDDDLNAQIRSRNMDSE--VEIALRALEARIALRRGIS 936          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S1D8L7_CYCTE (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8L7_CYCTE)

HSP 1 Score: 98.2 bits (243), Expect = 2.850e-18
Identity = 81/279 (29.03%), Postives = 128/279 (45.88%), Query Frame = 1
Query:  772 LAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANS-DAFQDAVEPTQDLHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAH-NDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHLAQETVAGYGAAGIV-LTKVERRLAEARGITHS 1593
            LA    + VFDVC       L+ +  +  W +E+ GG             D Y T+PQ Y+T VGEH+L+L+Q LEPFA+  ++   A E    +  ++   WRD   A++  ES     ++L   K   E  + +     D  EG                     +A FC  WL  VG A  G LL +++ + + + +G  HL ADL YLSNV  AL +   P  ++ HV+ +  +   E  T ++    +    + +V L  +E R+A  RG+ ++
Sbjct:  190 LARSCHAFVFDVCSAVPRKHLENMSFMSCWTKEETGGFS----------MDSYGTLPQQYITLVGEHMLALVQALEPFASDPESLALANEVMGGVRSVSIQPWRDLVSAINAPES---AADSLVNGKELLEYIESQFEDVADEEEGGEDEQLDEAEK---------ASAAFCNQWLDVVGLAMTGRLLERIVRITRFTTKGCDHLAADLNYLSNVLMALGVSGHPHPLVHHVANVVIMDASELRTQISSRKSSHRNTSLVVALRLLEERIASLRGVAYN 446          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S3QF96_9STRA (Conserved oligomeric Golgi complex subunit 7 n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QF96_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 5.510e-18
Identity = 98/273 (35.90%), Postives = 143/273 (52.38%), Query Frame = 1
Query:  787 RSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANS-DAFQDAVEPTQDLHLLTEAAWRDCGLAL---DLGESDLMLLETLS-GAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHLAQETVAGYGAAGIVLTKVERRLAEARGI 1584
            +S VFD+C       +D +P+L  W +E+       W +     AD Y T+PQ+Y+TQVGEH+L+L+Q LEPFA+  D+   A    + +  + + +WRD   A+   DL E++   + TL  G +       H   HN   EG   XXXXXXXXXXXXXXXX         WL  V S+  G LL + + + +LS +G +HL  D  Y+ NV  AL +   P  +L HV+ L+S+  +     + +     +G     L K E R+A+ RGI
Sbjct:  800 QSFVFDICAHIPFKNIDLMPSLPIWGQEE-----SMWSSTA---ADSYGTLPQSYITQVGEHMLALVQALEPFASDEDSLHLANLVMEGVDHVADRSWRDFANAIHYIDLDENEF--ISTLKKGNRLKDLVLGH--VHNSFEEGDDYXXXXXXXXXXXXXXXXXXXXX----WLDAVCSSVTGKLLERTMRIQKLSRKGCEHLTVDYNYIVNVLSALGVSGHPHPLLSHVAELSSMDSESLQARIVESADDEFG-----LLKTEVRIAQMRGI 1051          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: B7FT53_PHATC (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FT53_PHATC)

HSP 1 Score: 97.8 bits (242), Expect = 1.150e-17
Identity = 88/275 (32.00%), Postives = 128/275 (46.55%), Query Frame = 1
Query:  682 ETRASLMALVEPSAAVPGDVLPAPARE--VRALAADARSLVFDVCFKPVTARLDTVPTLVSWQE--EQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFAN-SDAFQDAVEPTQDLHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDE 1485
            ET A+L+ L   + + P  V   P  E   R LA    + VFDVC       L  + +L SW+E  EQ          D+    + Y  +PQ+Y+T VGEH+L+L+Q LEPFA+ S+A   A E    +H +    WR+   A     S+ ++   ++G           SA     EG                    EA KFC  WL  V +A  G LL +++ +P L+ +G +HL  DL YL NVF AL +   P  +L H++ LA +  D+
Sbjct:  622 ETNAALVILQRLAESGPTSVPLYPETEDATRRLATSCHTFVFDVCAAVPRLHLKGMSSLQSWKEANEQ----------DI----NSYGILPQSYITHVGEHMLALVQALEPFASDSEALGLANEVMGGVHGVAMQPWREFLSASGTMGSEDVIKSLMNGKNLDNFVVA--SAALGEEEGTEEEES--------------EANKFCNVWLDVVSTAVTGRLLERIMRIPSLTPKGCEHLNTDLNYLVNVFSALGVRGHPHPLLGHLAELALVEADK 866          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S4MR14_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MR14_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.740e-17
Identity = 79/242 (32.64%), Postives = 113/242 (46.69%), Query Frame = 1
Query:  772 LAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFAN-SDAFQDAVEPTQDLHLLTEAAWRDCGLALDL--GESDLMLLETLSGAKASTEPPKHRSAH--NDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLS 1476
            LA      VFDVC       L    +L  W+EE GG  GE          D Y  +PQ Y+TQVGEH+L+L+Q LEPFA+ S+A   A E       +   +W++   +     G+ ++++L  +SG        K  + H    + +G                      A FC  WL  VGSA  G LL +++ +  LS+RG +HL  DL YL NVF AL +   P  +L H + +A +S
Sbjct:  638 LARSCHVFVFDVCSAVPCRSLRDTSSLPVWREE-GGATGE----------DSYGILPQQYITQVGEHMLALVQALEPFASDSEALARASEAMDGAKDVAVQSWKEFASSTGGADGDDNVIVLALMSG--------KDLAGHLLGQSEQGFEEDEEDLNEEEDEADK---AIAAFCNEWLDVVGSAITGRLLERIMRIHHLSQRGCEHLTVDLNYLVNVFSALGVTGHPHPLLGHFAEIARMS 857          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S0GA62_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GA62_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.490e-16
Identity = 95/293 (32.42%), Postives = 141/293 (48.12%), Query Frame = 1
Query:  736 DVLPAPAREVRALAADARSLVFDVCFKPVTARLD--TVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANS-DAFQDAVEPTQDLHLLTEAAWRDCGLALDLG---ESDLMLLETLSGAKASTEPPKHRSAHNDNAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLP--APPVLEHVSLLASLSRDEAATHLAQETVAGYG-AAGIVLTKVERRLAEARGIT 1587
            ++ P    E++ L    ++ VFDVC       L    +  L  W+ E                 D Y  +PQ Y+TQVGEH+L+L+Q LEPF +S +A   A E  +D+  +    W+D  ++  +G    S + L E +S    S         H+          XXXXXXXXXX    GEA  FC  WL  VGSA  G LL +++ + +L +RG +HL ADL Y+ NV  AL L     P+L+ +  LA + + E    + + +   YG   G ++   E R+A  RG++
Sbjct:  190 ELFPHTREELKKLITTCQTFVFDVCSSVPNHWLSPSNMSELKIWRAED-----NEXXXXXXXXXDSYSVLPQVYITQVGEHILALVQALEPFTSSPEALMLANEVMEDVKDVAIQPWKDFVVSTGVGGNVTSPIALEEVVSSLINSGSGEVAEWFHDXXXX------XXXXXXXXXXGEDDGEAT-FCNEWLGVVGSAVTGRLLERIMRIQKLGKRGGEHLNADLNYILNVLTALGLSDHPHPLLQRIGELAIMDKLEL-RDVIRASGGNYGDGLGAIIRGAEVRIATLRGVS 469          
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Match: A0A7S3L6L6_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6L6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.990e-16
Identity = 82/275 (29.82%), Postives = 127/275 (46.18%), Query Frame = 1
Query:  796 VFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWGADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANSDAFQDA-VEPTQ-DLHLLTEAAWRDC----GLALDLGESDLMLLETLSGAKASTEPPKHRSAHND-NAEGXXXXXXXXXXXXXXXXXXXGEAAKFCTAWLLCVGSATVGCLLTKVLSLPQLSERGTKHLEADLKYLSNVFHALDLPAPP--VLEHVSLLASLSRDEAATHLAQETVAGYGAAGIV---LTKVERRLAEARGI 1584
            +F+VCF      L  +  L +W++           +   D    Y T+PQ+Y+TQVGEH+LSL+Q LEPFA       A V+P   +L  + +  W++     G+ LD    D  +L+ L G K   +     +   +   EG                        FC AWL  VG A  G L+ ++L +P L+ +G +HL+ADL YL NV  AL +   P  +L H++ L+ L  D     +  E + G+     +   L  +E+RLA  +G+
Sbjct:  660 IFNVCFSIPRLHLAPLSGLDAWKKA----------SSSTDALSSYGTLPQSYITQVGEHVLSLVQALEPFATESPQSLALVQPIMVNLRHVAKQPWKELLSASGVMLDSATED-KVLDRLMGGKDLIDMVVGPAFEEEVEPEGDDDEENK-------------AITAFCNAWLDVVGLAVTGRLMERLLRIPNLTPKGCEHLQADLNYLVNVLMALGVQGHPHPLLGHMAELSMLDGD-----ILLERIQGHDTREPLENCLASMEKRLAAMKGV 905          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6379.17137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUF5_ECTSI4.900e-28986.47Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
A0A7S4ATT1_9STRA7.640e-2331.85Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A6U3QI04_9STRA1.400e-2130.07Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
A0A448YUI0_9STRA4.180e-2129.43Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7S1D8L7_CYCTE2.850e-1829.03Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7S3QF96_9STRA5.510e-1835.90Conserved oligomeric Golgi complex subunit 7 n=4 T... [more]
B7FT53_PHATC1.150e-1732.00Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7S4MR14_9STRA2.740e-1732.64Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7S0GA62_9STRA1.490e-1632.42Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7S3L6L6_9STRA1.990e-1629.82Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6379contigEcto-sp13_S_contig6379:343..7460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score824.7
Seed ortholog evalue2.5e-236
Seed eggNOG ortholog2880.D7FUF5
Preferred nameCOG7
Model size1596
KEGG koko:K10878,ko:K17586,ko:K20294
KEGG Pathwayko04113,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000280,GO:0000910,GO:0000916,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005794,GO:0005802,GO:0006464,GO:0006486,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0006996,GO:0007010,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007276,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017119,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0030029,GO:0030036,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031647,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032588,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034067,GO:0034613,GO:0034645,GO:0036063,GO:0036211,GO:0036213,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044837,GO:0045184,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048609,GO:0050821,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0061640,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0098588,GO:0098791,GO:0099023,GO:0140013,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903046
Exons9
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
EggNOG OGsKOG4182@1,KOG4182@2759
Cds size1596
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03400,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6379.17137.1prot_Ecto-sp13_S_contig6379.17137.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6379 343..7460 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463883.0097797-CDS-Ecto-sp13_S_contig6379:342..4771681463883.0097797-CDS-Ecto-sp13_S_contig6379:342..477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 343..477 +
1681463883.0228386-CDS-Ecto-sp13_S_contig6379:1022..11281681463883.0228386-CDS-Ecto-sp13_S_contig6379:1022..1128Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 1023..1128 +
1681463883.0329106-CDS-Ecto-sp13_S_contig6379:1791..19491681463883.0329106-CDS-Ecto-sp13_S_contig6379:1791..1949Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 1792..1949 +
1681463883.0429828-CDS-Ecto-sp13_S_contig6379:2861..31941681463883.0429828-CDS-Ecto-sp13_S_contig6379:2861..3194Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 2862..3194 +
1681463883.0539079-CDS-Ecto-sp13_S_contig6379:3632..38601681463883.0539079-CDS-Ecto-sp13_S_contig6379:3632..3860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 3633..3860 +
1681463883.0677338-CDS-Ecto-sp13_S_contig6379:4254..43731681463883.0677338-CDS-Ecto-sp13_S_contig6379:4254..4373Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 4255..4373 +
1681463883.0788195-CDS-Ecto-sp13_S_contig6379:5127..53831681463883.0788195-CDS-Ecto-sp13_S_contig6379:5127..5383Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 5128..5383 +
1681463883.088943-CDS-Ecto-sp13_S_contig6379:5926..61101681463883.088943-CDS-Ecto-sp13_S_contig6379:5926..6110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 5927..6110 +
1681463883.10164-CDS-Ecto-sp13_S_contig6379:7383..74601681463883.10164-CDS-Ecto-sp13_S_contig6379:7383..7460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6379 7384..7460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6379.17137.1

>prot_Ecto-sp13_S_contig6379.17137.1 ID=prot_Ecto-sp13_S_contig6379.17137.1|Name=mRNA_Ecto-sp13_S_contig6379.17137.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=532bp
QISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALSTFLKAVRDA
ARQSRSFGSQPATGRGETSSPASTTAGRSQDEVLGVAAGAEEHEKYLDGG
GGNGDFDWQYLQGALVLLGAAGRCQRCFAGVEEEFASALLRDRIGLFASS
APRLSSLALPANSPLPNTHGGRGAGTVPENGASPFPATGGVAAADGSSSS
SSEEGRVAVLRSLLARVRLDEDRTARAETRASLMALVEPSAAVPGDVLPA
PAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEEQGGGGGEGWG
ADVGDGADEYDTVPQAYMTQVGEHLLSLLQNLEPFANSDAFQDAVEPTQD
LHLLTEAAWRDCGLALDLGESDLMLLETLSGAKASTEPPKHRSAHNDNAE
GGNNDEDEEEEEEEEEEEEEGEAAKFCTAWLLCVGSATVGCLLTKVLSLP
QLSERGTKHLEADLKYLSNVFHALDLPAPPVLEHVSLLASLSRDEAATHL
AQETVAGYGAAGIVLTKVERRLAEARGITHS*
back to top

mRNA from alignment at Ecto-sp13_S_contig6379:343..7460+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6379.17137.1 ID=mRNA_Ecto-sp13_S_contig6379.17137.1|Name=mRNA_Ecto-sp13_S_contig6379.17137.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7118bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6379:343..7460+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCTCCGATGTGTCTACGAAGGGCTTTGTGGTCGTGCAGCAGTCGGC GGGGCGATGCACCGAGCTGACGGGAGGGTACCAAGGCCGAGACTTGCTGA GAGAGGCGGCGGAAGCTCTTTCGACTTTCTTGAAGGTGCTCTCCTCTCCT CTCCTCTCCCCTCCCCGCTTGACACCGTTGTGTTGGTGGCGTTGTTTGAC GCCCATGTTGATTGCAGTGTTTGGAACATGACATTTTCGTGTCAAGTCGC CCGCAACATCGTTTAATCGGGAAATGGAGATACGTCAGCCCTTTTTCTAA GGCGTCATCCCACACCCCAAGCAAATCTTGGTACGTGTTTCACCTTGTGG TGGTTCGTGGTTTTGTGTGCGCCGTTCTGTAGGCGTGTCGATCTTTTCTA CCTCCGCCCATCTTACTGTACCCAAGGATGATGCTGGGCAACCCCGCTTA CATCCGAGCCTGCGCTTACCTTTGCTGTCCTAGTCTTGACCGGTTGTTAT CGAGACTTGTTAGTTGCTTCGGTTGCGTGCCGCAGGAAGCGTGCCGCATT TCACGTTCCGCGTCGTTGATTCACCTGACCAGTGCACTACTCCCCTCCCG CCTCCCATCCTTCCTACAACACTTGGCCACCGTGTCACACCTCCCCCACT TTCTTGTTGTCCGGGTCTCTTCCAAGCAAGGCAGTAAGGGACGCGGCTCG ACAGTCTCGTTCTTTTGGCAGCCAACCGGCGACCGGACGGGGCGAAACGA GCAGTCCTGCTTCGACCACGGCAGGCCGTTCACAAGGTTTGGTGGTACTG AGGGTGTAGTGATCTATGGCGGAATTGCTGTGTCAATCAAATAGATGCCT CTCTGTGGAGAGTTTTTTGGGATTTTTCGTGACCCATGACCCGGGGGAGC CGTTGGGTAATCCTACGGGGTAGGAAAAGCTGCGTCGTGATGAGGGCGTT CGGAACGGTCATTAAGTCAATACCTTCAACGACAACACAAGGACAAGGGC GACAACAACAAGCACGACACACGGACGACGACAAGAACAAGTACTACCAC AGCCGCCAGAATAACAACAGTGTGACTCTTCTTGTGTGTGTTTCCCACAG GTTCGAACGAGCCGTTACCATGTTGCCTGACACCGAGCGACCGCGTTGTC CCGGAGAAACACAGTACCTACCGTTGGTGCCACTGTAGGACGTACATGTA GAAAGAAAAATAGACCAAGTATCAAAAGACGCTGACCTGCGCACAACTCC CCCCCTCTCTCTTTCTCTGTGTTCTTGTCTCCCTTTATCCCTTTCTCCCT TGTCTGTCTGTCTGTCTGACTGTCTCTCTGTCTGTCTCTGTCTCTGTCTC TGTTTCTGCGCGTGTTTCTCCCTCTACCGCTTGCCCCCTCTCTCCCTATT CTGTCTGTTTGTCTTCGTCGCTCTCCTCTCTGTCTCTGGCTACATGCAGA CGAGGTGTTGGGTGTGGCTGCTGGTGCAGAAGAACACGAGAAGTACTTGG ATGGAGGAGGAGGAAACGGCGATTTCGACTGGCAGTACTTGCAGGGGGCG CTTGTTTTGCTCGGGGCTGCCGGTCGATGCCAACGGTGCTTCGCCGGGGT AGAGGAGGTGAGAAAGGTGGTCAGCAGAGCAGAAAAGGGTACAGCAGGGC AGAAAAGGGTACAGCGAAAGCATCCATGGCCGGTCTATGTCAAAGTGCTT CGTAGGCGTAGAAGAGGTGAGGAAAGGGTACAGCAGTACAGCAGACAATT GTACGGCGCAAGGGCACAACAAACGGCTGCAGCGAAACGGTATATCATGT TGGTACAACGGCAGAACGATACTGAAAAAGGGTAGAGCAATACCAATCAG CACTACGGTACCAAACAATACAGCGACAGGGTGCAGGAAAATGGTACCGG AAGATAATCAGCAACAGAGGTTATTATAAGGTTTACCAAACGATAGGGTA GCGAAGACAAAGCAGTACGATGGGTTAGTACACTAAATAGTCTTTGTCGG GCTGGGGCTGAAGATTGGCGGCAGAGTGGTACCGTACAGAAGGCACGGTC GTCGTATGGCTTGGGTTCAATCGTCGCAGTGGGCGCCGTCAAGACGCTGT CTTTTCTGCTGCTTTGTCGCCTTGAGACATCTTGGGAAGCTATAGCCAAT GAAATTCACTGTCACTCCGACTCTCGTGTAACGTTTTGCGTACATGCCAT GTTCTCAGCTTCCCCATCATCACCTAAGGATCGCATCTCGTTGTCGACTC TGAAGGCCTTTTTTTATGTTCTCGCGTTGATCGATGGTCGATACTGTGTT GCACCCTGTCGTTGGGGACGATGAGATGAGAGGACGTCCATCCCCGGATC TGGTTGAATGATCAACCACCCGTTGCATTTCGCCCGAACCCCACCCGTTC TCCAATAAAGCAATGTGAACGCGTTCTTTGTCCGTCTTTTGTGACTCGGC TATGTGAACGCATTCTGTCCCCGTCGTTCTTGATGCGTTCACAACGAACG TCATTGGTGAATTATTCAGGAGTTTGCTTCGGCGCTCCTCCGAGATAGGA TCGGCCTCTTCGCATCTTCCGCTCCCCGCCTCTCCTCCCTAGCACTGCCC GCCAACTCCCCCCTCCCCAACACCCACGGAGGGAGAGGGGCGGGAACCGT TCCCGAGAACGGCGCTTCCCCATTCCCCGCCACTGGTGGAGTGGCGGCGG CGGACGGCAGCAGCAGCAGCAGCAGCGAGGAAGGCAGGGTGGCCGTGCTG AGGAGCCTGCTTGCGAGGGTGAGGCTCGATGAGGACAGGACGGCGAGGGC GGAGACGAGGGCGAGCTTGATGGCGCTGGTAGAGCCGTCGGCGGCGGTTC CGGTGCGTGGCTGTATGGCTGTGGTTGGTTCGCGTGGCGGCGTCCTTTTG TTTGGTGTCGTTTCATGTGTTTGGCCGTCTTCACGAGTGGTACCGTCGTC TGACGGCCATGTGTCGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT AAGCATGACGTAACCATAATGATTGGTAATGTCTTGCAGTATAGGACGTG CGTTTCTTCCTGTGACGTGCCTCCGCTGTTGGTTGATGGTGCGGTATGGC AACGACGCCCCAAGACTGATGGCTGTCTTCTGCGTGTCCATCCACCTACC CACTCACCCACCTTCCTACATGCCACCTTACCCCTTGGTACGTGTTTTTG CTCCACGCCTCGTTTTTTGGTCACCGCTGTTTTGTTGCCGCTGTCAACTA CGAAATCTACGAAATCTACGAAATACTGGCATTTCACTAGGGAGACGTGC TGCCGGCGCCTGCGAGAGAAGTACGCGCGCTGGCGGCCGACGCGCGGTCT CTAGTGTTCGACGTCTGTTTCAAGCCAGTCACCGCTAGGCTAGACACGGT GCCGACCTTGGTGTCCTGGCAAGAGGAGCAGGGGGGAGGGGGTGGGGAAG GGTGGGGCGCGGACGTGGGGGATGGCGCGGATGAGTACGATACCGTTCCG CAGGCGTACATGACGCAGGTATGGCTGGCGCGGGAGGCGTAGGGGGCGTG TGTTTATGTGTGTTTGTGCAGGCGACAGCGGTGGTGTTAAGGATACAATA GGTGGCAATTTGTGTGCAAGGAGGCGTGTTGCATTGGTCCCCGACGCGCA GGTCGGAAGGCGGCATCCGCTAGATTTACTAATACTGAAACCGCCGTTCA AAGAGAATGGGCAGTTGTTCTATAGGAGTGACAGCTATAGTACATACCTC CCAAAATTTCATTTTTTCCACGAAGAATTGCAGTTGACCGTCATGTACAG TTTCTGCCCGAACCCGACAAGGTAACGTCTGTCGTGAACACCCACTTGGT ATAAAAACTAGACTTTCGGGAATGTTGCACCGTTGCGCATTACCGTCGCG CGCGTGAGTCAGGTCGGGGAGCACCTGCTGAGCTTGCTTCAGAACCTGGA GCCTTTCGCGAACAGCGACGCTTTCCAAGACGCGGTGGAGCCCACGCAGG ACCTACACCTCCTCACAGAAGCAGCATGGAGGTAATGCTGTAGGCCTGGC CCCTCACCGTGATCCTCCGCTGAATATTGGAGTATTGATGCTGTATGGTG TGCACAAGAGTATGTGGAGGGGAGAGAGTCGGGCACTTGGGGGGTGCTTG CACAAGCTGTTTCTAGTGGCTTGGATCAATGCCCATTCACCCGGTTGGTC GTGTCCGACTTGGTTGCTCCCTTCTTGGGGGGGGGAAATCACCCTCGTCG TATCGCGTTCACGTTCCCCTCCCCCTCTCCTTGAAGCATTCGAGCAGTTT GTGGGAAGAAAAAGCCGCTCTGTTTGTTTCTCCTAGCATTTGGAACCAGC CCTTTTTGGTGCATACACTCAAAGAGGTATGTTTGGACGCTCTAGCGCCA CGCCCAGTGGTTGGAAACCGGCGGATATCCCCCCAGACGCACAAGCCTTG ACGTTTTGGGGGGCAAGGTCACGTGTCCCCGTCTACCACCCGATGGACCA CGCCATGGGGCCATGGGGTGCCTCTTGGCGAAAATGTATTTGTAGGCTGA GATTGCTGCCGCCTTCAAGAACTGGTGAGTTGGTCCCTATAATTCATTTG CTCTACGCGCAAGACATGTATGGCGATGATGTCGCCATGCTCCAACCTAA CCCTGCTGGCGTCTGCATCATGTTTCGTGTCTGCAAAAAGAGTTGCAGAG AGCACCACAAATACTTCACCTCTTATTCGAGAACTCCCGGCGAGATGTGC GAAACGACAATGCCCCCCCACCACTTCCACTCCAGGGACTGCGGGCTAGC CTTGGATCTGGGAGAATCCGACCTCATGCTGCTGGAAACCTTGTCTGGCG CGAAAGCATCCACGGAGCCTCCGAAACACCGCTCTGCGCACAATGACAAC GCGGAGGGTGGCAACAATGATGAAGACGAAGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGGGAGAAGCGGCCAAGTTCTGTACGGCGTGGCTGC TGTGCGTCGGGAGCGCTACGGTCGGGTGTTTGTTGACCAAGGTGAGGTCG TTGCGGTGAAATCTGGCACGTTTCGATTGCGGTACAATATGGCCATGGAA GACACGTGACAGCACACGTGGGGGGTTCTACGGTGGAAACGGTTTTGGAA CATACAGATACGATGTGGAATTTTTACGCATTGGCAATGCTGCATAGTAC CCAGGATCTGCTAGGCTGCTGAAGACCTCCGTCAAGATATTGACTGATGG GTCAGAGTGGAGGACAGAATGGCTACGTAGCGTGAAGGCAAGAAACGAGG CTGTACTGGCTGTAACGACAATCCCTGCGCCATTGCGTTTCCTATACTTG CCGATTTTTAGCCGGCCCGCTCACGCAAGAATGCTTCCGTGTGTCAGAAG AGTTTCCCGTACTACGTTAAATGTTTCCCCCTTCTGTTGTCTTTGGAAGT GTAAGCCATGACTCCCCCCCCCCCCCCCCCCCCAAACTTTTTTTGGCCGT GCCCCCCCCGGTCTTTTCTTTTCCCCCAAACACCCCGGAAGGGAGCCCAA CCCCTGATACTTTTTGCCGGCGTCGCTCCCGAAGGTTCTATCACTCCCAC AACTCAGCGAGAGAGGCACTAAGCACCTGGAGGCAGACCTTAAGTACCTA TCGAATGTCTTCCACGCCTTGGATCTACCCGCTCCGCCTGTCCTGGAACA CGTTAGCCTGCTGGCTAGTCTCAGCAGGGATGAGGCTGCGACCCATCTGG CACAGGAGACAGTTGCCGGTGAGACAAAAGATTGGGGTGCTTTTGTTGCT GATCAAGAAACAAGTGACGCAAATGCACATTCTGGTATTGTGAAATGGAC GGAGGTGTACAAGTTTGTCTTTGGGGGTGTTTGGTTGAGAGAGAGATCTA CGGAGAGAGATAGGGGAGACAACGAGCTGGAGCGAGAGAAGCCATGACAA GGGGGGCTGAGAAAGTGTTGCTGAGATAGGGAGATGGTTGAGGACTTAAT TGTTGTGAGCTGAAAATGGATTTACAACCATGTTAGGATCGAGCTTTTTT TGAATCAATATCAGGTGGAACGAATGTCGTGGATGATCCATGATCTCATC AGTATTGTAAAGCAAATAGAGAACAACTGATAGAGGGCAGAGGCTTAAAT GTTGCACACATTCGTGGGCCCTCTGTATGGTGGATGTGTGCAAGGCCGGT TCACACGCCCACTACAATAGCGAGCACCGCCCGATCTCAAGCGTGAAAAA CAACTTGATAGCACTGTCTTCTTTGCCAAGCAAGATATATTTCACCCGCA CTTTAGAGCTGTAGAGGGCCCTTGGTTGCGTTTGGCGACCAAGCGAGGGA TAATTCCGCGACATGGCCCGCTTTCGCGTGTGCGCGGAACGTGCTGTGGA CAAGCAGAAGGTGTGTTAGATAGTGTCCCACGCTTTAAGGGGTGGGCACG AACACCGAGCGAGAGAAAAGAGGGATGCTTCGTTTCAGGGAAAACGACAC ATGAGGACGCCTGACTCAGGCGTTGCACCAGTACATGGGGTGAGAGAGCG GCCATGATACGCCGCGTGCATGACTTGGCGTAAGGATGACAAAAACGCGG ACCCCCCAGGCGTACGTCCGTTCCAAGCATGAATCCTTCCTCCTCCGTCC CTGTTTCAGCCCCGTCCACCGGGTGTCCCCCTGTCCTCTGTGTTTGCCAT CGGGGTTAGGTTTTTATCGCTTGGCAACGACGTTGTAAAACAAGCCGATT TCTTCGTGAGCTCGGCAACCAGGTTATCACTTTTTTTTCCGTTGCGGTAA AAATAGTGGTGGTCGAGTCGATTATGTTGTGCGGGGTCGAGAACACTTAC TCCGCTCAAAGGGGGTGATCGCACCACGTTGTCAAATGGTCAAGCACCCT CGAGGGAGTTACACAGTGCTTAGTACTGTCTCTGGAAGTACACCAGAAAA TATCAACTCATACGTAGCTGTCATCATTACACAAGGAAGCTTAAGTACCC CCCCCCCCCCCTGCATCCCCTGCTTGTGTGTGACGTTATAGGCTACGGGG CCGCTGGAATTGTCCTGACAAAGGTGGAGCGACGACTAGCGGAAGCGAGA GGCATCACCCATTCTTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6379:343..7460+

>mRNA_Ecto-sp13_S_contig6379.17137.1 ID=mRNA_Ecto-sp13_S_contig6379.17137.1|Name=mRNA_Ecto-sp13_S_contig6379.17137.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6379:343..7460+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCTCCGATGTGTCTACGAAGGGCTTTGTGGTCGTGCAGCAGTCGGC
GGGGCGATGCACCGAGCTGACGGGAGGGTACCAAGGCCGAGACTTGCTGA
GAGAGGCGGCGGAAGCTCTTTCGACTTTCTTGAAGGCAGTAAGGGACGCG
GCTCGACAGTCTCGTTCTTTTGGCAGCCAACCGGCGACCGGACGGGGCGA
AACGAGCAGTCCTGCTTCGACCACGGCAGGCCGTTCACAAGACGAGGTGT
TGGGTGTGGCTGCTGGTGCAGAAGAACACGAGAAGTACTTGGATGGAGGA
GGAGGAAACGGCGATTTCGACTGGCAGTACTTGCAGGGGGCGCTTGTTTT
GCTCGGGGCTGCCGGTCGATGCCAACGGTGCTTCGCCGGGGTAGAGGAGG
AGTTTGCTTCGGCGCTCCTCCGAGATAGGATCGGCCTCTTCGCATCTTCC
GCTCCCCGCCTCTCCTCCCTAGCACTGCCCGCCAACTCCCCCCTCCCCAA
CACCCACGGAGGGAGAGGGGCGGGAACCGTTCCCGAGAACGGCGCTTCCC
CATTCCCCGCCACTGGTGGAGTGGCGGCGGCGGACGGCAGCAGCAGCAGC
AGCAGCGAGGAAGGCAGGGTGGCCGTGCTGAGGAGCCTGCTTGCGAGGGT
GAGGCTCGATGAGGACAGGACGGCGAGGGCGGAGACGAGGGCGAGCTTGA
TGGCGCTGGTAGAGCCGTCGGCGGCGGTTCCGGGAGACGTGCTGCCGGCG
CCTGCGAGAGAAGTACGCGCGCTGGCGGCCGACGCGCGGTCTCTAGTGTT
CGACGTCTGTTTCAAGCCAGTCACCGCTAGGCTAGACACGGTGCCGACCT
TGGTGTCCTGGCAAGAGGAGCAGGGGGGAGGGGGTGGGGAAGGGTGGGGC
GCGGACGTGGGGGATGGCGCGGATGAGTACGATACCGTTCCGCAGGCGTA
CATGACGCAGGTCGGGGAGCACCTGCTGAGCTTGCTTCAGAACCTGGAGC
CTTTCGCGAACAGCGACGCTTTCCAAGACGCGGTGGAGCCCACGCAGGAC
CTACACCTCCTCACAGAAGCAGCATGGAGGGACTGCGGGCTAGCCTTGGA
TCTGGGAGAATCCGACCTCATGCTGCTGGAAACCTTGTCTGGCGCGAAAG
CATCCACGGAGCCTCCGAAACACCGCTCTGCGCACAATGACAACGCGGAG
GGTGGCAACAATGATGAAGACGAAGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGAGAAGCGGCCAAGTTCTGTACGGCGTGGCTGCTGTGCG
TCGGGAGCGCTACGGTCGGGTGTTTGTTGACCAAGGTTCTATCACTCCCA
CAACTCAGCGAGAGAGGCACTAAGCACCTGGAGGCAGACCTTAAGTACCT
ATCGAATGTCTTCCACGCCTTGGATCTACCCGCTCCGCCTGTCCTGGAAC
ACGTTAGCCTGCTGGCTAGTCTCAGCAGGGATGAGGCTGCGACCCATCTG
GCACAGGAGACAGTTGCCGGCTACGGGGCCGCTGGAATTGTCCTGACAAA
GGTGGAGCGACGACTAGCGGAAGCGAGAGGCATCACCCATTCTTGA
back to top