mRNA_Ecto-sp13_S_contig6351.17105.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6351.17105.1
Unique NamemRNA_Ecto-sp13_S_contig6351.17105.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: D8LRB2_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB2_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 9.240e-93
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 1 
Query:    1 VTEPHLKTAGQPLTHANRAESPTGMSTDLQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALGLL 444
            VTEPHLKTAGQPLTHANRAESPTGMSTDLQ+KLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQ IVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDV+VALGL+
Sbjct:  409 VTEPHLKTAGQPLTHANRAESPTGMSTDLQDKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQAIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVEVALGLV 556
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A835ZF29_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF29_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.320e-45
Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = 1 
Query:   97 LKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALGL 441
            LK LKLRRK+RF+ +RIEG EVV +  A PA G  +L+AALP+SDCRY VYDQ   T DGRK ++L F +W+PHNATP+ KMAY+HGK  VR+R+EGL+DVAAS+F DV  ALG+
Sbjct:    4 LKDLKLRRKYRFLVLRIEGGEVVPDATAPPAAGAPQLEAALPFSDCRYCVYDQDYTTDDGRKTSRLLFISWLPHNATPYAKMAYAHGKTAVRRRMEGLFDVAASAFADVAAALGI 118
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: W2GSY4_PHYPR (ADF-H domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=W2GSY4_PHYPR)

HSP 1 Score: 124 bits (311), Expect = 2.240e-33
Identity = 68/150 (45.33%), Postives = 98/150 (65.33%), Query Frame = 1 
Query:    1 VTEPHLKTAG--QPLTHANRAESPTGMSTD-LQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALGL 441
            + EPH+KTAG  Q + H +   +     TD +  + K LK+RRK+R++ +RIE  +VV +  A P+E  A+  AALP SDCRYAVYD   +TADGRK++KLFF TW+P N+ P  KMAY+H K  ++   EG ++V+A      ++ALG+
Sbjct:    1 MAEPHMKTAGVAQFIRHQDDVPANAIAPTDAVVAEFKQLKMRRKYRYILLRIEADKVVVDATAPPSETFADFSAALPESDCRYAVYDHEFLTADGRKSSKLFFVTWIPQNSHPGFKMAYTHAKSAIQSVCEGCFEVSAVI--KKEIALGM 148
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A484DX78_BRELC (ADF-H domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DX78_BRELC)

HSP 1 Score: 121 bits (304), Expect = 2.550e-32
Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 1 
Query:    1 VTEPHLKTAG--QPLTHANRAESPTGMSTD-LQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALGL 441
            +TEPH+KTAG  Q + H +   +     TD +  + K LK+RRK+R+   RIE  ++V +  A P+   A+  AALP SDCRYAVYD     +DGRK +KLFF TW+PHN+ P  KMAY+H K   +   EG Y+V+A +  DV + + +
Sbjct:    1 MTEPHMKTAGVAQYIRHQDDVPANAIAPTDAVVAEFKQLKMRRKYRYALFRIEADKIVVDITAPPSASFADFCAALPDSDCRYAVYDHDYQVSDGRKTSKLFFVTWIPHNSHPGFKMAYTHAKSAFQGVCEGCYEVSAVTKKDVAIGMNI 150
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: H3GS60_PHYRM (ADF-H domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS60_PHYRM)

HSP 1 Score: 120 bits (302), Expect = 5.120e-32
Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 1 
Query:    1 VTEPHLKTAG--QPLTHANRAESPTGMSTD-LQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAA 405
            + EPH+KTAG  Q + H +   +     TD +  + K LK+RRK+R+V  RI+G +VV    A P+   A+  AALP SDCRYAVYD   +T+DGRK++KLFF TW+P N+ P  KMAY+H K  V+   EG ++V+A
Sbjct:    1 MAEPHMKTAGVAQYIRHQDDVPANAIAPTDAVVAEFKQLKMRRKYRYVLFRIDGDKVVVADTAPPSASFADFNAALPDSDCRYAVYDHEFLTSDGRKSSKLFFVTWIPQNSHPGFKMAYTHAKSAVQSVCEGCFEVSA 138
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A3R7G6H8_9STRA (ADF-H domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6H8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.520e-32
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 1 
Query:    1 VTEPHLKTAGQPLTHANRAESPTGMSTDLQE---KLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAA 405
            + EPH+KTAG      ++ + P    T   E   + K LK+RRK+R+V +RIE   VV ++ A P+    + +AALP SDCRYAVYD   +T+DGRK++K+FF +W+P N+ P  KMAY+H K  VR   EG +DV+A
Sbjct:   32 MAEPHMKTAGVAQYIRHQDDVPANAITPTDEVIAEFKQLKMRRKYRYVLLRIEAAHVVVDSTAPPSATFKDFEAALPDSDCRYAVYDHEFLTSDGRKSSKIFFVSWIPQNSHPGFKMAYTHAKSAVRAVCEGCFDVSA 169
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A662WF96_9STRA (ADF-H domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF96_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.910e-31
Identity = 61/138 (44.20%), Postives = 89/138 (64.49%), Query Frame = 1 
Query:    1 VTEPHLKTAGQPLTHANRAESPTGM---STDLQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAA 405
            + EPH+KTAG      ++ + P      S ++  + K LK+RRK+R+V  RIEG +VV +  A P+   A+  AALP SDCRYAVYD   +T DGRK++K+FF TW+P N+ P  KMAY+H K  ++   +G ++V+A
Sbjct:    1 MAEPHMKTAGVAKYIRHQDDIPANAISPSDEVVAEFKQLKMRRKYRYVFFRIEGAQVVVDATAPPSATFADFMAALPDSDCRYAVYDHEFLTPDGRKSSKIFFVTWIPQNSHPGFKMAYTHAKSAIQAVCDGCFEVSA 138
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A3F2RS88_9STRA (ADF-H domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS88_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.500e-30
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 1 
Query:    1 VTEPHLKTAGQPLTHANRAESPTGMSTDLQE---KLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAA 405
            + EPH+KTAG      ++ + P    T   E   + K LK+RRK+R+V +RIE   VV ++ A P+    + +AALP SDCRYAVYD   +T+DGRK++K+FF +W+P N+ P  KMAY+H K  VR   EG +DV+A
Sbjct:  155 MAEPHMKTAGVAQYIRHQDDVPANAITPTDEVIAEFKQLKMRRKYRYVLLRIEAAHVVVDSTAPPSATFKDFEAALPDSDCRYAVYDHEFLTSDGRKSSKIFFVSWIPQNSHPGFKMAYTHAKSAVRAVCEGCFDVSA 292
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A024GN12_9STRA (ADF-H domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN12_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.230e-30
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1 
Query:    7 EPHLKTAGQPLT---HANRAESPTGMSTDLQEKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALG 438
            EPH+KT G   +   H + A +      ++ E+ K LKLRR++RF+ M+I   +VV ++ A P        AALP ++CRYAVYD    T DGRK+++L+F TW+P ++ P  KMAY+H K T+R +LEG+YD+ A +  ++   LG
Sbjct:    2 EPHMKTGGVAKSIRHHEDIAAATITPEENIYEEYKNLKLRRRYRFIIMKIIEAKVVIDSSAPPTSSFESFLAALPDAECRYAVYDHEFTTTDGRKSSRLYFVTWIPQSSAPGYKMAYTHAKHTLRTQLEGIYDLNAVTKQEIIEVLG 148
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BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Match: A0A3R7K336_9STRA (ADF-H domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K336_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.160e-30
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 1 
Query:    1 VTEPHLKTAGQPLTHANRAESPTGMSTDLQE---KLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAA 405
            + EPH+KTAG      ++ + P    T   E   + K LK+RRK+R+V +RIE   VV ++ A P+    + +AALP SDCRYAVYD   +T+DGRK++K+FF +W+P N+ P  KMAY+H K  VR   EG +DV+A
Sbjct:  259 MAEPHMKTAGVAQYIRHQDDVPANAITPTDEVIAEFKQLKMRRKYRYVLLRIEAAHVVVDSTAPPSATFKDFEAALPDSDCRYAVYDHEFLTSDGRKSSKIFFVSWIPQNSHPGFKMAYTHAKSAVRAVCEGCFDVSA 396
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6351.17105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LRB2_ECTSI9.240e-9397.30ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835ZF29_9STRA3.320e-4563.48ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
W2GSY4_PHYPR2.240e-3345.33ADF-H domain-containing protein n=17 Tax=Peronospo... [more]
A0A484DX78_BRELC2.550e-3244.00ADF-H domain-containing protein n=1 Tax=Bremia lac... [more]
H3GS60_PHYRM5.120e-3247.10ADF-H domain-containing protein n=1 Tax=Phytophtho... [more]
A0A3R7G6H8_9STRA8.520e-3245.65ADF-H domain-containing protein n=3 Tax=Phytophtho... [more]
A0A662WF96_9STRA2.910e-3144.20ADF-H domain-containing protein n=2 Tax=Nothophyto... [more]
A0A3F2RS88_9STRA1.500e-3045.65ADF-H domain-containing protein (Fragment) n=1 Tax... [more]
A0A024GN12_9STRA3.230e-3041.50ADF-H domain-containing protein n=1 Tax=Albugo can... [more]
A0A3R7K336_9STRA8.160e-3045.65ADF-H domain-containing protein n=1 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6351contigEcto-sp13_S_contig6351:5153..6241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score292.0
Seed ortholog evalue1.6e-76
Seed eggNOG ortholog2880.D8LRB2
Preferred nameCFL2
Model size447
KEGG koko:K05765,ko:K10363
KEGG Pathwayko04360,ko04666,ko04810,ko05133,map04360,map04666,map04810,map05133
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000302,GO:0000902,GO:0000904,GO:0000910,GO:0001101,GO:0001558,GO:0001667,GO:0001755,GO:0001838,GO:0001841,GO:0001842,GO:0001952,GO:0001954,GO:0002009,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003006,GO:0003674,GO:0003779,GO:0005102,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005829,GO:0005856,GO:0005865,GO:0005884,GO:0005886,GO:0005911,GO:0005938,GO:0006464,GO:0006468,GO:0006606,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006950,GO:0006952,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007166,GO:0007264,GO:0007265,GO:0007266,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007519,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008289,GO:0008360,GO:0008361,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009826,GO:0009856,GO:0009860,GO:0009870,GO:0009888,GO:0009893,GO:0009932,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010469,GO:0010591,GO:0010592,GO:0010593,GO:0010604,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010720,GO:0010769,GO:0010810,GO:0010811,GO:0010927,GO:0010941,GO:0010975,GO:0010976,GO:0014020,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014706,GO:0014823,GO:0014866,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016049,GO:0016310,GO:0016331,GO:0016363,GO:0016477,GO:0017038,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019902,GO:0019903,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021915,GO:0022008,GO:0022402,GO:0022411,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0030010,GO:0030016,GO:0030017,GO:0030018,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030043,GO:0030054,GO:0030154,GO:0030155,GO:0030162,GO:0030175,GO:0030239,GO:0030240,GO:0030307,GO:0030308,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030496,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030836,GO:0030838,GO:0030863,GO:0030864,GO:0030900,GO:0031002,GO:0031032,GO:0031090,GO:0031252,GO:0031323,GO:0031325,GO:0031334,GO:0031344,GO:0031345,GO:0031346,GO:0031347,GO:0031349,GO:0031674,GO:0031915,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032231,GO:0032232,GO:0032268,GO:0032270,GO:0032271,GO:0032273,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032432,GO:0032501,GO:0032502,GO:0032535,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0033036,GO:0033043,GO:0033267,GO:0033365,GO:0033554,GO:0034097,GO:0034399,GO:0034504,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034622,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035091,GO:0035148,GO:0035239,GO:0035295,GO:0035556,GO:0035690,GO:0035722,GO:0035821,GO:0036211,GO:0036379,GO:0036477,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042692,GO:0042742,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043197,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043242,GO:0043243,GO:0043244,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043412,GO:0043434,GO:0043624,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044309,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044706,GO:0044788,GO:0044794,GO:0044877,GO:0045088,GO:0045089,GO:0045184,GO:0045202,GO:0045214,GO:0045472,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0045792,GO:0045862,GO:0045926,GO:0045927,GO:0046677,GO:0046686,GO:0046716,GO:0046907,GO:0048046,GO:0048167,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048598,GO:0048638,GO:0048640,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048762,GO:0048814,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0048870,GO:0050767,GO:0050769,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0050896,GO:0051014,GO:0051015,GO:0051017,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051146,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051301,GO:0051493,GO:0051494,GO:0051495,GO:0051510,GO:0051511,GO:0051641,GO:0051649,GO:0051674,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051893,GO:0051894,GO:0051960,GO:0051962,GO:0055001,GO:0055002,GO:0055044,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060429,GO:0060485,GO:0060491,GO:0060537,GO:0060538,GO:0060548,GO:0060560,GO:0060562,GO:0060571,GO:0060998,GO:0060999,GO:0061001,GO:0061061,GO:0061572,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070301,GO:0070555,GO:0070671,GO:0070727,GO:0070741,GO:0070848,GO:0070849,GO:0070887,GO:0070925,GO:0071236,GO:0071310,GO:0071345,GO:0071347,GO:0071349,GO:0071354,GO:0071356,GO:0071362,GO:0071363,GO:0071364,GO:0071375,GO:0071417,GO:0071495,GO:0071689,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072175,GO:0072594,GO:0080090,GO:0080134,GO:0090066,GO:0090109,GO:0090732,GO:0097060,GO:0097237,GO:0097435,GO:0097447,GO:0097458,GO:0098542,GO:0098590,GO:0098794,GO:0098858,GO:0099080,GO:0099081,GO:0099175,GO:0099177,GO:0099512,GO:0099513,GO:0099568,GO:0099601,GO:0110053,GO:0120025,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1900006,GO:1900449,GO:1900451,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901879,GO:1901880,GO:1901881,GO:1901888,GO:1901890,GO:1901981,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1902936,GO:1902950,GO:1902951,GO:1903047,GO:1903391,GO:1903393,GO:1903827,GO:1903829,GO:1904062,GO:1904064,GO:1904783,GO:1905809,GO:1905871,GO:1905873,GO:1905874,GO:1905875,GO:1990314,GO:2000026,GO:2000114,GO:2000145,GO:2000146,GO:2000147,GO:2000273,GO:2000310,GO:2000769,GO:2000771,GO:2000782,GO:2000784,GO:2000812,GO:2000814,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.actin filament depolymerization
EggNOG OGsKOG1735@1,KOG1735@2759
Cds size447
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463880.137383-CDS-Ecto-sp13_S_contig6351:5152..54911681463880.137383-CDS-Ecto-sp13_S_contig6351:5152..5491Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6351 5153..5491 +
1681463880.1513624-CDS-Ecto-sp13_S_contig6351:6133..62411681463880.1513624-CDS-Ecto-sp13_S_contig6351:6133..6241Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6351 6134..6241 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6351.17105.1prot_Ecto-sp13_S_contig6351.17105.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6351 5153..6241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6351.17105.1

>prot_Ecto-sp13_S_contig6351.17105.1 ID=prot_Ecto-sp13_S_contig6351.17105.1|Name=mRNA_Ecto-sp13_S_contig6351.17105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
VTEPHLKTAGQPLTHANRAESPTGMSTDLQEKLKALKLRRKHRFVTMRIE
GTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQVIVTADGRKANKLFF
FTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVKVALGLL*
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mRNA from alignment at Ecto-sp13_S_contig6351:5153..6241+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6351.17105.1 ID=mRNA_Ecto-sp13_S_contig6351.17105.1|Name=mRNA_Ecto-sp13_S_contig6351.17105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6351:5153..6241+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTAACAGAGCCACACCTCAAGACCGCTGGGCAGCCCTTGACCCACGCGAA
CCGCGCGGAGTCCCCAACGGGGATGTCGACCGACCTCCAGGAGAAGCTCA
AGGCGCTCAAGTTGCGCCGCAAGCACCGGTTCGTCACGATGCGAATCGAG
GGGACGGAGGTGGTGGCGGAGACGGTGGCGGCGCCCGCGGAGGGGCCGGC
GGAGCTCAAGGCGGCGCTGCCCTACAGCGATTGCCGGTACGCGGTCTACG
ACCAGGTGATCGTTACCGCGGATGGCCGCAAGGCCAACAAGCTCTTCTTT
TTCACGTGGGTTCCGCACAACGCCACGCCCCACAACAAGGTATGTAGTGC
ATGTCTCGTTCTTTTCTTGTGTTGAAGGACGTTGGCGTTGACGTGTTCGA
TACAGCGAGGGGGGGGGGGGTTGAAGCAAGCCAGAATAATCGTGTACCCA
AAGGTCGGTTTGTGCTGCATGCAGTGTTCTGGCCTGTGCCCGCTCGTTTA
ACGATAGATTTGGTGTGTTTCATCAATGTGGAGGGGGATGGCAAGCTTTG
GGCGCTGTGGTCGGCTTATCCCGAGCCTAGCGTTGGCTACACCCCAACGT
TAGTGTGGCCCAGACCCCCCCCTAGACTCATCGTGTTGCGTCTCTTGCGG
ATGACCCATGCCTACCGGGCTGTTCAACTCCGATGAAGCCGAAAGTCCCC
GGCGAATGCGCTTCCTCCTGACAACCATTCTACACGCAGTCGCGACCGAG
AGCATCGCACCACTGCTCCGATGTAGAGGTGAATACTCTACGACTTGACG
TTCTTCATTCACCTGATTCATCGGCGATGGGGGCCGTGTCCCTCGCGTCT
GTCGGTAGGTCCTGCGTTCGCGATAGATTGGTGTTGTATTGCCATCAGTT
TTTTTTGTTTTCGTATGAACACCGACCACTGTGCATGGATGCACACCTCG
ACTTTTATTTTTGTCTTTTGTCGGCACACAGATGGCGTACTCTCACGGGA
AGGTGACGGTGAGGCAACGCCTGGAGGGTTTGTACGATGTGGCGGCCAGC
AGCTTCGGGGACGTAAAGGTGGCGCTGGGGTTGCTATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6351:5153..6241+

>mRNA_Ecto-sp13_S_contig6351.17105.1 ID=mRNA_Ecto-sp13_S_contig6351.17105.1|Name=mRNA_Ecto-sp13_S_contig6351.17105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6351:5153..6241+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTAACAGAGCCACACCTCAAGACCGCTGGGCAGCCCTTGACCCACGCGAA
CCGCGCGGAGTCCCCAACGGGGATGTCGACCGACCTCCAGGAGAAGCTCA
AGGCGCTCAAGTTGCGCCGCAAGCACCGGTTCGTCACGATGCGAATCGAG
GGGACGGAGGTGGTGGCGGAGACGGTGGCGGCGCCCGCGGAGGGGCCGGC
GGAGCTCAAGGCGGCGCTGCCCTACAGCGATTGCCGGTACGCGGTCTACG
ACCAGGTGATCGTTACCGCGGATGGCCGCAAGGCCAACAAGCTCTTCTTT
TTCACGTGGGTTCCGCACAACGCCACGCCCCACAACAAGATGGCGTACTC
TCACGGGAAGGTGACGGTGAGGCAACGCCTGGAGGGTTTGTACGATGTGG
CGGCCAGCAGCTTCGGGGACGTAAAGGTGGCGCTGGGGTTGCTATAG
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