prot_Ecto-sp13_S_contig10144.171.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10144.171.1
Unique Nameprot_Ecto-sp13_S_contig10144.171.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.940e-66
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:   18 LLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
             +  N P +NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   13 FVSSNKPTSNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A7S0ICQ7_MICPS (Histone H4 n=3 Tax=Viridiplantae TaxID=33090 RepID=A0A7S0ICQ7_MICPS)

HSP 1 Score: 202 bits (515), Expect = 2.250e-65
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 0 
Query:   20 HKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            HK+T   NMSGRGKGGK LGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    4 HKHTNSNNMSGRGKGGKXLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 114
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A446IM63_TRITD (Histone H4 n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446IM63_TRITD)

HSP 1 Score: 204 bits (518), Expect = 3.090e-65
Identity = 115/137 (83.94%), Postives = 117/137 (85.40%), Query Frame = 0 
Query:    2 LASPSPPPA-HNNNYLPLL--HKNTPYTN-----MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            L  PSPPPA H  N  PLL  H     T      MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   20 LKIPSPPPANHKTNSPPLLDLHPLAARTKERASAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 156
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A453N2X0_AEGTS (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453N2X0_AEGTS)

HSP 1 Score: 201 bits (510), Expect = 1.440e-64
Identity = 106/115 (92.17%), Postives = 108/115 (93.91%), Query Frame = 0 
Query:   18 LLHKNTPYTN--MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            LLH  TP     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 LLHFQTPSAPPIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 117
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A7S4DKQ9_9EUKA (Histone H4 n=4 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S4DKQ9_9EUKA)

HSP 1 Score: 200 bits (509), Expect = 1.910e-64
Identity = 105/114 (92.11%), Postives = 107/114 (93.86%), Query Frame = 0 
Query:   17 PLLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            P  HK T    MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE+VIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    2 PNDHKPTRTATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLESVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A5D2MDG6_GOSTO (Histone H4 (Fragment) n=1 Tax=Gossypium tomentosum TaxID=34277 RepID=A0A5D2MDG6_GOSTO)

HSP 1 Score: 201 bits (512), Expect = 2.020e-64
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 0 
Query:   19 LHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            L K+  ++ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   38 LEKSFDFSKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 149
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A8B8CHU8_CRAVI (Histone H4 n=4 Tax=Bilateria TaxID=33213 RepID=A0A8B8CHU8_CRAVI)

HSP 1 Score: 204 bits (518), Expect = 2.080e-64
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:   15 YLPLLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            YL  L ++T   NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:  100 YLVGLFEDTNLANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 215
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A7S3CDM2_9CHLO (Histone H4 n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S3CDM2_9CHLO)

HSP 1 Score: 201 bits (510), Expect = 2.340e-64
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:   18 LLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            L ++ TP T MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   21 LPNEETPAT-MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: W5QFR6_SHEEP (Histone H4 n=4 Tax=Laurasiatheria TaxID=314145 RepID=W5QFR6_SHEEP)

HSP 1 Score: 199 bits (507), Expect = 3.080e-64
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0 
Query:   23 TPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            T Y  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 TSYKAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 108
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Match: A0A4D9CLB0_9STRA (Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLB0_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.090e-64
Identity = 105/113 (92.92%), Postives = 106/113 (93.81%), Query Frame = 0 
Query:   18 LLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
            LL      T MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:    7 LLPSRDNLTAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 119
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10144.171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L6V663_9STRA1.940e-6693.81Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A7S0ICQ7_MICPS2.250e-6594.59Histone H4 n=3 Tax=Viridiplantae TaxID=33090 RepID... [more]
A0A446IM63_TRITD3.090e-6583.94Histone H4 n=1 Tax=Triticum turgidum subsp. durum ... [more]
A0A453N2X0_AEGTS1.440e-6492.17Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R... [more]
A0A7S4DKQ9_9EUKA1.910e-6492.11Histone H4 n=4 Tax=Chlorarachniophyceae TaxID=2919... [more]
A0A5D2MDG6_GOSTO2.020e-6491.96Histone H4 (Fragment) n=1 Tax=Gossypium tomentosum... [more]
A0A8B8CHU8_CRAVI2.080e-6491.38Histone H4 n=4 Tax=Bilateria TaxID=33213 RepID=A0A... [more]
A0A7S3CDM2_9CHLO2.340e-6493.81Histone H4 n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7... [more]
W5QFR6_SHEEP3.080e-6495.37Histone H4 n=4 Tax=Laurasiatheria TaxID=314145 Rep... [more]
A0A4D9CLB0_9STRA3.090e-6492.92Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 47..66
score: 93.38
coord: 32..43
score: 95.59
coord: 89..103
score: 91.96
coord: 67..87
score: 93.56
coord: 104..116
score: 90.05
coord: 116..127
score: 97.79
IPR001951Histone H4SMARTSM00417h44coord: 43..117
e-value: 1.8E-29
score: 113.9
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 63..123
e-value: 4.0E-8
score: 33.3
IPR009072Histone-foldGENE3D1.10.20.10coord: 29..130
e-value: 5.3E-60
score: 201.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 10..127
NoneNo IPR availablePANTHERPTHR10484:SF171coord: 17..130
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 17..130
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 42..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10144contigEcto-sp13_S_contig10144:2558..2950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10144.171.1mRNA_Ecto-sp13_S_contig10144.171.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10144 2558..2950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10144.171.1 ID=prot_Ecto-sp13_S_contig10144.171.1|Name=mRNA_Ecto-sp13_S_contig10144.171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
PLASPSPPPAHNNNYLPLLHKNTPYTNMSGRGKGGKGLGKGGAKRHRKVL
RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTY
TEHARRKTVTAMDVVYALKRQGRTLYGFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS