mRNA_Ecto-sp13_S_contig6346.17098.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6346.17098.1
Unique NamemRNA_Ecto-sp13_S_contig6346.17098.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: D8LPN4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN4_ECTSI)

HSP 1 Score: 1223 bits (3165), Expect = 0.000e+0
Identity = 606/625 (96.96%), Postives = 618/625 (98.88%), Query Frame = 1
Query:    1 MELQPNGMVSAVAYVNGGAKMDSDARDAIQEQADAAPIAVRGSDALLEKRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVRKSPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTVVPNRLSSVRELLHEQLQTWLPKFCVAVSNCDDKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            MELQPNGMV+AVAYVNGGAKMD+DARDAIQEQADAAP+AVRGSDALLEKRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVRKSPRK SEGLLCKRPEPGDEVSE+LKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAV GAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDS PTTTVVPNRLSSVRELLHEQL+TWLPKFCVAVSNCDDKG GRQAEETSEAVAHPGYEV+RPFTMLRYVLVGIVYEIVNR+PQQLDALPVELWK LCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMV+SKGRLVA+LVDSH DGDKSAGNRG+VLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVP+YYANGPE +GQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK
Sbjct:    1 MELQPNGMVAAVAYVNGGAKMDNDARDAIQEQADAAPVAVRGSDALLEKRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVRKSPRKGSEGLLCKRPEPGDEVSEQLKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVTGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSQPTTTVVPNRLSSVRELLHEQLRTWLPKFCVAVSNCDDKGPGRQAEETSEAVAHPGYEVKRPFTMLRYVLVGIVYEIVNRDPQQLDALPVELWKALCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVVSKGRLVARLVDSHADGDKSAGNRGFVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPQYYANGPEALGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 625          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A835Z422_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z422_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 3.510e-119
Identity = 250/690 (36.23%), Postives = 346/690 (50.14%), Query Frame = 1
Query:  145 KRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVRK----------SPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGA--VAGA-----------AATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSD-----------SYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTVVPNRLSSVRELLHEQLQTWLPKFCVAVS----------NCDDKGSGR-----------------------------------------------------------------------------QAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQ------------------------------WRNFLGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQ 1761
            KR     L++RMLD+++P +T+KMI+FL  DG CE++V FI+Q+ EE E ++          +P +A E  L  RPEPGDE++ ELKRS+RATMLL++ +PS+   +FLAK+AR +T ++ KVFW SAKGSLHHAC VLD+LLR  AD+                                   LT+PS  G   + GA           A  YQ +  S+W++YS LADWRFLL +A +++  +  D           ++ASACAD+LLE V+ LS+D+NGELLLQP+ +C ELV+GL  +A+  G    +RTD+AR L+G+ QKAA   I     R +         ++PNRL SVR L+H  L+  L     +VS               G+GR                                                                             + +    AV HPGY VERPFT+LRY+L+ I+ E+V+ +  QLD L    W  +C+W   YPHN L+    Y+L+   LRCN+ GALR+ +S+ +LV+ + +++V    +A NRG++LQLCN IRLQADT+PP+ FLRN+L  HE+                              WR FL  LRE TL QQ  G+GF VP+        P   GQQ
Sbjct:   48 KRLHSHYLLSRMLDLEQPIITDKMIEFLLQDGVCEIFVAFITQVPEEFEDQEHINEPPPADGAPNRADE--LPPRPEPGDELTYELKRSYRATMLLSSDQPSNALLSFLAKRARVITTSIFKVFWRSAKGSLHHACRVLDHLLRHQADQ-----------------------------------LTYPSAAGCSGMVGAGMRGNFNGATCAIPYQATPQSRWKMYSSLADWRFLLVLASHVYAAQYPDVRTVPAAQSTPAHASACADMLLEAVEVLSADENGELLLQPLAHCPELVNGLVDIALAAGADRTQRTDAARVLVGLIQKAAPDQIACQVMRPT---GPQQAALIPNRLKSVRTLMHRLLRVRLADISRSVSAGYTPALFERRRSLGGAGRGEAGGAAAXXXXXXXXXXXXXXXXXXXXXDEVEADAQSTVVADEQQSQDENAASGAANHQQGMNGSAQGGVCAAACDEGDRAEGAVLHPGYTVERPFTLLRYLLMSIIVEVVHLDSTQLDFLDENFWAAVCTWVIEYPHNTLFQCALYRLLVHALRCNSEGALRLALSRCKLVSTMAEAYVAEGGAAVNRGFILQLCNVIRLQADTLPPSAFLRNFLQGHERQVSRLLRATPCISHRSGPYINCSEFTCTCSWRTFLPVLRERTLAQQEVGMGFVVPM--------PSRQGQQ 689          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A5D6Y2H7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2H7_9STRA)

HSP 1 Score: 382 bits (981), Expect = 2.510e-118
Identity = 228/599 (38.06%), Postives = 334/599 (55.76%), Query Frame = 1
Query:  145 KRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDE--------VRKSPRKASEGL--------LCKRPEPGDE----VSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHEQLQTWLPKFC-VAVSNCDDKGSGRQAEETSE-----AVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDA-LPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQPLPEDV-GIDHGSAYARALGFEDDIVWLPDE 1851
            +  A   L A++LD++ P +T  ++  L+ D  C L+V++I+++   DE        +R  P   +E              P P +     V+ EL+RSFRATMLL N + SD   TFL +K+  LT  +  VF   A+G+L HAC V+DYLLR Y D+V++ +GR   ++ R++GPML + +++ V+E  + ++  P     +      Y +S P KW  +  L+DW+ LL +AE++  R  S+ + +  AD+ +E++DRL++DDNG LLLQP  YC EL+ GL   AVD G    +RT + + +  + QK+    +      TS Y S   T V  V N+L+ +RE +   ++T + K     V   +D+ +     ++ +     AV H GY V+ PFT  R  LV  + EIV  NP++L A     +W+VL SWFF Y HNNLYH+ FY+L+F  LR +N  AL  ++ K +LV  LV+ +  G   A NRGY+LQ CNAIRLQA +  P  FLRN+L SH  WR F   LR  T      GLGF VP + R      ++       ED  GIDHGS +AR+LGF DD+ W PD+
Sbjct:   21 QHEAASALFAKVLDVENPVVTSTLVNLLNEDEPCALFVSYITRLAGSDEAAARGDSLIRDGPAPHAEQQQQGEHADDADDAPPPAERDTVSVTGELRRSFRATMLLTNDDASDALITFLPRKSALLTKCIFPVFQRDARGNLRHACRVIDYLLRMYLDDVYDVVGRDAATVARYMGPMLEFIDHAYVAEAFLTMVCKPHSAALMR----YYASSPPKKWAFFRALSDWKLLLVLAEHVHSRRYSEKHNAGAADVFVELLDRLAADDNGGLLLQPAAYCPELLAGLVDAAVDPGRTPGQRTGAMKCVFRLLQKSTTEKVQ--GPPTSPYQSFGGTIVNLVANQLAPLRERVFALVETHMDKLLRYLVEKYEDQQNIEMDLQSGKPLPDGAVRHTGYVVKVPFTEFRLTLVEALVEIVAHNPRKLGAHFDAGVWRVLVSWFFEYAHNNLYHAAFYQLLFIALRTDNQAALEALVKKQKLVTALVEHYRHGGPGASNRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRAFEPELRAVTSSACVSGLGFTVPQMTRPGMFQKDSWQVLASDEDESGIDHGSEFARSLGFIDDVAW-PDD 612          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A662YFK0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFK0_9STRA)

HSP 1 Score: 374 bits (961), Expect = 3.050e-115
Identity = 230/613 (37.52%), Postives = 348/613 (56.77%), Query Frame = 1
Query:  127 SDALLEKRRADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIG---------EEDEVRKSPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGL--AAMAVD-QGLP---LERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHEQLQTWLPKFCVAVSN---------CDDKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDA-LPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSH-VDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVP--VVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            ++A    R     L+ R+L    P +T  ++  LS D AC L+ ++I+++          +    +K    AS G   +R    ++V+ EL  SFRATMLL N + +D   TFL  K++ LT  +  +F   A+G+L HAC VLD+LLR Y D+V++ LG S  +++R++G ML + E++PV+E  + L+  P     +      Y ++ P KW  +  LA+W+ LL +A+++   +  +++    AD+ +E++DRL++D+NGELLLQP  YC EL++GL  AA+A D  G P   + +RT + + +  + QK+A   +      TS Y S   T V  VPN+L+ +RE +++ ++  L +    + +           D  SG+   E   AV H  Y V+ PFT LR  LV  + E+V  NPQ +     V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL +++ K +LV  LVD +  DGD ++ NRGY+LQ CNAIRLQA +  P  FLRN+L SH  WR+F   LR  T      GLGF VP  + P Y  +  + + +Q      GIDHGS +AR+LGF DD+ W  D+   + KK+
Sbjct:   27 AEAQATSREEYDALLRRVLAEPSPLVTATLVSVLSQDTACALFASYITRLEGSSASPLVLDGPNAQKLATAASSGA-ARRESESEDVTPELLTSFRATMLLTNDDSADALLTFLGAKSKLLTRCLFPIFQRDARGNLRHACRVLDHLLRLYLDDVYDVLGTSTATVQRYMGSMLPYLEHAPVAELFITLVCKPHSAALLR----FYASTPPKKWAFFRALAEWKLLLVLADHVGSADYGEAHTIGAADVFVELLDRLAADENGELLLQPAAYCPELLEGLIRAAVAPDVDGRPPRSVGQRTAAIKCVFRLLQKSAREKVQ--GPPTSPYQSFGATIVNLVPNQLAPLRERIYKLVEQHLDELLRFLIHKYEHQQNIAMPDVASGQPLPEG--AVRHTAYVVKVPFTELRLTLVETLVELVAHNPQLMSQHFDVNVWRVLVAWFFEYAHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVDHYRADGDATS-NRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRSFEQELRSQTDLLCVNGLGFTVPQAIRPGYQKDSWQMLNEQ----QAGIDHGSEFARSLGFVDDVAWPEDDVADSTKKR 625          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: M4C5A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5A3_HYAAE)

HSP 1 Score: 370 bits (951), Expect = 1.940e-114
Identity = 219/596 (36.74%), Postives = 339/596 (56.88%), Query Frame = 1
Query:  166 LIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDE--------VRKSPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVD----QGLP---LERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHE-------QLQTWLPKFCVAVSNCDDKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQL-DALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSH-VDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            LI  +L  D+P +T  ++  LS D A   +  FI+++  +DE         R       + L  ++ E  D+V+ EL  S+RATMLL N + ++   TFL  K++ LT     VF   A+G+L HAC V+D LLR Y D+V++ LG+  +++ER++G ML + EY+PV+E  + ++  P     +      Y ++ P KW  +  LA+W+ LL +A +++ RE  ++++   AD+ +E++DRL++D+NG+LLLQP  YC EL++GL + AV+    +  P   + +RT + + +  + QK+    +      TS Y S   T V  VPN+L  +RE +++        L  +L +  V+  N +  G        + AV H  Y V+ PFT LR +L   + E++  N + + +   V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL +++ K +LV  LV+ +  DGD S  N+GY+L++CNAIRLQA +  P  FLRN+L SH  WR+F   LR+ T      GLGF VP    Y  N  +   ++   +D GIDHGS +AR+LGF DD+ W  D  V   KK+
Sbjct:   25 LIRSVLSKDDPVVTAPLVSALSNDVALARFANFITRVQSDDENPTFPDGPTRAKRANTIDVLTRRKDEALDDVTPELLTSYRATMLLTNDDTAEALLTFLGDKSKLLTRCFFAVFDGDAQGNLRHACRVIDQLLRFYLDDVYDVLGKDAKTVERYMGAMLPYLEYAPVAELFLTIICKPHSAAVMR----FYTSTPPKKWAFFRALAEWKVLLVLATHVWSREYGETHSIGAADVFVELLDRLAADENGQLLLQPAAYCSELLEGLISAAVEPDCNKAAPQRTVAQRTAAMKCVFRLLQKSKLEKVQ--GPPTSPYQSFGATIVNLVPNQLEPLREKIYQLVEQHLGDLLNYLIQKYVSQQNIEMPGGESGKPLPASAVRHTAYVVKVPFTELRLMLAETLVEVMAHNSRLMSEHFDVNVWRVLLTWFFEYAHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVERYRADGD-STSNKGYILRICNAIRLQAASQSPDAFLRNFLQSHTTWRSFEQELRDQTTLLCMNGLGFTVPQ--GYQDNSWQMQSEE---QDTGIDHGSKFARSLGFTDDVAWPEDNAVDGGKKR 608          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A3M6VW11_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW11_9STRA)

HSP 1 Score: 369 bits (947), Expect = 1.570e-113
Identity = 224/599 (37.40%), Postives = 346/599 (57.76%), Query Frame = 1
Query:  166 LIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDE--VRKSPRKA----SEGLLCKRPEPGDE-VSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAV---DQGLPLER----RTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHE-------QLQTWLPKFCVAVSNCD--DKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQL-DALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSH-VDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVP--VVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            L+  +L  D P +T  ++  LS D     +VTF++++  + E  +   P  A    +E +  +R +   E V+EEL +S+RATMLL N + ++   TFL  K++ LT  + +VF   AKG+L HAC V+D LLR Y D+V++ LG+   ++ R++G ML + E++PV+E  + L+  P    A+      Y ++ P KW  +  L++W+ LL +A ++   E  +++    AD+ +E++DRL++D+NG+LLLQP  YC EL++GL   AV   D    ++R    RT + + +  + QK+    +      TS Y S   T V  VPN+L  +RE ++E       +L  +L +  V   N +  ++ SG+   E   AV H  Y V+ PFT LR +LV  + E++  NP+ + +   V +W+VL +WFF Y HNNLYH+ FY+LVF  LR  N  AL++++ K RL   LV+ +  DGD ++ N+GY+LQ+CNAIRLQA +  P  FLRN+L SH  WR F   LR+ T      GLGF VP  V P Y     + + ++   +D GIDHGS +AR+LGF DD+ W  D+ +   KK+
Sbjct:   22 LVCSILAKDNPVVTASLVSALSNDALLAHFVTFVARVDSDSEQTLPDGPDAAKVATTEDVANRREDETQENVTEELVKSYRATMLLTNDDTAEALLTFLGDKSKLLTRCLFRVFQCDAKGNLRHACRVIDQLLRFYLDDVYDVLGKDASTVARYMGAMLPYLEHAPVAELFLTLVCKPHSAAAMR----FYTSTPPKKWAFFRALSEWKVLLVLANHVCSTEYGETHTVGAADVFVELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVELEDSKKTMQRSVGQRTAAMKCVFRLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLGPLREKIYELVEQHLGELLKYLIQKYVIQQNIEMPNEESGKPLPEG--AVRHTAYVVKVPFTELRLMLVETLVEVMAHNPRLMSEHFDVNVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTENQQALKVLVKKLRLATLLVEHYRADGDATS-NKGYILQICNAIRLQAASQSPDAFLRNFLQSHTTWRGFEKELRDRTNSLCVNGLGFTVPQAVRPGYQKGSWQMLNEE---QDAGIDHGSEFARSLGFMDDVAWPEDDAMDGNKKR 608          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A662Y9Z1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9Z1_9STRA)

HSP 1 Score: 373 bits (957), Expect = 4.460e-112
Identity = 226/599 (37.73%), Postives = 340/599 (56.76%), Query Frame = 1
Query:  166 LIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIG---------EEDEVRKSPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGL--AAMAVD-QGLP---LERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHEQLQTWLPKFCVAVSN---------CDDKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDA-LPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVP--VVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            L+ R+L    P +T  ++  LS D AC L+ ++I+++          +  + +K    AS G   +  E  D V+ EL  SFRATMLL N + +D   TFL  K++ LT  +  +F   A+G+L HAC VLD+LLR Y D+V++ LG S  +++R++G ML + E++PV+E  + L+  P     +      Y ++ P KW  +  LA+W+ LL +AE++   +  +++    AD+ +E++DRL++D+NGELLLQP  YC EL++GL  AA+A D  G P   + +RT + + +  + QK+A   +      TS Y S   T V  VPN+L+ +RE +++ ++  L +    + +           D  SG+   E   AV H  Y V+ PFT LR  LV  + E+V  NPQ +     V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL +++ K +LV  LVD +     +  N+GY+LQ CNAIRLQA +  P  FLRN+L SH  WR+F   LR  T      GLGF VP  + P Y  +  + + +Q      GIDHGS +AR+LGF DD+ W  D+   + KK+
Sbjct:  288 LLRRVLAEPSPLVTATLVSVLSQDTACALFASYITRLEGSGAPPLLLDGPDAQKLATAASSGAARRESELED-VTPELLTSFRATMLLTNDDSADALLTFLGAKSKLLTRCLFPIFQRDARGNLRHACRVLDHLLRLYLDDVYDVLGASTATVQRYMGSMLPYLEHAPVAELFITLVCKPHSAALLR----FYASTPPKKWAFFRALAEWKLLLVLAEHVGSADYGEAHTIGAADVFVELLDRLAADENGELLLQPAAYCPELLEGLIRAAVAPDVDGRPPRSVGQRTAAIKCVFRLLQKSAREKVQ--GPPTSPYQSFGATIVNLVPNQLAPLRERIYKLVEQHLDELLRFLIHKYEHQQNIAMPDVASGQPLPEG--AVRHTAYVVKVPFTELRLTLVETLVELVAHNPQLMSQHFDVNVWRVLVAWFFEYAHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVDHYRADGNATSNKGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRSFEQELRSQTDLLCVNGLGFTVPQTIRPGYQKDSWQMLNEQ----QAGIDHGSEFARSLGFVDDVAWPEDDVADSTKKR 873          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: K3WQ60_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ60_GLOUD)

HSP 1 Score: 361 bits (926), Expect = 2.630e-110
Identity = 217/589 (36.84%), Postives = 331/589 (56.20%), Query Frame = 1
Query:  175 RMLDMDEPFMTEKMIQFLSVDGACELYVTFISQI-GEEDEVRKSPRKASEGLLCKRPEPGDEVSEELKRSFRAT----------MLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSK-WRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQ--GLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHEQLQTWLPKFC-VAVSNCDDK-------GSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQL-DALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPRY----YANGPETMGQQPLPEDV-GIDHGSAYARALGFEDDIVWLPDE 1851
            ++LD++ P +T  ++  L+ D AC L++++I+++ G +  +   PR AS+      PE   +  +  + + R T          MLL N + SD   TFL KK+  +T  +  +F  +A+G+L H C V+D+LLR Y D+V++ +GR+  ++ER++G ML   E++PVSE  + ++  P      + A   + TS+P K W  +  L++W+ LL +A++++  E S+ +    AD+ +E++DRL++D+NGELLLQP  Y  EL+DGL   AVD+  G    +RT + + +  + QK+    +      TS Y S   T V  VPN+L+ +RE + E  +T + K     V   +D+        SG+   +   AV H GY V+ PFT  R  LV  + E+V  NP  + +     +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N   L +++ K +LV  L++        AGNRGY+LQ CNAIRLQA +  P  FLRN+L SH  WR F   LR  T E    GLGF VP + R       +  + +G     +D  GIDHGS YAR+LGF DD+ W  D+
Sbjct:   37 KVLDVENPIVTATLVNVLNEDAACALFISYITRLPGNDHGILDGPRAASK---TSSPEVNGDGIDSERETVRVTXXXXXXXXXXMLLTNDDTSDALITFLPKKSALITKCIFPIFQLNARGNLRHGCRVIDHLLRLYLDDVYDVVGRNAATVERYMGAMLHHIEHAPVSEVFLTMVCKPH-----SAALMRFYTSSPQKKWAFFRSLSEWKLLLVLAQHVYSTEYSELHNIGAADVFVELLDRLAADENGELLLQPAAYIPELLDGLVNAAVDRSSGRTFGQRTAAMKCVFRLLQKSTAEKVQ--GPPTSPYQSFGGTIVNLVPNQLAPLRERIFELAETHIGKLLRYLVDKYEDQQTIEMDLASGKPLPDG--AVRHTGYVVKVPFTEFRLTLVEALVEVVAHNPSIMGEHFDNHVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTDNQATLEVLVKKQKLVTTLIEHFRHDGVGAGNRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRQFEPELRAITSEACVNGLGFHVPQMARQGGYLQKDSWQLLGTANDDDDESGIDHGSEYARSLGFIDDVAWPDDD 613          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: H3GH94_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH94_PHYRM)

HSP 1 Score: 367 bits (943), Expect = 1.820e-109
Identity = 221/599 (36.89%), Postives = 340/599 (56.76%), Query Frame = 1
Query:  166 LIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVR------KSPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVD--------QGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHEQLQT-------WLPKFCVAVSNCD--DKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQL-DALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSH-VDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVP--VVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGTRKKK 1875
            L+ R+L  + P ++  ++  LSVD    L+  FI+++  + +        K    A      +  E  D V+ EL  S+RATMLL N + +D   TFL  K++ LT  +  VF   AKG+L HAC V+D+LLR Y D+V+E LG+  E+++R++G +L + E++PV+E  + L+  P     +      Y ++ P KW  +  L++W+ LL +A+++   E  +++    AD+ +E++DRL++D+NG+LLLQP  YC EL++GL   AV+            + +RT + + +  + QK+    +      TS Y S   T V  VPN+L  +RE ++E ++        +L +  V+  N +  D+ SG+   E   AV H  Y V+ PFT LR  LV  + EIV  NP+ + +     +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL +++ K +LV  LV+ +  DGD ++ N+GY+LQ+CNAIRLQA +  P  FLRN+L SH  WR F   LR+ T      GLGF VP  + P Y  +  + + +    E VGIDHGS +AR+LGF DD+ W  D+     KK+
Sbjct:  381 LLLRVLAEETPTVSAPLVSALSVDATLALFAGFITRLDSDAKTLPDGPNFKKLATADTAAARREEETRDNVTPELLTSYRATMLLTNDDTADALLTFLGDKSKLLTRCIFPVFQRDAKGNLRHACRVIDHLLRFYLDDVYEVLGKDAETVQRYMGSLLPYLEHAPVAELFLTLVCKPHSAAVMR----FYASTPPKKWAFFRALSEWKVLLVLADHVCSVEFGETHTIGAADVFVELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVEPEGGKSKASQRTVGQRTAAMKCVFRLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLGPLREKIYELVEQHLGGLLKYLIQKYVSQQNIEMPDEESGKPLPEG--AVRHTAYVVKVPFTELRLTLVEALVEIVAHNPRLMSEHFDANVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVEHYRADGDTTS-NKGYILQICNAIRLQAASQSPEAFLRNFLQSHTTWRGFEQELRDQTTLFCVNGLGFTVPQAIRPGYQKDSWQMLSE----EQVGIDHGSEFARSLGFVDDVAWPEDDVADGNKKR 966          
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Match: A0A8K1FMV7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMV7_PYTOL)

HSP 1 Score: 362 bits (929), Expect = 3.320e-108
Identity = 216/587 (36.80%), Postives = 336/587 (57.24%), Query Frame = 1
Query:  190 DEPFMTEKMIQFLSVDGACELYVTFISQIG----EEDEVRKSPR-KASEGLLCKRP--EPGDE--VSEELKRSFRATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLE--RRTDSARTLLGITQKAADANIVFVNARTSMYDSHPTTTV--VPNRLSSVRELLHE--------QLQTWLPKFCVAVSNCDDKGSGRQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQL-DALPVELWKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQLVDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQPLPEDVGIDHGSAYARALGFEDDIVWLPDEPVGT---RKKK 1875
            D P +   M+  LS D A  +++++I+++     E + V   P  K   G + + P  + GD   ++ EL  S+RATMLL + E S+   TFLAKK + +   V  +F  +++G+L H C V+DYL+R + D+V++ +GRS   ++R++G ML++ E++PV+E  + ++  P     +      YQ +   KW+ +  L++W+ LL +AE+++    ++ +    AD+ +E++DRLS+D+NG +LLQP  YC EL++ L   AVD  L     +RT + + +L + Q++    +      TS Y S   T V  VPN+L+S+RE + E         LQ    K+    +   D  S +   ++  AV H  Y V+ PFT  R +LV  + E++  NP ++ D   V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N   L +++ K +LV  L++++ + + S+ N+GY+LQ CNAIRLQA +  P  FLR++L SH  WR F   LRE T     PGLGF VP   R     P+   Q     D GIDHGS +AR+LGF DD+ W PD+  G+   RKKK
Sbjct:  305 DPPTINPAMVNVLSEDAALGVFLSYITRLAGHNVEAEPVLDGPSDKPFAGDVVELPTSDRGDSATITPELLASYRATMLLTSDEASEALMTFLAKKTKVIVKCVFPIFQKNSRGNLRHGCRVIDYLMRLFVDDVYDVIGRSSSIVKRYMGSMLQYIEHAPVAELFLTMICKPHSATVMR----FYQATPQKKWQFFRSLSEWKILLVLAEHVYGTSYTEEHNIGAADVFVELLDRLSADENGAILLQPAAYCPELLENLIRTAVDNKLSRSAGQRTAAMKCVLRLLQRSMLEKVQ--GPPTSPYQSFGGTIVNLVPNQLASLREKIFELAEKDMAIMLQYMTEKYQDQQNIQMDLSSDKPLPDS--AVRHTAYVVKVPFTEFRLMLVDALVELIAHNPVKMHDHFDVNVWRVLVAWFFEYAHNNLYHAAFYQLVFIALRTDNKATLAILMKKLKLVTSLIENYRNEEVSSSNKGYILQCCNAIRLQAASQSPDAFLRSFLQSHTTWRGFEAELREQTNRFCVPGLGFTVPQHMRPGMYQPQDTWQTIESSDKGIDHGSEFARSLGFVDDVAW-PDDHTGSENGRKKK 882          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6346.17098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPN4_ECTSI0.000e+096.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z422_9STRA3.510e-11936.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6Y2H7_9STRA2.510e-11838.06Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A662YFK0_9STRA3.050e-11537.52Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
M4C5A3_HYAAE1.940e-11436.74Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VW11_9STRA1.570e-11337.40Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662Y9Z1_9STRA4.460e-11237.73Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
K3WQ60_GLOUD2.630e-11036.84Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GH94_PHYRM1.820e-10936.89Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1FMV7_PYTOL3.320e-10836.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6346contigEcto-sp13_S_contig6346:1618..7548 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1229.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LPN4
Model size2353
Hectar predicted targeting categoryother localisation
Exons12
EggNOG OGs2C50Y@1,2QTHY@2759
Cds size2013
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6346.17098.1prot_Ecto-sp13_S_contig6346.17098.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6346 1958..7548 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463879.1957443-UTR-Ecto-sp13_S_contig6346:1617..19571681463879.1957443-UTR-Ecto-sp13_S_contig6346:1617..1957Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6346 1618..1957 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463879.2067008-CDS-Ecto-sp13_S_contig6346:1957..21771681463879.2067008-CDS-Ecto-sp13_S_contig6346:1957..2177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 1958..2177 -
1681463879.2172205-CDS-Ecto-sp13_S_contig6346:2435..25211681463879.2172205-CDS-Ecto-sp13_S_contig6346:2435..2521Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 2436..2521 -
1681463879.446944-CDS-Ecto-sp13_S_contig6346:2988..31681681463879.446944-CDS-Ecto-sp13_S_contig6346:2988..3168Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 2989..3168 -
1681463879.4585242-CDS-Ecto-sp13_S_contig6346:3335..36641681463879.4585242-CDS-Ecto-sp13_S_contig6346:3335..3664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 3336..3664 -
1681463879.469637-CDS-Ecto-sp13_S_contig6346:3960..40991681463879.469637-CDS-Ecto-sp13_S_contig6346:3960..4099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 3961..4099 -
1681463879.480712-CDS-Ecto-sp13_S_contig6346:4254..44581681463879.480712-CDS-Ecto-sp13_S_contig6346:4254..4458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 4255..4458 -
1681463879.492052-CDS-Ecto-sp13_S_contig6346:4611..47461681463879.492052-CDS-Ecto-sp13_S_contig6346:4611..4746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 4612..4746 -
1681463879.5115976-CDS-Ecto-sp13_S_contig6346:4881..50401681463879.5115976-CDS-Ecto-sp13_S_contig6346:4881..5040Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 4882..5040 -
1681463879.523065-CDS-Ecto-sp13_S_contig6346:5184..53591681463879.523065-CDS-Ecto-sp13_S_contig6346:5184..5359Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 5185..5359 -
1681463879.536556-CDS-Ecto-sp13_S_contig6346:6027..62001681463879.536556-CDS-Ecto-sp13_S_contig6346:6027..6200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 6028..6200 -
1681463879.548544-CDS-Ecto-sp13_S_contig6346:6775..68981681463879.548544-CDS-Ecto-sp13_S_contig6346:6775..6898Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 6776..6898 -
1681463879.5577977-CDS-Ecto-sp13_S_contig6346:7458..75481681463879.5577977-CDS-Ecto-sp13_S_contig6346:7458..7548Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6346 7459..7548 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6346.17098.1

>prot_Ecto-sp13_S_contig6346.17098.1 ID=prot_Ecto-sp13_S_contig6346.17098.1|Name=mRNA_Ecto-sp13_S_contig6346.17098.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=671bp
MELQPNGMVSAVAYVNGGAKMDSDARDAIQEQADAAPIAVRGSDALLEKR
RADKILIARMLDMDEPFMTEKMIQFLSVDGACELYVTFISQIGEEDEVRK
SPRKASEGLLCKRPEPGDEVSEELKRSFRATMLLANSEPSDNHRTFLAKK
ARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLE
RHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVAGAAATYQTSAPSKWRLY
SGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLL
QPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVN
ARTSMYDSHPTTTVVPNRLSSVRELLHEQLQTWLPKFCVAVSNCDDKGSG
RQAEETSEAVAHPGYEVERPFTMLRYVLVGIVYEIVNRNPQQLDALPVEL
WKVLCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVISKGRLVAQL
VDSHVDGDKSAGNRGYVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNF
LGSLREATLEQQRPGLGFEVPVVPRYYANGPETMGQQPLPEDVGIDHGSA
YARALGFEDDIVWLPDEPVGTRKKKKKKKKKKKKTGGAAGEARSADDEGD
HEKHDGNVCDADDASDAEGL*
back to top

mRNA from alignment at Ecto-sp13_S_contig6346:1618..7548-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6346.17098.1 ID=mRNA_Ecto-sp13_S_contig6346.17098.1|Name=mRNA_Ecto-sp13_S_contig6346.17098.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5931bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6346:1618..7548- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCTTCAGCCGAATGGTATGGTATCAGCTGTTGCGTACGTGAATGG TGGGGCTAAGATGGACAGCGACGCTCGCGACGCCATTCAGGTGAGACAGC CGGAAAGTGGGTTCTACATATCGAGTACAGGGCGAGCGCTCTCTCTTGCC AAGCAACAGCAGCGATAAGTTGCATTTTCGCAGTTGCCTCTGGTAGGAGT GAGTCTAAGAGCATTACTCTGCGGTGGGGAACTTGTCTATATGCAGACGA AACCAAACCTAGTCACAGCAGGTACACAGCAACAGAGTATTTTTTTGTTC CCCCTGCGCGAGACCTCGAGTCGGCGCCAGAGATTGGCCGGGCAACCTTA CTGGAACCTTGATGAAGATGGGTCGCAGGAACACTTGAAAGACTGGTGCT GAATAATTGTCCATCCCTGTACTGCCAAGCCCGTGGCAGTCTCACCAAAT AGTTTGCGTGTAGAGCGTTGACGCCTTGCGGTTCTCCTGCTCGTGTGTTG TTCGAGTGCATAATCGTGATTGTCGAAGAATGTATAATTTCGTGCCCTGC TGGTACTACAGCAGTCCCGTCACCTACTTGCTATTGCTGTCTTGCATCTC GCCCGCGCTCCCTTGCCCACCTGTTCCAACCGAATGTCTCCTTCGTCAAG GAGCAGGCAGACGCTGCGCCTATTGCGGTGCGTGGGTCAGATGCACTCTT GGAGAAACGACGAGCAGACAAAATTCTCATTGCGCGCATGCTGGATATGG ACGAGCCTTTCATGACTGAGAAGGTATCGTGACAGCAAGCGGAGATACTG CTTTGTACTCCGTGAAAACGGTTCTAGATAACACCGTCCGTGGTGCTCCC CCACACACCTCCCGGCGTCCCATGACCAATTGGCTCTAGCTGCTACGCTG CCGGCATGATTTGACATCGTGGTAGGTGATTGCTGCGTCCGCGGGTTTCT TGACATGTCTCGAGCCTTCTTGGACGTCGAGTAGTTAACGGCTTGATGCG TGAATGCGACAAGCGCTCTCTTAGAAATAAGGGACATGATTGTGTATCCA TGATAAGAAATATCCTCGTTTCTGCGGCAATCAACCAGAGGAGTGTCAAC AAGAGCAAGTTGTGGCCTCTTGCGTGTGCGCTGTAGTACGTTGCGGTAAC GGAATGCACGGGTTTTTTCGCAGGAATTGTTCCCGCACCTCGCGTATCGA TTCACCGTCCAATAAAGATAGCCCGCAAATCGTAGGTACTGCTGTAGACG AGATTTGTCATGCTGCTCAAAGGTCCTACATTCCGTTTCACACAACCCTG TGCGCCGCCTGATACTGTACGTTACATTCCGTACGGTGCTTTCTCCAGAT GATCCAGTTTTTGTCAGTTGATGGAGCCTGCGAGTTGTACGTTACTTTCA TTTCGCAAATCGGCGAGGAGGACGAGGTACGGAAAAGCCCGCGTAAAGCC TCCGAGGGGTTGTTGTGTAAGCGACCGGAGCCTGGAGATGAGGTTTCTGA GGAGCTGAAGCGGTCGTTCCGGTGAGGTGCTATCTGACGTTCTCTTTGCA GCACGACGGTGCGTATCGTCCGAACAGTGATGCCGGTCGGTGTATGTGCG TGTAACTTGTGGAATGAAAACTCTCATGTATTGACATTCCAGTTCACATG CAGCACTACATTGTGACACTTGCGCCTACTTATGCACACGACATTCGGTG AGTAATCGTTGCGCCCGTTTGATTTGTAACCTTTACATCGTCACAACATC ACAACCCGCTGGTGCAGAATATGAAGCTGAATCATTCATCCTCCGAGAAT GATCACTATATTGGACAGATTGTAGTGGGTTTTGCATCGATCACGCTGAT TTTCTTCTTCTTCACGAGAGGCTAGTCGGGAATGGCGTGCATGATGACCT ACTGACCCAATAAGCAGAAAGGACGTCGACAAAATGATGTCTGTGCATTT CTGTGTGGTTGGTGGCGGCTCATGCAGATTGTTTGTTCTCAACTCGTAAG TGTATGCGGCAAGACGCAGCGTTGTTCCAGCAGAAACAGACGGTTGCAAG ACTGCGTAGGCGAGGACATTGAGTGCGTCAGATTCGGCAGGGTAGAGGAG CCAAAACCAGCATTACTGGCGACCGGCGTCAACAGATATTGTACTGCAGT GTCTTATGTATCCCAACTTTTTCAATCGTCTGCTGTCAGGGCTACAATGC TGCTGGCAAACAGCGAACCTTCAGATAATCACAGGACATTCCTGGCAAAG AAGGCACGAGAGTTAACAGCTGCTGTTCTCAAGGTCTTTTGGCCGAGTGC GAAAGGGAGCTTGCACCACGCATGTTGCGTGCTGGATTACCTGCTGAGGT CGTATGCAGACGAGGTACGCATTGAAGGAGGCTTCAGTTTCGCACCCGGT GTAACTTGCTTAGGCCTTTCCCATGCGGCCTTGCTAATACACCACGTATG CGGGAAGGTTGACATCGAACTGCAACCGCGACGCCGTTCCTTTTTCATGA TGCTGCAGGTCTTCGAGACATTGGGGCGATCTCGCGAATCGCTGGAACGA CATCTAGGACCCATGCTTCGATGGGCAGAGTACTCGCCTGTTTCTGAAAC CATGGTCAAACTACTCACCTTTCCATCGGTGGGAGGCGCGGTGGCAGGCG CAGCTGCTACCTACCAGGTAGATGCTGCTGTGTTTCGGCGAAATGCTAAC AACTCTCGCGTTCGCCTTGTTAGTGTGAAATTCAGTAGCTGTTACCTTTG GAGTCATGACCTGATACGTATCATACGTTTCCGCGCACCGGCTTACTCGC AGACATCGGCACCAAGCAAGTGGCGGTTGTATTCTGGTCTTGCAGACTGG CGGTTTCTTCTGCGGGTTGCGGAGAACATCTTCGATCGAGAGTGCTCCGA TTCATACGCCTCGGCGTGTGCGGACCTTCTCCTCGAGGTATGCGCGCCTG CCTAGGCGCTTGGCCGGTTTTGCGATGCATGTATGCATAGTCGAAATCTA GTGTTCGTGCCTGCTCGGTTAGCGATGACGGAATGCTTCTAGCCTCGTGT ATGGTAAACATCACTGCCATTCGCATCAATTTGCCCTTAGGTGGTGGATC GACTGTCGTCCGACGACAATGGGGAGTTGCTGCTTCAACCCATTGGGTAC TGCAAGGAACTGGTTGACGGGCTGGCAGCCATGGCGGTTGACCAAGGTCT TCCACTAGAGCGGCGGACAGATAGCGCACGGACTCTGCTGGGAATAACGC AAAAGGCAGCCGACGCGAATATCGTCTTCGTCAACGCACGCACGGTGCGT GCGGTTGCCTGCCATGGCCAGCTCTCCTCCGGCCCCAAAAGTAGCTAGCC ATGTGTGAGCAACCTGGATAGTGATTCGGGCCTAATGAAATGAGCGTGTT TGCTTACTTCGCGTTCTGCCATCGCGCGTGTGTTCTTCCCGTCGTTCAGT CAATGTATGACTCGCACCCAACAACTACTGTGGTTCCAAATCGACTGAGC TCCGTGCGAGAGCTACTTCATGAGCAGCTACAAACCTGGTTGCCGAAGTT TTGCGTCGCAGTCTCCAACTGCGATGACAAGGGTTCAGGTACGCCACCCG TGGACTTTTTGGGACAGGAGTGGATACTGGCTGGTATCAAAGCTCCTGTA TTTGATGGAATTCATATCCAAATTTGCAGGCGTGTGTTTTGCATGCAAAG GCGTGGTATGTGATAGACGTATTTTCGGCCTTGAAACCACCTCTCTTTGT GACACCACTACTGTATGTCACATCTTTGCAGCCCTTATTGTAACCTTGCC AGCACGAGGTTGCCCCATGTCATCGTTCCCGCCCATCCAGTATCCCGAAC CAACTCTCCTTGTGCCGCAACCGGCTGCCTTCAGGCAGGCAAGCGGAAGA GACTTCGGAAGCAGTGGCACATCCAGGGTATGAAGTGGAGCGCCCGTTCA CAATGCTTCGTTACGTCCTGGTCGGTATTGTATATGAGATCGTGAATCGA AATCCTCAGCAGCTGGATGCCCTGCCAGTGGAGCTATGGAAGGTGTTGTG CAGCTGGTTCTTCCGATATCCCCATAACAACCTGTACCACAGCATCTTCT ACAAGCTTGTTTTCAAGGTGCTGAGATGCAACAACGTTGGCGCGTTACGG ATGGTGATATCGAAGGGGCGACTGGTGGCACAACTCGTGGACTCTCACGT AGACGGCGATAAGGTGAGTTGAGCCCATTCCGTCAGATATGAGTGCATAC GGGCAGTTCGCGCTGTGTATGGCATGCCTTCTACGTTTCCAGTGCAGACA AGCGATTCTTGCGAGCAGCAGTACAGCGATGCGGTCAGACTCATCATCCC TCACTTGGATCCCTCATGTTTCCCGCGCAGAGTGCTGGTAACAGGGGTTA TGTGTTGCAGCTCTGCAACGCCATTCGCCTCCAGGCAGATACAATGCCCC CGACAGAGTTCCTTCGGAACTACCTCAACTCCCATGAGCAGTGGCGCAAT TTCTTGGGAAGTCTCCGGGAGGCTACGCTTGAGCAGCAAAGGCCTGGATT GGGCTTTGAGGTCAGTATTCTTGATGTGCTGGTAATCACGGATTTTCGTA GCCGCACGTCTAGTGACCGGGAAAGCGCTTTTCAACAACAGCAGTCTTGG AGAACGGTACGCATCGTCAGTGAGGGCAAACCAATAATTTCGGTCGTGGA AAAGCCCAGAACGCGCCACCAAGTACTACCTTGGAGTTGAGAACCTGGGG TCTCAATATAGGATAACTTCACCATAGCTTAGTTAAGAACCTCGTGCTAT GACCAATAGTCGCTGTTGTGTTACCCACGGAGGAACGAAGAATCGGAGCC TGTCTCAAAAAGCGATTAGCTGAAGGGTATGTTCCTCATAAATACTCTGG CGCTATTCTTCAAGAACTTGTGGTATGTACCCTTCCAATCATACACATGC TTGAAATTATCATGATATTTACATCCAGTATATTATTTACGGTAGTTGTC AAAATTTTGTGTTCTGGATGATGGCAGGTGCCCGTGGTGCCTCGGTATTA CGCAAACGGGCCAGAGACTATGGGACAACAGCCGCTCCCAGAGGACGTAG GAATCGACCATGGGTAAGCCCGTTGAGACTTGACGACTCTCGTCGCGTAG GTTTCAGTTCATAATGAAATCTTGCACAGGACAAGGTATCAATAGCGCTC TAGGGATTAGTCTAGTATCTCTTTCGCGTGTGCAGAGATTAGATGGAAAG TATGAAGAGGAAGCGACCTGTGGTAAAGTCCACACGCGAAGCTTTTGAGG GACCCTTGTGTGATCTGATTTGTAAGAGCTGCGTGTTGCCTCACGTGCTT CGTTCCGCATATTCTCACCAGATCCGCCTACGCTAGAGCGCTCGGCTTTG AAGACGACATTGTGTGGTTACCTGATGAGCCTGTGGGAACTCGCAAAAAG AAGAAGAAAAAGAAGAAGAAGAAGAAGAAGACGGGTGGGGCTGCGGGCGA GGCACGATCAGCGGACGACGAGGGGGACCACGAAAAACATGACGGCAATG TTTGTGATGCCGATGACGCATCAGACGCTGAGGGTTTGTAAATTTGTGCT TCGCCCACAAGCAGGAGCTGGGCGTTGAGTCCTAGCAAATTTGTACTGTA GGTGTTTTTACGCGCCCGATATGCTCCCCGAGCTATCCATTGCGCTGTCT CCTCAGGGCAACCTGAAGAATAGATCTAGAGTAAAAAATCCACCATCGTT GCAAACAGGGAAATCTGGTCACACTTGTCTTGCGCTTGCGCGAAGACTCT TTTGTTGTCAGCCTCATGCACTTCGACGTGCAGCAGTGTCTCAGAGTTGA AGTCTTGTTAAACGTGATGGAGCTAGGAGTCTGGGCGTTGCGATGAGCGA CGAGCCAAGAAACAACCCCACGGGCTGCATA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6346:1618..7548-

>mRNA_Ecto-sp13_S_contig6346.17098.1 ID=mRNA_Ecto-sp13_S_contig6346.17098.1|Name=mRNA_Ecto-sp13_S_contig6346.17098.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2013bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6346:1618..7548- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCTTCAGCCGAATGGTATGGTATCAGCTGTTGCGTACGTGAATGG
TGGGGCTAAGATGGACAGCGACGCTCGCGACGCCATTCAGGAGCAGGCAG
ACGCTGCGCCTATTGCGGTGCGTGGGTCAGATGCACTCTTGGAGAAACGA
CGAGCAGACAAAATTCTCATTGCGCGCATGCTGGATATGGACGAGCCTTT
CATGACTGAGAAGATGATCCAGTTTTTGTCAGTTGATGGAGCCTGCGAGT
TGTACGTTACTTTCATTTCGCAAATCGGCGAGGAGGACGAGGTACGGAAA
AGCCCGCGTAAAGCCTCCGAGGGGTTGTTGTGTAAGCGACCGGAGCCTGG
AGATGAGGTTTCTGAGGAGCTGAAGCGGTCGTTCCGGGCTACAATGCTGC
TGGCAAACAGCGAACCTTCAGATAATCACAGGACATTCCTGGCAAAGAAG
GCACGAGAGTTAACAGCTGCTGTTCTCAAGGTCTTTTGGCCGAGTGCGAA
AGGGAGCTTGCACCACGCATGTTGCGTGCTGGATTACCTGCTGAGGTCGT
ATGCAGACGAGGTCTTCGAGACATTGGGGCGATCTCGCGAATCGCTGGAA
CGACATCTAGGACCCATGCTTCGATGGGCAGAGTACTCGCCTGTTTCTGA
AACCATGGTCAAACTACTCACCTTTCCATCGGTGGGAGGCGCGGTGGCAG
GCGCAGCTGCTACCTACCAGACATCGGCACCAAGCAAGTGGCGGTTGTAT
TCTGGTCTTGCAGACTGGCGGTTTCTTCTGCGGGTTGCGGAGAACATCTT
CGATCGAGAGTGCTCCGATTCATACGCCTCGGCGTGTGCGGACCTTCTCC
TCGAGGTGGTGGATCGACTGTCGTCCGACGACAATGGGGAGTTGCTGCTT
CAACCCATTGGGTACTGCAAGGAACTGGTTGACGGGCTGGCAGCCATGGC
GGTTGACCAAGGTCTTCCACTAGAGCGGCGGACAGATAGCGCACGGACTC
TGCTGGGAATAACGCAAAAGGCAGCCGACGCGAATATCGTCTTCGTCAAC
GCACGCACGTCAATGTATGACTCGCACCCAACAACTACTGTGGTTCCAAA
TCGACTGAGCTCCGTGCGAGAGCTACTTCATGAGCAGCTACAAACCTGGT
TGCCGAAGTTTTGCGTCGCAGTCTCCAACTGCGATGACAAGGGTTCAGGC
AGGCAAGCGGAAGAGACTTCGGAAGCAGTGGCACATCCAGGGTATGAAGT
GGAGCGCCCGTTCACAATGCTTCGTTACGTCCTGGTCGGTATTGTATATG
AGATCGTGAATCGAAATCCTCAGCAGCTGGATGCCCTGCCAGTGGAGCTA
TGGAAGGTGTTGTGCAGCTGGTTCTTCCGATATCCCCATAACAACCTGTA
CCACAGCATCTTCTACAAGCTTGTTTTCAAGGTGCTGAGATGCAACAACG
TTGGCGCGTTACGGATGGTGATATCGAAGGGGCGACTGGTGGCACAACTC
GTGGACTCTCACGTAGACGGCGATAAGAGTGCTGGTAACAGGGGTTATGT
GTTGCAGCTCTGCAACGCCATTCGCCTCCAGGCAGATACAATGCCCCCGA
CAGAGTTCCTTCGGAACTACCTCAACTCCCATGAGCAGTGGCGCAATTTC
TTGGGAAGTCTCCGGGAGGCTACGCTTGAGCAGCAAAGGCCTGGATTGGG
CTTTGAGGTGCCCGTGGTGCCTCGGTATTACGCAAACGGGCCAGAGACTA
TGGGACAACAGCCGCTCCCAGAGGACGTAGGAATCGACCATGGATCCGCC
TACGCTAGAGCGCTCGGCTTTGAAGACGACATTGTGTGGTTACCTGATGA
GCCTGTGGGAACTCGCAAAAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGA
AGACGGGTGGGGCTGCGGGCGAGGCACGATCAGCGGACGACGAGGGGGAC
CACGAAAAACATGACGGCAATGTTTGTGATGCCGATGACGCATCAGACGC
TGAGGGTTTGTAA
back to top