prot_Ecto-sp13_S_contig6341.17092.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6341.17092.1
Unique Nameprot_Ecto-sp13_S_contig6341.17092.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length477
Homology
BLAST of mRNA_Ecto-sp13_S_contig6341.17092.1 vs. uniprot
Match: D8LD93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD93_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 4.780e-160
Identity = 329/479 (68.68%), Postives = 336/479 (70.15%), Query Frame = 0
Query:    1 MLTRKQQWRRVRGPRSSVETHQLAGRGGGKTCQRAAGVPCAPAHPRAINSLSIDDSL-RLVATGRPATSDEGDEPTAAAXXXXXXXXAVPSSSVRPPRVDERDAICVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMRETAAAKVENKANQERPSDQGTPSVSEIQDTAVAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADDLLPPLPRSPPSPLFSATLTTPLPPSRGAAGAAPPCAVKVSNIFPTAGGPAEGQEDGGGYDGGLLRPAAPGVVLVATSIPPEALTLASAATVREXXXXXXXXXXXXXXXXXRR-GRKKEGTSLLPSPGSFSSSRDSWRLVAPAVQELRRAERVKRAADFNWAPIAGPSTVAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GCDDSEEESGHVCGRDGECRGATKTITKPPQQPGCGPDLFFRDERTVCMA 476
            MLTRKQQWRRVRGPRSSVETHQLA RGG KTC RAA VP A AHPRAINSLSIDDSL RLVATGRPA SDE        XXXXXXX AVPSSSVR P VDE  AI VGSNVRFNHQVRVVLVPSRKELRPL+EELWWGTNDYVEFRREFVQAMRE AAA+VEN+ANQE      TPSV EIQDT                                                                               VSNIFPT GGPAEGQEDGG  DGGLLRPAAPGVVLVATSIPPEALTLAS      XXXXXXXXXXXXXXXXX   GRKKEGTSLLPSPGSFSSSRDSWRLVAPAVQELRRAERVKRAADFNWAPIAGPST A   XXXXXXXXXXXXXXXXXX             GCDDS+EESGH CG+D ECRGA KT+T+ PQQPGCGPDLF RDERTVCMA
Sbjct:    1 MLTRKQQWRRVRGPRSSVETHQLADRGGRKTCPRAARVPDALAHPRAINSLSIDDSLLRLVATGRPAASDE------EXXXXXXXXPAVPSSSVRRPVVDEIGAIRVGSNVRFNHQVRVVLVPSRKELRPLIEELWWGTNDYVEFRREFVQAMREAAAAEVENRANQE------TPSVPEIQDT-------------------------------------------------------------------------------VSNIFPTVGGPAEGQEDGGDCDGGLLRPAAPGVVLVATSIPPEALTLASXXXXXXXXXXXXXXXXXXXXXXXXXXGRKKEGTSLLPSPGSFSSSRDSWRLVAPAVQELRRAERVKRAADFNWAPIAGPSTAAXXXXXXXXXXXXXXXXXXXXXGYRTHSLSSASEEGCDDSDEESGHGCGKDEECRGAAKTMTRSPQQPGCGPDLFSRDERTVCMA 388          
BLAST of mRNA_Ecto-sp13_S_contig6341.17092.1 vs. uniprot
Match: A0A6H5KW42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW42_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 1.540e-145
Identity = 325/490 (66.33%), Postives = 335/490 (68.37%), Query Frame = 0
Query:    1 MLTRKQQWRRVRGPRSSVETHQLAGRGGGKTCQRAAGVPCAPAHPRAINSLSIDDSL-RLVATGRPATSDEGDEPTAAAXXXXXXXXAVPSSSVRPPRVDERDAICVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMRETAAAKVENKANQERPSDQGTPSVSEIQDTAVAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADDLLPPLPRSPPSPLFSATLTTPLPPSRGAAGA-APPCAVKVSNIFPTAGGPAEGQEDGGGYDGGLLRPAAPGVVLVATSIPPEALTLASAATVREXXXXXXXXXXXXXXXXXRRGRKKEGTSLLPSPGSFSSSRDSWRLVAPAVQELRRAERVKRA------------ADFNWAPIAGPSTVAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCDDSEEESGHVCGRDGECRGATKTITKPPQQPGCGPDLFFRDERTVCMA 476
            MLTRKQQWRRVRGPRSSVETHQLA RGGG+TCQR AG P APAHPRAINSLSIDDSL RL ATGRPA SD         XXXXXXX AVPSSSVRPP+VD+ DA CVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMRE AA KVENKANQE PSD    S SEIQDTAVAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    AP CAVKVSN+FPTAGGPAEGQEDGGG DG                                XXXXXXXXXXXXXXXXX  GRKKEGTSLLPSPGSFSS RDSWRLVAP VQELRRAERV               AD +WAPIAGPST AA+                               G D+S+EESG+ CGRD ECRGA KTITKPPQQPGCGP+LF RDERTVCMA
Sbjct:    1 MLTRKQQWRRVRGPRSSVETHQLADRGGGQTCQRVAGAPGAPAHPRAINSLSIDDSLLRLAATGRPAASDXXXXXXXXXXXXXXXXPAVPSSSVRPPKVDKSDAFCVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMREAAATKVENKANQETPSDXXXXSASEIQDTAVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPACAVKVSNMFPTAGGPAEGQEDGGGCDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKKEGTSLLPSPGSFSSPRDSWRLVAPVVQELRRAERVXXXXXXXXXXXXXXXADLSWAPIAGPSTAAAQ------------DEEEDGGYRTHSLSSASEEGRDNSDEESGYGCGRDEECRGAAKTITKPPQQPGCGPNLFSRDERTVCMA 478          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6341.17092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD93_ECTSI4.780e-16068.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW42_9PHAE1.540e-14566.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6341contigEcto-sp13_S_contig6341:1191..6086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6341.17092.1mRNA_Ecto-sp13_S_contig6341.17092.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6341 1191..6086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6341.17092.1 ID=prot_Ecto-sp13_S_contig6341.17092.1|Name=mRNA_Ecto-sp13_S_contig6341.17092.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=477bp
MLTRKQQWRRVRGPRSSVETHQLAGRGGGKTCQRAAGVPCAPAHPRAINS
LSIDDSLRLVATGRPATSDEGDEPTAAATAAAAAAPAVPSSSVRPPRVDE
RDAICVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQ
AMRETAAAKVENKANQERPSDQGTPSVSEIQDTAVAAATTASEATESTAT
TSSPPASGARGSSGSSSSSGVADDLLPPLPRSPPSPLFSATLTTPLPPSR
GAAGAAPPCAVKVSNIFPTAGGPAEGQEDGGGYDGGLLRPAAPGVVLVAT
SIPPEALTLASAATVREPPATAERRRKNSTADGGRRGRKKEGTSLLPSPG
SFSSSRDSWRLVAPAVQELRRAERVKRAADFNWAPIAGPSTVAAKAAAAA
VAAAAAQDEEEDGGYRTNSLSSASEEGCDDSEEESGHVCGRDGECRGATK
TITKPPQQPGCGPDLFFRDERTVCMA*
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