prot_Ecto-sp13_S_contig634.17089.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig634.17089.1
Unique Name	prot_Ecto-sp13_S_contig634.17089.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	462

Homology

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BLAST of mRNA_Ecto-sp13_S_contig634.17089.1 vs. uniprot
Match: A0A6H5KTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK9_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 1.700e-200
Identity = 418/461 (90.67%), Postives = 423/461 (91.76%), Query Frame = 0

Query:    1 MITRRSVVASAAALIPFLLLAADALLHPTRLTTPAKPAGSNKPGAAPVQHCSTLPQQYLCFRRTSNHRGDISSRRSSSSXSSTLSPRSRSARLEDALSSTTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXXXXXAKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDVGGGRAKRYRSANPDDPRTASSSSAYGNDADGNKSGVTVAGAXXXXXXXXPVGAAIGAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKXXRKAAEAXXXXXXXXXXXXXXXXXXXXVRSQVKRSVENLEERRKADDNSGGAPKDGL 461
            MITRRSVVAS AALIPFLLLAADALLHPTRLTTPAKPAGSNKPGAAPV  CSTLPQQY CFRRTS +RGDISSR SSS X     PRSRS+RLEDALS TTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXX   AKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDD GGGRAKRYRSANPDDPRTASSSSAYGN+ DGNKSG TVA  XXXXXXXX VGAAIGA+AARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE XX  AAEAXXXXXXX             VRSQVKRSVENLEERRKADDN+GGAPKDGL
Sbjct:    1 MITRRSVVASTAALIPFLLLAADALLHPTRLTTPAKPAGSNKPGAAPVPQCSTLPQQYFCFRRTSKYRGDISSRCSSSXXXXXXXPRSRSSRLEDALSYTTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXX---AKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDFGGGRAKRYRSANPDDPRTASSSSAYGNNVDGNKSGATVAXXXXXXXXXXXVGAAIGAIAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXAAEAXXXXXXXHRIRERAINAFRRVRSQVKRSVENLEERRKADDNNGGAPKDGL 458

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BLAST of mRNA_Ecto-sp13_S_contig634.17089.1 vs. uniprot
Match: D7G4B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B6_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 6.090e-140
Identity = 334/360 (92.78%), Postives = 337/360 (93.61%), Query Frame = 0

Query:  103 MSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXXXXX-AKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDVGGGRAKRYRSANPDDPRTASSSSAYGNDADGNKSGVTVAGAXXXXXXXXPVGAAIGAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKXXRKAAEAXXXXXXXXXXXXXXXXXXXXVRSQVKRSVENLEERRKADDNSGGAPKDGL 461
            MSLAAEGLDVWVVSDDGRT   XXXXXXXXXXXXXX  KLLSIQASYVE GTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSP VFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDD GGGRAKRYRSANPDDPRTASSSSAYGND DGNKSG TVAG XXXXXXXXPVGAAIGAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+XX  A   XXXXXXXXXXXXXXXXXXX VRS+VKRSVEN EERRK DD +GGAPKDGL
Sbjct:    1 MSLAAEGLDVWVVSDDGRTAATXXXXXXXXXXXXXXXTKLLSIQASYVELGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPAVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDFGGGRAKRYRSANPDDPRTASSSSAYGNDVDGNKSGATVAGXXXXXXXXXPVGAAIGAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKATEQXXXXAXXXXXXXXXXXXXXXXXXXXXXRVRSKVKRSVENFEERRKPDDKNGGAPKDGL 360

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BLAST of mRNA_Ecto-sp13_S_contig634.17089.1 vs. uniprot
Match: A0A835ZJG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJG0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.540e-10
Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 0

Query:  144 IQASYVEP------GTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDVGGGRAKRYRSANPD 259
            +Q  Y +P       +  RRTW+  RS+  F AL   ++  LA   A   +  P P   +  + E YL +L+      + P LY FL APPD+V+EPVL GEVVD+D    R  R RSA+PD
Sbjct:  218 LQPRYPKPRRACVLASSRRRTWSVVRSDAQFAALSDAILAALAAGTAPPPLRYPGPAAGADAL-ERYLAQLLRSGAALASPDLYAFLAAPPDVVEEPVLIGEVVDEDSWTDR--RVRSADPD 336

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig634.17089.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig634.17089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KTK9_9PHAE	1.700e-200	90.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4B6_ECTSI	6.090e-140	92.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZJG0_9STRA	1.540e-10	39.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 398..418
None	No IPR available	COILS	Coil	Coil	coord: 326..346
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..461
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.716
None	No IPR available	TMHMM	TMhelix		coord: 7..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig634	contig	Ecto-sp13_S_contig634:5863..10759 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig634.17089.1	mRNA_Ecto-sp13_S_contig634.17089.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig634 5863..10759 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig634.17089.1 ID=prot_Ecto-sp13_S_contig634.17089.1|Name=mRNA_Ecto-sp13_S_contig634.17089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=462bp
MITRRSVVASAAALIPFLLLAADALLHPTRLTTPAKPAGSNKPGAAPVQH
CSTLPQQYLCFRRTSNHRGDISSRRSSSSSSSTLSPRSRSARLEDALSST
TRMSLAAEGLDVWVVSDDGRTTTTYRGSSASSGGGGGGAKLLSIQASYVE
PGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVV
FEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDVGGGRA
KRYRSANPDDPRTASSSSAYGNDADGNKSGVTVAGAVVGGLVAGPVGAAI
GAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELSRKAKTAA
GKAKQAVQKVDTDYSVRQRAKEAAKRTVRAAQKKTKDLRVTERATEAAKA
TEKAARKAAEAARKADKEHRIRERATNAFRRVRSQVKRSVENLEERRKAD
DNSGGAPKDGL*