prot_Ecto-sp13_S_contig634.17088.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig634.17088.1
Unique Nameprot_Ecto-sp13_S_contig634.17088.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length115
Homology
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BLAST of mRNA_Ecto-sp13_S_contig634.17088.1 vs. uniprot
Match: D7G4B5_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B5_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.100e-34
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0 
Query:    1 MHRVYRGVEESSEVDGIVKEEMWTDGIRGAETREGESAMXXXXXXXSCTLNGCTRKPTHGAKGKKAEFCMSHTFAGLVNVT 81
            MHR++RG EESSEVDG VKEEMWTDGIRGAETR+GE A+       SC L+GCTRKPTHG KGKKA FC+SH  AG VNVT
Sbjct:    1 MHRLFRGAEESSEVDGNVKEEMWTDGIRGAETRKGEQALGGSPLGESCPLDGCTRKPTHGVKGKKAVFCVSHIIAGSVNVT 81
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BLAST of mRNA_Ecto-sp13_S_contig634.17088.1 vs. uniprot
Match: D7G4X8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X8_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.120e-21
Identity = 53/83 (63.86%), Postives = 58/83 (69.88%), Query Frame = 0 
Query:    1 MHRVYRGVEESSEVDGIVKEEMWTDGIRGAET-REGESAMXXXXXXXS-CTLNGCTRKPTHGAKGKKAEFCMSHTFAGLVNVT 81
            MHR+YRG  ESSE  G+VKEEMW+D IR AE  REGE AM       S CTL GCTRKPTHG  GKKAEFC  H+ A  VNV+
Sbjct:    1 MHRLYRGGGESSEFGGVVKEEMWSDDIREAEDEREGELAMSDSHVGGSSCTLYGCTRKPTHGVAGKKAEFCARHSLATSVNVS 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig634.17088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4B5_ECTSI2.100e-3472.84EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G4X8_ECTSI1.120e-2163.86EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig634contigEcto-sp13_S_contig634:4052..4396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig634.17088.1mRNA_Ecto-sp13_S_contig634.17088.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig634 3938..4396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig634.17088.1 ID=prot_Ecto-sp13_S_contig634.17088.1|Name=mRNA_Ecto-sp13_S_contig634.17088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp
MHRVYRGVEESSEVDGIVKEEMWTDGIRGAETREGESAMGDSPLGESCTL
NGCTRKPTHGAKGKKAEFCMSHTFAGLVNVTWSAPLTVVSRMRSSAWRAA
RRGSFVRNMRQAAW*
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