mRNA_Ecto-sp13_S_contig12.1707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12.1707.1
Unique NamemRNA_Ecto-sp13_S_contig12.1707.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: D8LP49_ECTSI (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP49_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 5.580e-160
Identity = 246/340 (72.35%), Postives = 280/340 (82.35%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEAIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            LIE++D +TIR DK TK+GSV+D I+MVL CDSS ANT+  RLLQ +P LGS        R  R K+NGKGN TPVADAKTLIEIVWLLPGKKAH+FRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTE+GR TQEFLL GREEA+ETFDGMPAGFKYL+E DRAQ AK+M +Q+LK G+Q       ALKRKRVDDLV SYRA+QD+GV LDGRTLIELRD+VTILSRQ+ V ++AVAVA  +L DS T THEL + QRGKETGIVVVSSKIGIRVPQN+ G VGKLM++ YI+KY L  ++NAF KR TL NGRP++E   F RDEDIIE+AIR VM
Sbjct:    3 LIESMDGATIRADKQTKKGSVMDTIRMVLRCDSSNANTAFGRLLQAHPELGS--------RCTRSKLNGKGNETPVADAKTLIEIVWLLPGKKAHSFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRETQEFLLHGREEAVETFDGMPAGFKYLSETDRAQVAKRMIDQQLKAGDQ-------ALKRKRVDDLVHSYRAIQDIGVRLDGRTLIELRDSVTILSRQNTVEDDAVAVATPLLQDSNTSTHELASAQRGKETGIVVVSSKIGIRVPQNLCGKVGKLMRQLYIKKYALPGNWNAFVKRQTLINGRPVMENCFFSRDEDIIEQAIREVM 327          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 1.260e-159
Identity = 265/340 (77.94%), Postives = 289/340 (85.00%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEAIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            LIEN+  +TIR DK+ + GSV+D I+MVLG DSS ANTSL RL+  N  LG+        R  +L+INGKG  TPVADAKTLIEIVWLLPGKKA  FRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTE+GRATQEFLL  REEA+ETFDGMPAGF+YL   DRAQFAKQM E  L++       SKVALKRKRVDD+VQSYRALQDLGV LDGRTLIELRDNVTILSRQDV+VNNAVA+AA +L DSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGK+MK+ YIRKY+LAPDF+ F +R TLFNGRPILE L FERDEDIIEEAIRAVM
Sbjct:  900 LIENMHGATIRVDKNEQVGSVIDTIRMVLGGDSSAANTSLNRLILANEELGT--------RCTQLRINGKGKFTPVADAKTLIEIVWLLPGKKAREFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRATQEFLLGEREEAVETFDGMPAGFRYLPVEDRAQFAKQMLELNLEM-------SKVALKRKRVDDMVQSYRALQDLGVLLDGRTLIELRDNVTILSRQDVMVNNAVAIAAPLLHDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKMMKQMYIRKYELAPDFSGFARRQTLFNGRPILENLYFERDEDIIEEAIRAVM 1224          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: B5LWG1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG1_9PHYC)

HSP 1 Score: 303 bits (775), Expect = 4.210e-98
Identity = 173/351 (49.29%), Postives = 233/351 (66.38%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLD-GREE----------AIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            ++   D+ +IR D  TK+GSV+DVI+ VLGC SS ANT+L  L      LG+         +   +INGKG  TPVADAKTL+EI++LLPG+KA  FRR+S+EKVCRL+GGD+SLV EIE R   L+ST EGRATQ FLL+ G  E           ++ ++GMPAGF +L  +D+ + AK++ +Q L   +          KR+R +D+V  Y+ L D+GV LD RT IE+RDNV++L+++D+ +  +         D TTPTH L A +RG ETGIVVV++K+G+RVP  MSG +GKLMKK Y +KY L+ D++ F KR TLF+GRPI E   + RDEDIIEEAI+  M
Sbjct:    4 IVGYTDNFSIRADATTKKGSVIDVIRSVLGCSSSAANTNLSNLKTRFSDLGN--------NIAHAQINGKGKSTPVADAKTLVEIIFLLPGQKACKFRRKSAEKVCRLMGGDMSLVVEIEQRCTALESTPEGRATQAFLLNPGSSENSSSAPCASAQLKKYEGMPAGFSFLDPSDQCKVAKEVVQQALDGRKXXXXXXXXXXKRQRCEDMVGRYKTLMDIGVKLDDRTKIEIRDNVSLLTKRDLALEGSQDTEICAPIDPTTPTHTLCAGERGHETGIVVVAAKMGVRVPPAMSGAIGKLMKKLYKKKYGLSVDWDDFPKRQTLFHGRPINENCYYARDEDIIEEAIKTKM 346          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: B5LWM3_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM3_9PHYC)

HSP 1 Score: 301 bits (771), Expect = 8.580e-98
Identity = 166/339 (48.97%), Postives = 235/339 (69.32%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGP-GSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLL-DGREEAIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIR 1011
            +++N+ ++TIR D  T++GSV+DVI+MVL CD+S+ANT+ RRL  D   L S    G+ C  L   +INGKG +TPVA+AKTL+EI++ LPGK A  FRR+S+ ++CRLLGGD +LV EIE R A L+ST +GR TQ FLL + R +  + F GMP GF+YL E+ R   A ++                +ALKR+R++D++ SY +L+ LGV LD RT++E+RDNV++L+++ + +         ++ D  TPTH LG ++RG E+GIVVV+SK+G+RVP +MSG +GKLMK  Y +KY L  D+N F KR TL+ GRP++E   +ERDEDII EAI+
Sbjct:    4 IVDNVVNATIRIDNATQKGSVIDVIRMVLRCDASSANTAFRRLKDDM--LKSRAEFGAACSHL---RINGKGRLTPVANAKTLVEIIFSLPGKLAREFRRKSASQICRLLGGDPTLVFEIEQRRAELESTPKGRVTQAFLLGESRHDTDDDFTGMPVGFRYLEESQRRAVAGEVVA--------------LALKRQRIEDMIGSYASLRSLGVELDPRTMVEIRDNVSLLTKRKLSIEEREDSTTRLV-DPKTPTHVLGREERGNESGIVVVASKMGVRVPPSMSGPIGKLMKILYKKKYDLPNDWNDFVKRQTLYLGRPVMENCYYERDEDIITEAIK 322          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: UPI0000161E55 (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E55)

HSP 1 Score: 287 bits (734), Expect = 1.140e-93
Identity = 156/230 (67.83%), Postives = 188/230 (81.74%), Query Frame = 1
Query:  337 LSLVSEIEARHATLQSTEEGRATQEFLLDGREE--AIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            +SLVSEIEARH +LQSTEEGRATQ FLLDGREE  AI++F+GMP  FKY+   DR   AK+M EQ       QLQES VALKR+RVD+L+QSY++L+D+GV+LDGRTLIEL DNVTILSRQD+VV++AV     +L DS+TPTHEL A QRG+ETGIVVVS+KIG+RVPQ++ GTVGKLMKK YI+KY+L+ +F AF KR T+FNGRP LE   + RDEDIIE+AIR VM
Sbjct:    1 MSLVSEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQ-------QLQESTVALKRQRVDNLIQSYKSLRDIGVNLDGRTLIELCDNVTILSRQDLVVSDAVPTPTPLLQDSSTPTHELDAAQRGRETGIVVVSAKIGLRVPQHLCGTVGKLMKKLYIKKYRLSSNFKAFIKRETIFNGRPGLENTYYARDEDIIEQAIREVM 223          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: Q6XM54_9PHYC (FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM54_9PHYC)

HSP 1 Score: 252 bits (643), Expect = 7.640e-77
Identity = 150/347 (43.23%), Postives = 223/347 (64.27%), Query Frame = 1
Query:   10 NIDSSTIRFDKDTKRGSVLDVIKMVLGCDSST-ANTSLRRLLQDNP---GLGSGGPGSRCP-----RLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLL-DGREEAIETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            NI  S IR D++++ GSV+DVIK++    S   A  +L  L+ D+    G       S  P     R+ +++ING+G +TPVADAKTLI I+WLLPG+    FR QS+E + R+LGGDL L  EI+ + A LQ T EGRA Q+F+  D +++ ++ F+       +L  + R + A+Q + ++LK  +Q+ Q  +  LK+K + D++  Y++L+++ V +D RT +E+RD V+IL+RQ     +  +    +  D +TPTH L A++RG+ET IVVVS+K+ +RVP  +SG VGKLM+K YI KYKL  ++N F KR T+ +GRP LE   +ERD DIIEEAIR V+
Sbjct:  117 NIQGS-IRVDEESRMGSVIDVIKLICPEKSEFHAYKTLSNLIDDDDKCIGNKFKSDDSTIPLRLSERVKKIQINGRGRVTPVADAKTLIYIIWLLPGRAVAHFRAQSAEIIARVLGGDLRLAQEIQQQCAKLQETPEGRAFQDFMAPDAKKQKMDMFE-------FLGPSKRVEIAEQFYAEKLKAIQQERQAKEQELKKKSITDIIDVYQSLKNIDVEIDDRTKVEIRDKVSILTRQMEGQGSHASPPLLLCEDPSTPTHVLDAERRGQETNIVVVSAKMNVRVPPALSGKVGKLMRKKYINKYKLPTNWNDFIKRQTILHGRPCLENTYYERDADIIEEAIREVV 455          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC)

HSP 1 Score: 221 bits (563), Expect = 7.900e-66
Identity = 154/369 (41.73%), Postives = 199/369 (53.93%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEAIETFDGM--------PAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSY----RALQDLGVHLDGRTLIELRDNVTILSRQ--------------DVVVNNAVAVAAHILPDSTT----PTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAV 1017
            LIE++D STIR DK+TK GSV+D I+MVL CDSS ANTSL RL+  +PGLG         +  +LK+NG+G  TPVADAKTLIEIVWLLPG++AH FR Q   K+CRLLGGD SLVSEIEARHATL  TEEGRATQEF L+     I+  D +        P+ FK     ++  FA  M  + +                  V + V+ Y      L+ +G     R +IE  D V    R+              D VV +AVA       DS T     T E     RG ET I   ++K+GI V +   G +GK + + Y ++Y +    N   KR T + G+P  E   + RD D+++EAIR V
Sbjct:   21 LIESMDGSTIRVDKNTKLGSVIDTIRMVLECDSSNANTSLGRLVLSHPGLGE--------KYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAI------------------VSEEVEMYDFCKAKLESVG-QFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEK-GGEIGKELIRRYTKRYGVEAGLN-IPKRPTTYRGKPFNENCYWSRDADLVQEAIRIV 360          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: Q6XLT8_9PHYC (FirrV-1-K1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT8_9PHYC)

HSP 1 Score: 211 bits (537), Expect = 1.100e-61
Identity = 134/305 (43.93%), Postives = 183/305 (60.00%), Query Frame = 1
Query:  181 RLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEA-IETF-DGMPAGFKYLA----EADRAQFAKQMFEQRLKLGEQQLQESKVALKR--------------KRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSR---QDVVVNNAVAVAAHI--LPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            R+  +KINGKG+ TPVAD  TL+EI+WL+PG     FR  S+E + R LGGDL+   EI   H  LQ T EGR  Q+F+L  R++A +E+  D     +  L+      ++++  K++  Q+LK  +                          K ++ L+ +Y++L+DLGV LD RT +ELRDNV+I+++   +D VV  AV     I    D + PTHELG D+RG+E+GIV VS  IG+RVPQ MSG VGK MKK Y+ KYKL   +N F KR TLF GRPI E + F RD+DII +AIR V+
Sbjct:   93 RVKSIKINGKGHTTPVADVATLVEIIWLIPGSAVRQFRAHSAEALVRALGGDLAHAREIAEHHIKLQETPEGREFQDFMLPDRKKARVESVPDTRSENYILLSLVTDPKEKSEMVKKIINQQLKNRDVXXXXXXXXXXXXXXXXXXXXXXXXGKSINRLIGTYQSLKDLGVTLDERTFMELRDNVSIINKVHTKDRVVP-AVTGGGGIDRTVDPSVPTHELGPDERGEESGIVPVSIHIGVRVPQGMSGVVGKRMKKLYVEKYKLESGWNDFVKRRTLFRGRPITENVYFARDDDIIAQAIREVV 396          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: B5LWF8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF8_9PHYC)

HSP 1 Score: 203 bits (517), Expect = 1.060e-60
Identity = 115/249 (46.18%), Postives = 168/249 (67.47%), Query Frame = 1
Query:    1 LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLL-DGREEA----------IETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNA 714
            ++ N++SS+IR DK +K+GSV+D +KMVLGC SS+ NT+LRRL    P L        C  + RL+INGKG  TPVADAK L+++V LLPG+KA  FRR+S++ VCRLLGGD+SLV EIE R ATLQ + EGR  Q+ LL DG  +           I+ ++GMPAGF++L  +D+ + AK++ +Q L   +Q       ALKR+R +D+V   ++L D+GV LD +T  ++RDN+++L++ D+ +  +
Sbjct:    4 IVRNMESSSIRVDKASKKGSVIDTVKMVLGCTSSSGNTNLRRLTTRFPDL--------CVDITRLRINGKGMATPVADAKLLVQVVLLLPGQKAIEFRRKSADVVCRLLGGDMSLVKEIEQRCATLQRSPEGRVIQDILLGDGDADRSVVTSSTSSQIDKYEGMPAGFRFLDASDQHRVAKEVVKQALDCKKQ-------ALKRRRCEDMVDQCKSLSDIGVDLDNQTKKDIRDNLSLLTKGDLALEGS 237          
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Match: A0A835Z3L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 7.250e-55
Identity = 129/338 (38.17%), Postives = 191/338 (56.51%), Query Frame = 1
Query:   19 SSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGLGSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEAI--ETFDGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLVQSYRALQDLGVHLDGRTLIELRDNV--TILSRQDVVVNNAVAVAAHILPDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKLAPDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM 1020
            ++ IR D  T +GSV+DVIK+V  C++S A+T  +RLL D   +G+   G+RC +L   +IN KG +TP ADAKTL+EIVW LPGK A  FRRQS+  VCR+LGGDLS+V E+EARH  LQ TE GRA Q+FLL+  E ++  E   G+P       E  ++ +    FE R++      +E+ +A K+ R    V+ Y  L+ +G   D R  I   D V   +       V  A A+AA    D T PT +     RG+E  +  V+ ++ +++P+   G +GK MK  Y  +Y  A   N  T+ +  F G+       + RD D+++ A+++V+
Sbjct:    7 TAAIRVDTATNKGSVIDVIKIVQSCNASDASTYCKRLLDD---IGTD-LGTRCVQL---RINSKGRLTPCADAKTLVEIVWSLPGKAAREFRRQSAANVCRVLGGDLSIVQEVEARHHALQQTEGGRAAQKFLLEDSESSVGGEMISGLPLELALANETQKSAY----FEARMR------EEAAIATKKARAQFAVEGYELLRSMGA-ADHRDCITFSDAVRRAVTDGGGAAVVEARALAAD---DPTIPTPQCDPFYRGEEISMHTVAHEMRVKIPEQGEGRIGKRMKALYTERYGDAAAANIPTRNIE-FRGQIWPANSYWARDADLMKRAVQSVL 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12.1707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP49_ECTSI5.580e-16072.35EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JW74_9PHAE1.260e-15977.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5LWG1_9PHYC4.210e-9849.29Uncharacterized protein n=1 Tax=Feldmannia species... [more]
B5LWM3_9PHYC8.580e-9848.97Uncharacterized protein n=1 Tax=Feldmannia species... [more]
UPI0000161E551.140e-9367.83EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculos... [more]
Q6XM54_9PHYC7.640e-7743.23FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWM4_9PHYC7.900e-6641.73Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XLT8_9PHYC1.100e-6143.93FirrV-1-K1 n=1 Tax=Feldmannia irregularis virus a ... [more]
B5LWF8_9PHYC1.060e-6046.18Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A835Z3L4_9STRA7.250e-5538.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12contigEcto-sp13_S_contig12:41245..42264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score459.1
Seed ortholog evalue1.7e-126
Seed eggNOG ortholog2880.D8LP49
Model size1020
Hectar predicted targeting categoryother localisation
Exons1
EggNOG OGs2EUDG@1,2SWJG@2759
Cds size1020
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462637.015269-CDS-Ecto-sp13_S_contig12:41244..422641681462637.015269-CDS-Ecto-sp13_S_contig12:41244..42264Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12 41245..42264 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12.1707.1prot_Ecto-sp13_S_contig12.1707.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12 41245..42264 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12.1707.1

>prot_Ecto-sp13_S_contig12.1707.1 ID=prot_Ecto-sp13_S_contig12.1707.1|Name=mRNA_Ecto-sp13_S_contig12.1707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp
LIENIDSSTIRFDKDTKRGSVLDVIKMVLGCDSSTANTSLRRLLQDNPGL
GSGGPGSRCPRLPRLKINGKGNMTPVADAKTLIEIVWLLPGKKAHTFRRQ
SSEKVCRLLGGDLSLVSEIEARHATLQSTEEGRATQEFLLDGREEAIETF
DGMPAGFKYLAEADRAQFAKQMFEQRLKLGEQQLQESKVALKRKRVDDLV
QSYRALQDLGVHLDGRTLIELRDNVTILSRQDVVVNNAVAVAAHILPDST
TPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKLMKKSYIRKYKL
APDFNAFTKRLTLFNGRPILEILCFERDEDIIEEAIRAVM
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mRNA from alignment at Ecto-sp13_S_contig12:41245..42264+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12.1707.1 ID=mRNA_Ecto-sp13_S_contig12.1707.1|Name=mRNA_Ecto-sp13_S_contig12.1707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12:41245..42264+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCATTGAAAACATTGACAGCTCAACCATCCGTTTTGACAAAGACACCAA GAGGGGGAGCGTGCTGGATGTTATCAAAATGGTCTTGGGTTGTGACTCGA GTACTGCAAACACTTCCTTGAGGCGACTACTTCAAGACAACCCTGGACTG GGGTCTGGTGGTCCAGGGTCTCGGTGCCCCCGGTTGCCCAGGTTGAAAAT CAATGGCAAAGGCAACATGACCCCAGTGGCCGACGCCAAAACACTGATAG AAATCGTTTGGCTCCTCCCTGGCAAGAAAGCACACACATTCCGTCGCCAG TCATCTGAAAAAGTCTGCCGTCTCCTCGGTGGAGACTTGTCCCTCGTGTC CGAGATCGAGGCCCGTCACGCCACCCTGCAGAGCACCGAAGAGGGTCGCG CCACCCAAGAATTTCTCCTCGACGGACGCGAGGAGGCAATTGAAACGTTT GATGGCATGCCGGCTGGCTTCAAGTACCTGGCTGAGGCAGACCGCGCACA GTTCGCCAAACAAATGTTCGAACAGCGACTCAAACTTGGCGAACAGCAAC TGCAGGAGAGCAAGGTGGCCCTCAAACGAAAGAGGGTAGACGACCTCGTC CAAAGCTACAGAGCACTGCAAGACCTTGGTGTCCATCTCGACGGGCGTAC TCTGATCGAGTTGCGCGACAACGTGACAATCCTCAGTCGCCAAGACGTCG TAGTCAACAACGCGGTGGCTGTCGCCGCTCATATACTACCGGACTCCACC ACGCCCACACACGAGCTTGGCGCCGATCAGCGGGGAAAAGAGACGGGAAT CGTGGTCGTGTCCTCTAAAATTGGGATCAGGGTTCCCCAGAACATGTCTG GAACAGTTGGTAAACTGATGAAAAAGTCGTATATCAGGAAATACAAGCTT GCTCCCGATTTCAACGCTTTCACCAAGAGGCTGACGCTGTTCAATGGCCG GCCAATTCTGGAGATATTGTGCTTTGAAAGAGACGAGGACATCATCGAGG AAGCGATCAGGGCAGTTATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12:41245..42264+

>mRNA_Ecto-sp13_S_contig12.1707.1 ID=mRNA_Ecto-sp13_S_contig12.1707.1|Name=mRNA_Ecto-sp13_S_contig12.1707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12:41245..42264+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCATTGAAAACATTGACAGCTCAACCATCCGTTTTGACAAAGACACCAA
GAGGGGGAGCGTGCTGGATGTTATCAAAATGGTCTTGGGTTGTGACTCGA
GTACTGCAAACACTTCCTTGAGGCGACTACTTCAAGACAACCCTGGACTG
GGGTCTGGTGGTCCAGGGTCTCGGTGCCCCCGGTTGCCCAGGTTGAAAAT
CAATGGCAAAGGCAACATGACCCCAGTGGCCGACGCCAAAACACTGATAG
AAATCGTTTGGCTCCTCCCTGGCAAGAAAGCACACACATTCCGTCGCCAG
TCATCTGAAAAAGTCTGCCGTCTCCTCGGTGGAGACTTGTCCCTCGTGTC
CGAGATCGAGGCCCGTCACGCCACCCTGCAGAGCACCGAAGAGGGTCGCG
CCACCCAAGAATTTCTCCTCGACGGACGCGAGGAGGCAATTGAAACGTTT
GATGGCATGCCGGCTGGCTTCAAGTACCTGGCTGAGGCAGACCGCGCACA
GTTCGCCAAACAAATGTTCGAACAGCGACTCAAACTTGGCGAACAGCAAC
TGCAGGAGAGCAAGGTGGCCCTCAAACGAAAGAGGGTAGACGACCTCGTC
CAAAGCTACAGAGCACTGCAAGACCTTGGTGTCCATCTCGACGGGCGTAC
TCTGATCGAGTTGCGCGACAACGTGACAATCCTCAGTCGCCAAGACGTCG
TAGTCAACAACGCGGTGGCTGTCGCCGCTCATATACTACCGGACTCCACC
ACGCCCACACACGAGCTTGGCGCCGATCAGCGGGGAAAAGAGACGGGAAT
CGTGGTCGTGTCCTCTAAAATTGGGATCAGGGTTCCCCAGAACATGTCTG
GAACAGTTGGTAAACTGATGAAAAAGTCGTATATCAGGAAATACAAGCTT
GCTCCCGATTTCAACGCTTTCACCAAGAGGCTGACGCTGTTCAATGGCCG
GCCAATTCTGGAGATATTGTGCTTTGAAAGAGACGAGGACATCATCGAGG
AAGCGATCAGGGCAGTTATG
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